RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 SCAMP3O14828 347 aaKnown RBP9.9□□□□□ -0.82
VMP1-213ENST00000591877 KHNYNO15037 678 aaKnown RBP9.9□□□□□ -0.82
VMP1-213ENST00000591877 TNP2Q05952 138 aa9.9□□□□□ -0.82
VMP1-213ENST00000591877 DDX10Q13206 875 aaKnown RBP9.9□□□□□ -0.82
VMP1-213ENST00000591877 NFIXQ14938 502 aa9.9□□□□□ -0.82
VMP1-213ENST00000591877 HIF1AQ16665 826 aa9.9□□□□□ -0.82
VMP1-213ENST00000591877 TSNAXIP1Q2TAA8 658 aa9.9□□□□□ -0.82
VMP1-213ENST00000591877 TMC4Q7Z404 712 aa9.9□□□□□ -0.82
VMP1-213ENST00000591877 AIDAQ96BJ3 306 aa9.9□□□□□ -0.82
VMP1-213ENST00000591877 FMNL2Q96PY5 1086 aa9.9□□□□□ -0.82
VMP1-213ENST00000591877 USP16Q9Y5T5 823 aa9.9□□□□□ -0.82
VMP1-213ENST00000591877 BCORQ6W2J9 1755 aa9.9□□□□□ -0.82
VMP1-213ENST00000591877 DLEC1Q9Y238 1755 aa9.9□□□□□ -0.82
VMP1-213ENST00000591877 ADCY9O60503 1353 aa9.89□□□□□ -0.83
VMP1-213ENST00000591877 ANKRD31Q8N7Z5 1873 aa9.89□□□□□ -0.83
VMP1-213ENST00000591877 ZBTB39O15060 712 aa9.89□□□□□ -0.83
VMP1-213ENST00000591877 HTATSF1O43719 755 aaKnown RBP9.89□□□□□ -0.83
VMP1-213ENST00000591877 STARD3NLO95772 234 aa9.89□□□□□ -0.83
VMP1-213ENST00000591877 A1BGP04217 495 aa9.89□□□□□ -0.83
VMP1-213ENST00000591877 RPLP1P05386 114 aaKnown RBP9.89□□□□□ -0.83
VMP1-213ENST00000591877 ATP4AP20648 1035 aa9.89□□□□□ -0.83
VMP1-213ENST00000591877 MAPK8P45983 427 aa9.89□□□□□ -0.83
VMP1-213ENST00000591877 DGKZQ13574 1117 aa9.89□□□□□ -0.83
VMP1-213ENST00000591877 ENOX2Q16206 610 aaKnown RBP9.89□□□□□ -0.83
VMP1-213ENST00000591877 PRSS36Q5K4E3 855 aa9.89□□□□□ -0.83
VMP1-213ENST00000591877 NLRP8Q86W28 1048 aa9.89□□□□□ -0.83
VMP1-213ENST00000591877 TEX13AQ9BXU3 409 aaPredicted RBP9.89□□□□□ -0.83
VMP1-213ENST00000591877 FAM13BQ9NYF5 915 aa9.89□□□□□ -0.83
VMP1-213ENST00000591877 GPC6Q9Y625 555 aaPredicted RBP9.89□□□□□ -0.83
VMP1-213ENST00000591877 LAMB4A4D0S4 1761 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 PCSK2P16519 638 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 CHRNA5P30532 468 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 ALG1LQ6GMV1 187 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 ETFBKMTQ8IXQ9 262 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 FBF1Q8TES7 1133 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 RTF1Q92541 710 aaKnown RBP9.88□□□□□ -0.83
VMP1-213ENST00000591877 BACH2Q9BYV9 841 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 PHACTR1Q9C0D0 580 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 AVENQ9NQS1 362 aaPredicted RBP9.88□□□□□ -0.83
VMP1-213ENST00000591877 PRR12Q9ULL5 1215 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 POLIQ9UNA4 740 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 BCS1LQ9Y276 419 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 ATP10DQ9P241 1426 aa9.88□□□□□ -0.83
VMP1-213ENST00000591877 SBF1O95248 1867 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 FAM229AH3BQW9 127 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 PDGFAP04085 211 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 IL6STP40189 918 aaPredicted RBP9.87□□□□□ -0.83
VMP1-213ENST00000591877 ZAP70P43403 619 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 PIP4K2AP48426 406 aaPredicted RBP9.87□□□□□ -0.83
VMP1-213ENST00000591877 DAB2P98082 770 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 RALBP1Q15311 655 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 TAF7Q15545 349 aaPredicted RBP9.87□□□□□ -0.83
VMP1-213ENST00000591877 PRRT3Q5FWE3 981 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 SH3PXD2AQ5TCZ1 1133 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 IFT43Q96FT9 208 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 MRS2Q9HD23 443 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 MIS18AQ9NYP9 233 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 CARMIL3Q8ND23 1372 aa9.87□□□□□ -0.83
VMP1-213ENST00000591877 A0A087WZG4 1122 aa9.86□□□□□ -0.83
VMP1-213ENST00000591877 A0A1W2PNR3 127 aa9.86□□□□□ -0.83
VMP1-213ENST00000591877 SERPINB2P05120 415 aa9.86□□□□□ -0.83
VMP1-213ENST00000591877 NFE2L2Q16236 605 aa9.86□□□□□ -0.83
VMP1-213ENST00000591877 FAM26DQ5JW98 314 aa9.86□□□□□ -0.83
VMP1-213ENST00000591877 TBC1D9BQ66K14 1250 aa9.86□□□□□ -0.83
VMP1-213ENST00000591877 ATCAYQ86WG3 371 aa9.86□□□□□ -0.83
VMP1-213ENST00000591877 DUSP9Q99956 384 aaKnown RBP9.86□□□□□ -0.83
VMP1-213ENST00000591877 THUMPD2Q9BTF0 503 aaKnown RBP9.86□□□□□ -0.83
VMP1-213ENST00000591877 PARP2Q9UGN5 583 aa9.86□□□□□ -0.83
VMP1-213ENST00000591877 HCN4Q9Y3Q4 1203 aa9.86□□□□□ -0.83
VMP1-213ENST00000591877 COL11A2P13942 1736 aaPredicted RBP9.85□□□□□ -0.83
VMP1-213ENST00000591877 CAMTA2O94983 1202 aa9.85□□□□□ -0.83
VMP1-213ENST00000591877 NEFLP07196 543 aa9.85□□□□□ -0.83
VMP1-213ENST00000591877 SNRPA1P09661 255 aaKnown RBP9.85□□□□□ -0.83
VMP1-213ENST00000591877 C1QTNF8P60827 252 aa9.85□□□□□ -0.83
VMP1-213ENST00000591877 ARSJQ5FYB0 599 aaPredicted RBP9.85□□□□□ -0.83
VMP1-213ENST00000591877 BICDL1Q6ZP65 573 aa9.85□□□□□ -0.83
VMP1-213ENST00000591877 EDEM1Q92611 657 aa9.85□□□□□ -0.83
VMP1-213ENST00000591877 FRMD6Q96NE9 622 aa9.85□□□□□ -0.83
VMP1-213ENST00000591877 METTL5Q9NRN9 209 aaKnown RBP9.85□□□□□ -0.83
VMP1-213ENST00000591877 ZDHHC3Q9NYG2 299 aa9.85□□□□□ -0.83
VMP1-213ENST00000591877 PIM2Q9P1W9 311 aa9.85□□□□□ -0.83
VMP1-213ENST00000591877 SORBS3O60504 671 aa9.84□□□□□ -0.83
VMP1-213ENST00000591877 DNM1Q05193 864 aaKnown RBP9.84□□□□□ -0.83
VMP1-213ENST00000591877 ZNF468Q5VIY5 522 aaPredicted RBP9.84□□□□□ -0.83
VMP1-213ENST00000591877 ARHGAP27Q6ZUM4 889 aa9.84□□□□□ -0.83
VMP1-213ENST00000591877 SREK1Q8WXA9 508 aaKnown RBP9.84□□□□□ -0.83
VMP1-213ENST00000591877 NIF3L1Q9GZT8 377 aa9.84□□□□□ -0.83
VMP1-213ENST00000591877 KLK14Q9P0G3 267 aa9.84□□□□□ -0.83
VMP1-213ENST00000591877 CCDC88AQ3V6T2 1871 aa9.84□□□□□ -0.83
VMP1-213ENST00000591877 MYBBP1AQ9BQG0 1328 aaKnown RBP9.83□□□□□ -0.84
VMP1-213ENST00000591877 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
VMP1-213ENST00000591877 PNMA6FA0A0J9YX94 578 aa9.83□□□□□ -0.84
VMP1-213ENST00000591877 SPDYE3A6NKU9 549 aa9.83□□□□□ -0.84
VMP1-213ENST00000591877 NEFMP07197 916 aa9.83□□□□□ -0.84
VMP1-213ENST00000591877 EIF4A1P60842 406 aaKnown RBP9.83□□□□□ -0.84
VMP1-213ENST00000591877 PSMD2Q13200 908 aa9.83□□□□□ -0.84
VMP1-213ENST00000591877 DALRD3Q5D0E6 543 aaKnown RBP9.83□□□□□ -0.84
VMP1-213ENST00000591877 IER5Q5VY09 327 aa9.83□□□□□ -0.84
VMP1-213ENST00000591877 PRR5LQ6MZQ0 368 aa9.83□□□□□ -0.84
VMP1-213ENST00000591877 KRTAP19-1Q8IUB9 90 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms