RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 SPRYD7Q5W111 196 aa18.25■□□□□ 0.51
RPRD1A-208ENST00000589050 CYP4F22Q6NT55 531 aa18.25■□□□□ 0.51
RPRD1A-208ENST00000589050 CCDC102AQ96A19 550 aa18.25■□□□□ 0.51
RPRD1A-208ENST00000589050 NEK1Q96PY6 1258 aa18.25■□□□□ 0.51
RPRD1A-208ENST00000589050 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
RPRD1A-208ENST00000589050 ZSWIM5Q9P217 1185 aa18.25■□□□□ 0.51
RPRD1A-208ENST00000589050 NMT2O60551 498 aa18.24■□□□□ 0.51
RPRD1A-208ENST00000589050 ATP2B2Q01814 1243 aa18.24■□□□□ 0.51
RPRD1A-208ENST00000589050 CYB5R4Q7L1T6 521 aa18.24■□□□□ 0.51
RPRD1A-208ENST00000589050 MB21D2Q8IYB1 491 aaPredicted RBP18.24■□□□□ 0.51
RPRD1A-208ENST00000589050 ZNF280CQ8ND82 737 aa18.24■□□□□ 0.51
RPRD1A-208ENST00000589050 CEP95Q96GE4 821 aa18.24■□□□□ 0.51
RPRD1A-208ENST00000589050 JAKMIP1Q96N16 626 aaKnown RBP18.24■□□□□ 0.51
RPRD1A-208ENST00000589050 ZKSCAN3Q9BRR0 538 aa18.24■□□□□ 0.51
RPRD1A-208ENST00000589050 IL17RBQ9NRM6 502 aa18.24■□□□□ 0.51
RPRD1A-208ENST00000589050 AFG3L2Q9Y4W6 797 aa18.24■□□□□ 0.51
RPRD1A-208ENST00000589050 TRIM75PA6NK02 468 aa18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 FAM155AB1AL88 458 aaPredicted RBP18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 IRF6O14896 467 aa18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 ZBTB48P10074 688 aaPredicted RBP18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 EEF2P13639 858 aaKnown RBP18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 SPP2Q13103 211 aa18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 IQCA1Q86XH1 822 aa18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 CAPNS2Q96L46 248 aa18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 UBAC1Q9BSL1 405 aa18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 WDR18Q9BV38 432 aa18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 C22orf23Q9BZE7 217 aa18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 ARHGEF10LQ9HCE6 1279 aa18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 TCP11L1Q9NUJ3 509 aa18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 MTMR4Q9NYA4 1195 aa18.23■□□□□ 0.51
RPRD1A-208ENST00000589050 ATAD5Q96QE3 1844 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 TTLL1O95922 423 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 PSMA5P28066 241 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 MCM5P33992 734 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 ECE1P42892 770 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 ANAPC15P60006 121 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 PPP4R3BQ5MIZ7 849 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 CHST3Q7LGC8 479 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 SIAH1Q8IUQ4 282 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 ACER1Q8TDN7 264 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 ZSCAN10Q96SZ4 725 aaPredicted RBP18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 FEZ1Q99689 392 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 NYAP2Q9P242 653 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 CLIP2Q9UDT6 1046 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 STX8Q9UNK0 236 aa18.22■□□□□ 0.51
RPRD1A-208ENST00000589050 MYH8P13535 1937 aa18.21■□□□□ 0.51
RPRD1A-208ENST00000589050 PRC1O43663 620 aa18.21■□□□□ 0.51
RPRD1A-208ENST00000589050 HMGB1P09429 215 aaKnown RBP18.21■□□□□ 0.51
RPRD1A-208ENST00000589050 ANTXR2P58335 489 aa18.21■□□□□ 0.51
RPRD1A-208ENST00000589050 MTMR2Q13614 643 aa18.21■□□□□ 0.51
RPRD1A-208ENST00000589050 COL9A3Q14050 684 aaPredicted RBP18.21■□□□□ 0.51
RPRD1A-208ENST00000589050 CCDC178Q5BJE1 867 aa18.21■□□□□ 0.51
RPRD1A-208ENST00000589050 KCNH4Q9UQ05 1017 aa18.21■□□□□ 0.51
RPRD1A-208ENST00000589050 TNKSO95271 1327 aa18.21■□□□□ 0.51
RPRD1A-208ENST00000589050 A0A1W2PRG0 241 aa18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 USP17L10C9JJH3 530 aa18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 CXCL11O14625 94 aa18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 CASTP20810 708 aaKnown RBP18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 VEGFBP49765 207 aa18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 GTF2A2P52657 109 aa18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 SNAPC2Q13487 334 aa18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 SART3Q15020 963 aaKnown RBP18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 ZYXQ15942 572 aaKnown RBP18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 BLOC1S2Q6QNY1 142 aa18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 SH2D4AQ9H788 454 aa18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 WDR33Q9C0J8 1336 aaKnown RBP18.2■□□□□ 0.5
RPRD1A-208ENST00000589050 GREB1LQ9C091 1923 aaPredicted RBP18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 ERICH2A1L162 156 aa18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 AOC2O75106 756 aa18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 CPA1P15085 419 aa18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 NOVP48745 357 aa18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 RBM25P49756 843 aaKnown RBP18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 BACE1P56817 501 aa18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 NOGQ13253 232 aa18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 DHX32Q7L7V1 743 aaKnown RBP18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 DGKHQ86XP1 1220 aa18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 ENAHQ8N8S7 591 aaPredicted RBP18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 TTC14Q96N46 770 aa18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 TM6SF1Q9BZW5 370 aa18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 KIAA1683Q9H0B3 1180 aa18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 TMX2Q9Y320 296 aa18.19■□□□□ 0.5
RPRD1A-208ENST00000589050 A0A0G2JLL6 359 aaPredicted RBP18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 MANSC4A6NHS7 340 aaPredicted RBP18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 C19orf81C9J6K1 198 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 CETPP11597 493 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 USP14P54578 494 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 HMGCS2P54868 508 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 EXOSC10Q01780 885 aaKnown RBP18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 TMEM67Q5HYA8 995 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 RCSD1Q6JBY9 416 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 USP17L2Q6R6M4 530 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 PRRT2Q7Z6L0 340 aaPredicted RBP18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 LRRC47Q8N1G4 583 aaKnown RBP18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 MKL1Q969V6 931 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 MS4A4AQ96JQ5 239 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 TCEANC2Q96MN5 208 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 TMEM47Q9BQJ4 181 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 LRRC2Q9BYS8 371 aa18.18■□□□□ 0.5
RPRD1A-208ENST00000589050 ZSWIM6Q9HCJ5 1215 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms