RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 IFNL1Q8IU54 200 aa16.69■□□□□ 0.26
MBD1-225ENST00000591535 CLEC10AQ8IUN9 316 aa16.69■□□□□ 0.26
MBD1-225ENST00000591535 TBC1D10CQ8IV04 446 aa16.69■□□□□ 0.26
MBD1-225ENST00000591535 NBPF3Q9H094 633 aa16.69■□□□□ 0.26
MBD1-225ENST00000591535 KANSL2Q9H9L4 492 aa16.69■□□□□ 0.26
MBD1-225ENST00000591535 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.69■□□□□ 0.26
MBD1-225ENST00000591535 A0A0G2JLL6 359 aaPredicted RBP16.68■□□□□ 0.26
MBD1-225ENST00000591535 TESPA1A2RU30 521 aaPredicted RBP16.68■□□□□ 0.26
MBD1-225ENST00000591535 ORC4O43929 436 aa16.68■□□□□ 0.26
MBD1-225ENST00000591535 TRPA1O75762 1119 aa16.68■□□□□ 0.26
MBD1-225ENST00000591535 PCP11498 1178 aaKnown RBP16.68■□□□□ 0.26
MBD1-225ENST00000591535 BACE1P56817 501 aa16.68■□□□□ 0.26
MBD1-225ENST00000591535 PRRT2Q7Z6L0 340 aaPredicted RBP16.68■□□□□ 0.26
MBD1-225ENST00000591535 ACER1Q8TDN7 264 aa16.68■□□□□ 0.26
MBD1-225ENST00000591535 STAG1Q8WVM7 1258 aa16.68■□□□□ 0.26
MBD1-225ENST00000591535 PTPN18Q99952 460 aa16.68■□□□□ 0.26
MBD1-225ENST00000591535 ARHGEF10LQ9HCE6 1279 aa16.68■□□□□ 0.26
MBD1-225ENST00000591535 WBP1LQ9NX94 342 aa16.68■□□□□ 0.26
MBD1-225ENST00000591535 TMOD4Q9NZQ9 345 aa16.68■□□□□ 0.26
MBD1-225ENST00000591535 TACC3Q9Y6A5 838 aa16.68■□□□□ 0.26
MBD1-225ENST00000591535 C19orf81C9J6K1 198 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
MBD1-225ENST00000591535 FGRP09769 529 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 RNF186Q9NXI6 227 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 PTPRFP10586 1907 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 BTBD19C9JJ37 291 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 REC8O95072 547 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 ALDH1A1P00352 501 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 CYP21A2P08686 494 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 EEF2P13639 858 aaKnown RBP16.67■□□□□ 0.26
MBD1-225ENST00000591535 DGKZQ13574 1117 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 NEDD1Q8NHV4 660 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 ESR2Q92731 530 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.67■□□□□ 0.26
MBD1-225ENST00000591535 SH2D4AQ9H788 454 aa16.67■□□□□ 0.26
MBD1-225ENST00000591535 NEDD4P46934 1319 aa16.66■□□□□ 0.26
MBD1-225ENST00000591535 RAD21O60216 631 aa16.66■□□□□ 0.26
MBD1-225ENST00000591535 HSPA1AP0DMV8 641 aaKnown RBP16.66■□□□□ 0.26
MBD1-225ENST00000591535 HSPA1BP0DMV9 641 aaKnown RBP16.66■□□□□ 0.26
MBD1-225ENST00000591535 USP14P54578 494 aa16.66■□□□□ 0.26
MBD1-225ENST00000591535 TRDNQ13061 729 aa16.66■□□□□ 0.26
MBD1-225ENST00000591535 USP17L2Q6R6M4 530 aa16.66■□□□□ 0.26
MBD1-225ENST00000591535 FAM43AQ8N2R8 423 aa16.66■□□□□ 0.26
MBD1-225ENST00000591535 KRT23Q9C075 422 aa16.66■□□□□ 0.26
MBD1-225ENST00000591535 CNNM2Q9H8M5 875 aa16.66■□□□□ 0.26
MBD1-225ENST00000591535 A0A1W2PRG0 241 aa16.65■□□□□ 0.26
MBD1-225ENST00000591535 CA12O43570 354 aa16.65■□□□□ 0.26
MBD1-225ENST00000591535 MOGSQ13724 837 aa16.65■□□□□ 0.26
MBD1-225ENST00000591535 RNF20Q5VTR2 975 aa16.65■□□□□ 0.26
MBD1-225ENST00000591535 ANKRD23Q86SG2 305 aa16.65■□□□□ 0.26
MBD1-225ENST00000591535 PROCA1Q8NCQ7 364 aaPredicted RBP16.65■□□□□ 0.26
MBD1-225ENST00000591535 CEP95Q96GE4 821 aa16.65■□□□□ 0.26
MBD1-225ENST00000591535 CLIP2Q9UDT6 1046 aa16.65■□□□□ 0.26
MBD1-225ENST00000591535 TSKSQ9UJT2 592 aa16.65■□□□□ 0.26
MBD1-225ENST00000591535 STX8Q9UNK0 236 aa16.65■□□□□ 0.26
MBD1-225ENST00000591535 B4E1Z4 1266 aa16.64■□□□□ 0.25
MBD1-225ENST00000591535 PDHXO00330 501 aa16.64■□□□□ 0.25
MBD1-225ENST00000591535 KDM4AO75164 1064 aa16.64■□□□□ 0.25
MBD1-225ENST00000591535 TAF1CQ15572 869 aaPredicted RBP16.64■□□□□ 0.25
MBD1-225ENST00000591535 SH3D19Q5HYK7 790 aa16.64■□□□□ 0.25
MBD1-225ENST00000591535 SIAH1Q8IUQ4 282 aa16.64■□□□□ 0.25
MBD1-225ENST00000591535 KIAA1683Q9H0B3 1180 aa16.64■□□□□ 0.25
MBD1-225ENST00000591535 EMILIN3Q9NT22 766 aa16.64■□□□□ 0.25
MBD1-225ENST00000591535 MTMR4Q9NYA4 1195 aa16.64■□□□□ 0.25
MBD1-225ENST00000591535 GREB1LQ9C091 1923 aaPredicted RBP16.64■□□□□ 0.25
MBD1-225ENST00000591535 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 E7EWF7 191 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 SLC27A2O14975 620 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 NMT2O60551 498 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 TBC1D8O95759 1140 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 TTLL1O95922 423 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 PABPC4Q13310 644 aaKnown RBP eCLIP16.63■□□□□ 0.25
MBD1-225ENST00000591535 PPP4R3BQ5MIZ7 849 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 TREML2Q5T2D2 321 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 CREB3L3Q68CJ9 461 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 GPAT2Q6NUI2 795 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 RALYLQ86SE5 291 aaKnown RBP16.63■□□□□ 0.25
MBD1-225ENST00000591535 SAGE1Q9NXZ1 904 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 NYAP2Q9P242 653 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 AGTPBP1Q9UPW5 1226 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 TMX2Q9Y320 296 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 MYH4Q9Y623 1939 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 ZKSCAN3Q9BRR0 538 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 GOPCQ9HD26 462 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 IL17RBQ9NRM6 502 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 TAF6LQ9Y6J9 622 aa16.63■□□□□ 0.25
MBD1-225ENST00000591535 PLIN4Q96Q06 1357 aa16.62■□□□□ 0.25
MBD1-225ENST00000591535 NT5C2P49902 561 aa16.62■□□□□ 0.25
MBD1-225ENST00000591535 IQCA1Q86XH1 822 aa16.62■□□□□ 0.25
MBD1-225ENST00000591535 SPICE1Q8N0Z3 855 aa16.62■□□□□ 0.25
MBD1-225ENST00000591535 NCOA7Q8NI08 942 aa16.62■□□□□ 0.25
MBD1-225ENST00000591535 VCPKMTQ9H867 229 aa16.62■□□□□ 0.25
MBD1-225ENST00000591535 ZFYVE28Q9HCC9 887 aa16.62■□□□□ 0.25
MBD1-225ENST00000591535 ZCCHC17Q9NP64 241 aaKnown RBP16.62■□□□□ 0.25
MBD1-225ENST00000591535 ZSWIM5Q9P217 1185 aa16.62■□□□□ 0.25
MBD1-225ENST00000591535 LOC285556D6RIA3 1793 aa16.61■□□□□ 0.25
MBD1-225ENST00000591535 FOXN1O15353 648 aa16.61■□□□□ 0.25
MBD1-225ENST00000591535 ZKSCAN1P17029 563 aaPredicted RBP16.61■□□□□ 0.25
MBD1-225ENST00000591535 OSBPP22059 807 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms