RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 MICU3Q86XE3 530 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 CTCFLQ8NI51 663 aaPredicted RBP12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 SMARCC2Q8TAQ2 1214 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 NKX2-3Q8TAU0 364 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 STX8Q9UNK0 236 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 MYH8P13535 1937 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 EPS15P42566 896 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 DCAF15Q66K64 600 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 ZC3H15Q8WU90 426 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 WASF1Q92558 559 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 DEFB129Q9H1M3 183 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 MTMR4Q9NYA4 1195 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 SYNPO2Q9UMS6 1093 aa12.33□□□□□ -0.44
NEDD4L-224ENST00000588712 WDR33Q9C0J8 1336 aaKnown RBP12.32□□□□□ -0.44
NEDD4L-224ENST00000588712 MPHOSPH10O00566 681 aaKnown RBP12.32□□□□□ -0.44
NEDD4L-224ENST00000588712 TROAPQ12815 778 aa12.32□□□□□ -0.44
NEDD4L-224ENST00000588712 ABCB5Q2M3G0 1257 aa12.32□□□□□ -0.44
NEDD4L-224ENST00000588712 RCSD1Q6JBY9 416 aa12.32□□□□□ -0.44
NEDD4L-224ENST00000588712 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
NEDD4L-224ENST00000588712 PNMA1Q8ND90 353 aa12.32□□□□□ -0.44
NEDD4L-224ENST00000588712 NSUN7Q8NE18 718 aaKnown RBP12.32□□□□□ -0.44
NEDD4L-224ENST00000588712 NUP133Q8WUM0 1156 aa12.32□□□□□ -0.44
NEDD4L-224ENST00000588712 LZTS2Q9BRK4 669 aa12.32□□□□□ -0.44
NEDD4L-224ENST00000588712 TMEM39BQ9GZU3 492 aa12.32□□□□□ -0.44
NEDD4L-224ENST00000588712 IGKV6D-41A0A0C4DH26 115 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 NMT2O60551 498 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 EGFRP00533 1210 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 AKR1B1P15121 316 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 ST3GAL1Q11201 340 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 SUPT20HL1Q3ZLR7 823 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 ANGEL2Q5VTE6 544 aaKnown RBP12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 LARP1BQ659C4 914 aaKnown RBP12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 PNMA8AQ86V59 439 aaPredicted RBP12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 DCPSQ96C86 337 aaKnown RBP12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 CEP95Q96GE4 821 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 NYAP2Q9P242 653 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 IFNAR1P17181 557 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 RAB3GAP1Q15042 981 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 MKL1Q969V6 931 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 TMEM47Q9BQJ4 181 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 DNAJC18Q9H819 358 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 SENP2Q9HC62 589 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 PGAP2Q9UHJ9 254 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 ATP6V1DQ9Y5K8 247 aa12.31□□□□□ -0.44
NEDD4L-224ENST00000588712 PTPDC1A2A3K4 754 aa12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 STX6O43752 255 aa12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 AKAP17AQ02040 695 aaKnown RBP12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 SSRP1Q08945 709 aaKnown RBP12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 NCOA5Q9HCD5 579 aaKnown RBP12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 STK36Q9NRP7 1315 aa12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 SYT1P21579 422 aa12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 SMARCA1P28370 1054 aa12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 ADD1P35611 737 aaKnown RBP12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 TRPM4Q8TD43 1214 aa12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 TEPSINQ96N21 525 aa12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 GGA3Q9NZ52 723 aa12.3□□□□□ -0.44
NEDD4L-224ENST00000588712 CTDNEP1O95476 244 aa12.29□□□□□ -0.44
NEDD4L-224ENST00000588712 ASNSP08243 561 aa12.29□□□□□ -0.44
NEDD4L-224ENST00000588712 EPHX2P34913 555 aa12.29□□□□□ -0.44
NEDD4L-224ENST00000588712 HIRAP54198 1017 aaPredicted RBP12.29□□□□□ -0.44
NEDD4L-224ENST00000588712 GRM4Q14833 912 aa12.29□□□□□ -0.44
NEDD4L-224ENST00000588712 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
NEDD4L-224ENST00000588712 MYL10Q9BUA6 226 aa12.29□□□□□ -0.44
NEDD4L-224ENST00000588712 SH2D4AQ9H788 454 aa12.29□□□□□ -0.44
NEDD4L-224ENST00000588712 ORC3Q9UBD5 711 aaPredicted RBP12.29□□□□□ -0.44
NEDD4L-224ENST00000588712 CLIP2Q9UDT6 1046 aa12.29□□□□□ -0.44
NEDD4L-224ENST00000588712 SCN4AP35499 1836 aa12.29□□□□□ -0.44
NEDD4L-224ENST00000588712 H3BQV1 296 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 CTNND1O60716 968 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 BRD1O95696 1058 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 XBP1P17861 261 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 CDC27P30260 824 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 NTRK3Q16288 839 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 IFFO2Q5TF58 517 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 CCDC144CPQ8IYA2 1237 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 GBP4Q96PP9 640 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 RNF26Q9BY78 433 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 ZNF341Q9BYN7 854 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 ARHGEF10LQ9HCE6 1279 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 FAM217BQ9NTX9 383 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 SIPA1L1O43166 1804 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 FMNL1O95466 1100 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 PARP1P09874 1014 aaKnown RBP12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 RXRAP19793 462 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 CAP2P40123 477 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 ICA1Q05084 483 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 TMTC3Q6ZXV5 915 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 DDX11Q96FC9 970 aa12.28□□□□□ -0.44
NEDD4L-224ENST00000588712 FAM196BA6NMK8 535 aa12.27□□□□□ -0.45
NEDD4L-224ENST00000588712 PRPF3O43395 683 aaKnown RBP12.27□□□□□ -0.45
NEDD4L-224ENST00000588712 JAK2O60674 1132 aa12.27□□□□□ -0.45
NEDD4L-224ENST00000588712 DEXIO95424 95 aa12.27□□□□□ -0.45
NEDD4L-224ENST00000588712 GH2P01242 217 aa12.27□□□□□ -0.45
NEDD4L-224ENST00000588712 TRIM29Q14134 588 aa12.27□□□□□ -0.45
NEDD4L-224ENST00000588712 ASPRV1Q53RT3 343 aa12.27□□□□□ -0.45
NEDD4L-224ENST00000588712 GPATCH4Q5T3I0 446 aaKnown RBP12.27□□□□□ -0.45
NEDD4L-224ENST00000588712 MIGA2Q7L4E1 593 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms