RNA–Protein interactions for RNA: ENST00000589737.5

POLR2E-206, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-206ENST00000589737 CNMDO75829 334 aa18.4■□□□□ 0.54
POLR2E-206ENST00000589737 COL6A1P12109 1028 aa18.4■□□□□ 0.54
POLR2E-206ENST00000589737 USP5P45974 858 aa18.4■□□□□ 0.54
POLR2E-206ENST00000589737 CCL14Q16627 93 aa18.4■□□□□ 0.54
POLR2E-206ENST00000589737 PLEKHH3Q7Z736 793 aa18.4■□□□□ 0.54
POLR2E-206ENST00000589737 ITPRIPQ8IWB1 547 aa18.4■□□□□ 0.54
POLR2E-206ENST00000589737 FEZ1Q99689 392 aa18.4■□□□□ 0.54
POLR2E-206ENST00000589737 NDUFB9Q9Y6M9 179 aa18.4■□□□□ 0.54
POLR2E-206ENST00000589737 SYN1P17600 705 aa18.39■□□□□ 0.53
POLR2E-206ENST00000589737 CCND3P30281 292 aaPredicted RBP18.39■□□□□ 0.53
POLR2E-206ENST00000589737 ZYXQ15942 572 aaKnown RBP18.39■□□□□ 0.53
POLR2E-206ENST00000589737 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.53
POLR2E-206ENST00000589737 KIAA1683Q9H0B3 1180 aa18.39■□□□□ 0.53
POLR2E-206ENST00000589737 ANTXR1Q9H6X2 564 aa18.39■□□□□ 0.53
POLR2E-206ENST00000589737 RABGAP1Q9Y3P9 1069 aa18.39■□□□□ 0.53
POLR2E-206ENST00000589737 ZNFX1Q9P2E3 1918 aaKnown RBP18.39■□□□□ 0.53
POLR2E-206ENST00000589737 COL11A1P12107 1806 aaPredicted RBP18.38■□□□□ 0.53
POLR2E-206ENST00000589737 USP17L15C9J2P7 530 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 USP17L13C9JLJ4 530 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 USP17L11C9JVI0 530 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 USP17L18D6R9N7 530 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 USP17L22D6RA61 530 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 USP17L17D6RBQ6 530 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 USP17L19D6RCP7 530 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 USP17L20D6RJB6 530 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 VCAM1P19320 739 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 MAGEA10P43363 369 aaPredicted RBP18.38■□□□□ 0.53
POLR2E-206ENST00000589737 USP14P54578 494 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 USP17L24Q0WX57 530 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 MAP2K5Q13163 448 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 LHX8Q68G74 356 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 CEP85Q6P2H3 762 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 LBX2Q6XYB7 198 aa18.38■□□□□ 0.53
POLR2E-206ENST00000589737 CCAR1Q8IX12 1150 aaKnown RBP18.38■□□□□ 0.53
POLR2E-206ENST00000589737 SHMT1P34896 483 aa18.37■□□□□ 0.53
POLR2E-206ENST00000589737 CCNA1P78396 465 aa18.37■□□□□ 0.53
POLR2E-206ENST00000589737 MAP3K12Q12852 859 aa18.37■□□□□ 0.53
POLR2E-206ENST00000589737 GPR153Q6NV75 609 aa18.37■□□□□ 0.53
POLR2E-206ENST00000589737 CATSPERGQ6ZRH7 1159 aa18.37■□□□□ 0.53
POLR2E-206ENST00000589737 TTC6Q86TZ1 520 aa18.37■□□□□ 0.53
POLR2E-206ENST00000589737 ACER1Q8TDN7 264 aa18.37■□□□□ 0.53
POLR2E-206ENST00000589737 RIOK1Q9BRS2 568 aaKnown RBP18.37■□□□□ 0.53
POLR2E-206ENST00000589737 DNAH12Q6ZR08 3092 aa18.36■□□□□ 0.53
POLR2E-206ENST00000589737 RAB3GAP1Q15042 981 aa18.36■□□□□ 0.53
POLR2E-206ENST00000589737 ABCB5Q2M3G0 1257 aa18.36■□□□□ 0.53
POLR2E-206ENST00000589737 CERKLQ49MI3 558 aaPredicted RBP18.36■□□□□ 0.53
POLR2E-206ENST00000589737 EXOC6BQ9Y2D4 811 aa18.36■□□□□ 0.53
POLR2E-206ENST00000589737 CUL9Q8IWT3 2517 aa18.35■□□□□ 0.53
POLR2E-206ENST00000589737 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
POLR2E-206ENST00000589737 LRIT3Q3SXY7 679 aa18.35■□□□□ 0.53
POLR2E-206ENST00000589737 AACSQ86V21 672 aa18.35■□□□□ 0.53
POLR2E-206ENST00000589737 ERC1Q8IUD2 1116 aa18.35■□□□□ 0.53
POLR2E-206ENST00000589737 TDHQ8IZJ6 230 aa18.35■□□□□ 0.53
POLR2E-206ENST00000589737 CWC22Q9HCG8 908 aaKnown RBP18.35■□□□□ 0.53
POLR2E-206ENST00000589737 FLRT1Q9NZU1 646 aa18.35■□□□□ 0.53
POLR2E-206ENST00000589737 PLXNA1Q9UIW2 1896 aa18.35■□□□□ 0.53
POLR2E-206ENST00000589737 SLC15A5A6NIM6 579 aa18.34■□□□□ 0.53
POLR2E-206ENST00000589737 SPDYE16A6NNV3 312 aaPredicted RBP18.34■□□□□ 0.53
POLR2E-206ENST00000589737 GLRX3O76003 335 aaKnown RBP18.34■□□□□ 0.53
POLR2E-206ENST00000589737 HOXC6P09630 235 aa18.34■□□□□ 0.53
POLR2E-206ENST00000589737 PTPREP23469 700 aa18.34■□□□□ 0.53
POLR2E-206ENST00000589737 PLCD1P51178 756 aa18.34■□□□□ 0.53
POLR2E-206ENST00000589737 GABPAQ06546 454 aa18.34■□□□□ 0.53
POLR2E-206ENST00000589737 GRB14Q14449 540 aa18.34■□□□□ 0.53
POLR2E-206ENST00000589737 LRRC26Q2I0M4 334 aa18.34■□□□□ 0.53
POLR2E-206ENST00000589737 BTBD7Q9P203 1132 aa18.34■□□□□ 0.53
POLR2E-206ENST00000589737 WDR78Q5VTH9 848 aa18.33■□□□□ 0.52
POLR2E-206ENST00000589737 EDC3Q96F86 508 aaKnown RBP18.33■□□□□ 0.52
POLR2E-206ENST00000589737 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.52
POLR2E-206ENST00000589737 CABP5Q9NP86 173 aa18.33■□□□□ 0.52
POLR2E-206ENST00000589737 SMCHD1A6NHR9 2005 aa18.32■□□□□ 0.52
POLR2E-206ENST00000589737 MAGEB6P1A0A0J9YX57 407 aa18.32■□□□□ 0.52
POLR2E-206ENST00000589737 PDE6AP16499 860 aa18.32■□□□□ 0.52
POLR2E-206ENST00000589737 SEPT2Q15019 361 aa18.32■□□□□ 0.52
POLR2E-206ENST00000589737 MFSD14CQ5VZR4 134 aa18.32■□□□□ 0.52
POLR2E-206ENST00000589737 SLC17A8Q8NDX2 589 aa18.32■□□□□ 0.52
POLR2E-206ENST00000589737 UBE2OQ9C0C9 1292 aaKnown RBP18.32■□□□□ 0.52
POLR2E-206ENST00000589737 A0A0C4DFX4 3053 aa18.32■□□□□ 0.52
POLR2E-206ENST00000589737 IGHA2P01877 340 aa18.31■□□□□ 0.52
POLR2E-206ENST00000589737 POLR3DP05423 398 aaPredicted RBP18.31■□□□□ 0.52
POLR2E-206ENST00000589737 HNRNPUQ00839 825 aaKnown RBP eCLIP18.31■□□□□ 0.52
POLR2E-206ENST00000589737 EVX2Q03828 476 aa18.31■□□□□ 0.52
POLR2E-206ENST00000589737 TTF1Q15361 905 aaPredicted RBP18.31■□□□□ 0.52
POLR2E-206ENST00000589737 NPLOC4Q8TAT6 608 aa18.31■□□□□ 0.52
POLR2E-206ENST00000589737 RHPN1Q8TCX5 695 aa18.31■□□□□ 0.52
POLR2E-206ENST00000589737 CRNKL1Q9BZJ0 848 aaKnown RBP18.31■□□□□ 0.52
POLR2E-206ENST00000589737 IL1RAPL2Q9NP60 686 aa18.31■□□□□ 0.52
POLR2E-206ENST00000589737 DDX20Q9UHI6 824 aaKnown RBP18.31■□□□□ 0.52
POLR2E-206ENST00000589737 IVNS1ABPQ9Y6Y0 642 aa18.31■□□□□ 0.52
POLR2E-206ENST00000589737 GREB1LQ9C091 1923 aaPredicted RBP18.31■□□□□ 0.52
POLR2E-206ENST00000589737 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
POLR2E-206ENST00000589737 DLL1O00548 723 aa18.3■□□□□ 0.52
POLR2E-206ENST00000589737 MSCO60682 206 aa18.3■□□□□ 0.52
POLR2E-206ENST00000589737 Q7L0L9 218 aa18.3■□□□□ 0.52
POLR2E-206ENST00000589737 DEFB123Q8N688 67 aa18.3■□□□□ 0.52
POLR2E-206ENST00000589737 TCRBV5S4A2TA0A5A2 114 aa18.29■□□□□ 0.52
POLR2E-206ENST00000589737 CYBAP13498 195 aa18.29■□□□□ 0.52
POLR2E-206ENST00000589737 HSP90AB4PQ58FF6 505 aa18.29■□□□□ 0.52
POLR2E-206ENST00000589737 SLC9C2Q5TAH2 1124 aa18.29■□□□□ 0.52
POLR2E-206ENST00000589737 TRPV1Q8NER1 839 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms