RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 NR1I3Q14994 352 aa19.25■□□□□ 0.67
PRKCSH-205ENST00000587327 ATP2B1P20020 1258 aa19.24■□□□□ 0.67
PRKCSH-205ENST00000587327 PLCD1P51178 756 aa19.24■□□□□ 0.67
PRKCSH-205ENST00000587327 CLEC4GQ6UXB4 293 aa19.24■□□□□ 0.67
PRKCSH-205ENST00000587327 PTF1AQ7RTS3 328 aa19.24■□□□□ 0.67
PRKCSH-205ENST00000587327 MIGA1Q8NAN2 632 aa19.24■□□□□ 0.67
PRKCSH-205ENST00000587327 UBAC1Q9BSL1 405 aa19.24■□□□□ 0.67
PRKCSH-205ENST00000587327 CARD6Q9BX69 1037 aa19.24■□□□□ 0.67
PRKCSH-205ENST00000587327 SAMSN1Q9NSI8 373 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-205ENST00000587327 ARGLU1Q9NWB6 273 aaPredicted RBP19.24■□□□□ 0.67
PRKCSH-205ENST00000587327 TPM1P09493 284 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 CHRNDQ07001 517 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 PPARAQ07869 468 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 PPP2R5BQ15173 497 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 TOGARAM2Q6ZUX3 1019 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 C3orf67Q6ZVT6 689 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 FAM177A1Q8N128 213 aaPredicted RBP19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 RNF26Q9BY78 433 aaPredicted RBP19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 LRP2BPQ9P2M1 347 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 CNTNAP4Q9C0A0 1308 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 ZRANB2O95218 330 aaKnown RBP eCLIP19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 PNMA6AP0CW24 399 aaPredicted RBP19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 CASQ1P31415 396 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 GNG11P61952 73 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 MAP3K9P80192 1104 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 WDR24Q96S15 920 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 RAI14Q9P0K7 980 aa19.23■□□□□ 0.67
PRKCSH-205ENST00000587327 SEC23AQ15436 765 aa19.22■□□□□ 0.67
PRKCSH-205ENST00000587327 ERFEQ4G0M1 354 aa19.22■□□□□ 0.67
PRKCSH-205ENST00000587327 CT47A1Q5JQC4 288 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-205ENST00000587327 NGLY1Q96IV0 654 aa19.22■□□□□ 0.67
PRKCSH-205ENST00000587327 AATFQ9NY61 560 aaKnown RBP eCLIP19.22■□□□□ 0.67
PRKCSH-205ENST00000587327 A0A1B0GTH6 734 aa19.22■□□□□ 0.67
PRKCSH-205ENST00000587327 TMCO3Q6UWJ1 677 aa19.22■□□□□ 0.67
PRKCSH-205ENST00000587327 CCDC34Q96HJ3 373 aa19.22■□□□□ 0.67
PRKCSH-205ENST00000587327 ST7Q9NRC1 585 aa19.22■□□□□ 0.67
PRKCSH-205ENST00000587327 BTAF1O14981 1849 aa19.22■□□□□ 0.67
PRKCSH-205ENST00000587327 TRIM75PA6NK02 468 aa19.21■□□□□ 0.67
PRKCSH-205ENST00000587327 XBP1P17861 261 aa19.21■□□□□ 0.67
PRKCSH-205ENST00000587327 ESR2Q92731 530 aa19.21■□□□□ 0.67
PRKCSH-205ENST00000587327 SHISA4Q96DD7 197 aa19.21■□□□□ 0.67
PRKCSH-205ENST00000587327 ANAPC4Q9UJX5 808 aa19.21■□□□□ 0.67
PRKCSH-205ENST00000587327 THSD7AQ9UPZ6 1657 aa19.21■□□□□ 0.67
PRKCSH-205ENST00000587327 TAF1P21675 1872 aa19.21■□□□□ 0.67
PRKCSH-205ENST00000587327 TNKSO95271 1327 aa19.21■□□□□ 0.67
PRKCSH-205ENST00000587327 FAM193AP78312 1265 aa19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 AKAP17AQ02040 695 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 SMIM5Q71RC9 77 aa19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 MINDY4BA8MYZ0 360 aa19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 PKN1Q16512 942 aa19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 APTXQ7Z2E3 356 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 SDR42E1Q8WUS8 393 aa19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 DHX58Q96C10 678 aa19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 EPSTI1Q96J88 318 aa19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 PANX2Q96RD6 677 aa19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 CDC5LQ99459 802 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 PHF20Q9BVI0 1012 aa19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 MRFAP1Q9Y605 127 aa19.2■□□□□ 0.66
PRKCSH-205ENST00000587327 A0A087X0B3 334 aa19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 FAM205CA6NFA0 338 aa19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 CYP7A1P22680 504 aa19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 SPATA1Q5VX52 437 aa19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 ADGRA1Q86SQ6 560 aa19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 KIFC2Q96AC6 838 aa19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 VPS54Q9P1Q0 977 aa19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 NHSQ6T4R5 1651 aa19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 AKR1B15C9JRZ8 316 aaPredicted RBP19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 SF3B3Q15393 1217 aaKnown RBP19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 SH3RF1Q7Z6J0 888 aa19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 COL24A1Q17RW2 1714 aa19.19■□□□□ 0.66
PRKCSH-205ENST00000587327 UBAP1LF5GYI3 381 aa19.18■□□□□ 0.66
PRKCSH-205ENST00000587327 KRT2P35908 639 aa19.18■□□□□ 0.66
PRKCSH-205ENST00000587327 PLA2G4AP47712 749 aa19.18■□□□□ 0.66
PRKCSH-205ENST00000587327 FUT2Q10981 343 aa19.18■□□□□ 0.66
PRKCSH-205ENST00000587327 CUL4BQ13620 913 aa19.18■□□□□ 0.66
PRKCSH-205ENST00000587327 EARS2Q5JPH6 523 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-205ENST00000587327 FNBP4Q8N3X1 1017 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-205ENST00000587327 ENAHQ8N8S7 591 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-205ENST00000587327 PAGE5Q96GU1 130 aa19.18■□□□□ 0.66
PRKCSH-205ENST00000587327 DESI2Q9BSY9 194 aa19.18■□□□□ 0.66
PRKCSH-205ENST00000587327 TEX33O43247 280 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 PRPF3O43395 683 aaKnown RBP19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 AFMP43652 599 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 TBC1D9BQ66K14 1250 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 GPR161Q8N6U8 529 aaKnown RBP19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 FERMT2Q96AC1 680 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 ZSCAN10Q96SZ4 725 aaPredicted RBP19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 COL1A1P02452 1464 aaPredicted RBP19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 ZNF804BA4D1E1 1349 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 MAGEB6P1A0A0J9YX57 407 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 RGL2O15211 777 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 ATP8B1O43520 1251 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 CCDC175P0C221 793 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 CD44P16070 742 aaKnown RBP19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 PPP2R3AQ06190 1150 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 BICDL1Q6ZP65 573 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 CREBRFQ8IUR6 639 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 SYMPKQ92797 1274 aaKnown RBP19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 GSDMAQ96QA5 445 aa19.17■□□□□ 0.66
PRKCSH-205ENST00000587327 V9GY48 417 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms