RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 MOGSQ13724 837 aa18.98■□□□□ 0.63
CSNK1D-223ENST00000584472 TAF1CQ15572 869 aaPredicted RBP18.98■□□□□ 0.63
CSNK1D-223ENST00000584472 ABCB5Q2M3G0 1257 aa18.98■□□□□ 0.63
CSNK1D-223ENST00000584472 FASTKD5Q7L8L6 764 aaKnown RBP18.98■□□□□ 0.63
CSNK1D-223ENST00000584472 OTOP1Q7RTM1 612 aa18.98■□□□□ 0.63
CSNK1D-223ENST00000584472 ANKRD23Q86SG2 305 aa18.98■□□□□ 0.63
CSNK1D-223ENST00000584472 FAM43AQ8N2R8 423 aa18.98■□□□□ 0.63
CSNK1D-223ENST00000584472 DYNLL2Q96FJ2 89 aa18.98■□□□□ 0.63
CSNK1D-223ENST00000584472 BACH2Q9BYV9 841 aa18.98■□□□□ 0.63
CSNK1D-223ENST00000584472 U3KPZ7 1027 aaPredicted RBP18.98■□□□□ 0.63
CSNK1D-223ENST00000584472 LOC285556D6RIA3 1793 aa18.98■□□□□ 0.63
CSNK1D-223ENST00000584472 BTBD19C9JJ37 291 aa18.97■□□□□ 0.63
CSNK1D-223ENST00000584472 TLR2O60603 784 aa18.97■□□□□ 0.63
CSNK1D-223ENST00000584472 CDK8P49336 464 aa18.97■□□□□ 0.63
CSNK1D-223ENST00000584472 SPP2Q13103 211 aa18.97■□□□□ 0.63
CSNK1D-223ENST00000584472 SHROOM1Q2M3G4 852 aaPredicted RBP18.97■□□□□ 0.63
CSNK1D-223ENST00000584472 CCDC84Q86UT8 332 aaPredicted RBP18.97■□□□□ 0.63
CSNK1D-223ENST00000584472 SLC44A5Q8NCS7 719 aa18.97■□□□□ 0.63
CSNK1D-223ENST00000584472 CCDC17Q96LX7 622 aa18.97■□□□□ 0.63
CSNK1D-223ENST00000584472 CABP5Q9NP86 173 aa18.97■□□□□ 0.63
CSNK1D-223ENST00000584472 RBM8AQ9Y5S9 174 aaKnown RBP18.97■□□□□ 0.63
CSNK1D-223ENST00000584472 TNRC18O15417 2968 aaPredicted RBP18.96■□□□□ 0.63
CSNK1D-223ENST00000584472 GNRH1P01148 92 aa18.96■□□□□ 0.63
CSNK1D-223ENST00000584472 USP26Q9BXU7 913 aa18.96■□□□□ 0.63
CSNK1D-223ENST00000584472 CTNNA3Q9UI47 895 aa18.96■□□□□ 0.63
CSNK1D-223ENST00000584472 TRIM17Q9Y577 477 aa18.96■□□□□ 0.63
CSNK1D-223ENST00000584472 MINDY4BA8MYZ0 360 aa18.95■□□□□ 0.62
CSNK1D-223ENST00000584472 NECTIN1Q15223 517 aa18.95■□□□□ 0.62
CSNK1D-223ENST00000584472 SH3D19Q5HYK7 790 aa18.95■□□□□ 0.62
CSNK1D-223ENST00000584472 TMEM179Q6ZVK1 233 aa18.95■□□□□ 0.62
CSNK1D-223ENST00000584472 PROCA1Q8NCQ7 364 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-223ENST00000584472 EFCC1Q9HA90 598 aa18.95■□□□□ 0.62
CSNK1D-223ENST00000584472 ZNF287Q9HBT7 754 aa18.95■□□□□ 0.62
CSNK1D-223ENST00000584472 PTPN22Q9Y2R2 807 aa18.95■□□□□ 0.62
CSNK1D-223ENST00000584472 SLC45A1Q9Y2W3 748 aa18.95■□□□□ 0.62
CSNK1D-223ENST00000584472 CENPFP49454 3210 aa18.95■□□□□ 0.62
CSNK1D-223ENST00000584472 USP17L10C9JJH3 530 aa18.94■□□□□ 0.62
CSNK1D-223ENST00000584472 SMIM22K7EJ46 135 aa18.94■□□□□ 0.62
CSNK1D-223ENST00000584472 SLC3A2P08195 630 aaKnown RBP18.94■□□□□ 0.62
CSNK1D-223ENST00000584472 BACE1P56817 501 aa18.94■□□□□ 0.62
CSNK1D-223ENST00000584472 GPAT2Q6NUI2 795 aa18.94■□□□□ 0.62
CSNK1D-223ENST00000584472 C19orf81C9J6K1 198 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 PDHXO00330 501 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 MPHOSPH10O00566 681 aaKnown RBP18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 ZNF213O14771 459 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 GUCY1A2P33402 732 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 HMGCS2P54868 508 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 PPARAQ07869 468 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 MTMR2Q13614 643 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 RAB3GAP1Q15042 981 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 IMMTQ16891 758 aaKnown RBP18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 GADL1Q6ZQY3 521 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 CD99L2Q8TCZ2 262 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 ARMC5Q96C12 935 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 ANAPC4Q9UJX5 808 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 AGTPBP1Q9UPW5 1226 aa18.93■□□□□ 0.62
CSNK1D-223ENST00000584472 GREB1LQ9C091 1923 aaPredicted RBP18.92■□□□□ 0.62
CSNK1D-223ENST00000584472 CYP21A2P08686 494 aa18.92■□□□□ 0.62
CSNK1D-223ENST00000584472 PRMT2P55345 433 aa18.92■□□□□ 0.62
CSNK1D-223ENST00000584472 HAND2P61296 217 aa18.92■□□□□ 0.62
CSNK1D-223ENST00000584472 SEPT2Q15019 361 aa18.92■□□□□ 0.62
CSNK1D-223ENST00000584472 PARK7Q99497 189 aaKnown RBP18.92■□□□□ 0.62
CSNK1D-223ENST00000584472 MKNK2Q9HBH9 465 aa18.92■□□□□ 0.62
CSNK1D-223ENST00000584472 SLC27A2O14975 620 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 AKR1B1P15121 316 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 RASA1P20936 1047 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 HSPA4P34932 840 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 PDE4BQ07343 736 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 CREB3L3Q68CJ9 461 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 C17orf99Q6UX52 265 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 FEZ1Q99689 392 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 NBPF3Q9H094 633 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 KIAA1683Q9H0B3 1180 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 TMOD4Q9NZQ9 345 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 ADGRA2Q96PE1 1338 aa18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 RBBP6Q7Z6E9 1792 aaKnown RBP18.91■□□□□ 0.62
CSNK1D-223ENST00000584472 SOX10P56693 466 aa18.9■□□□□ 0.62
CSNK1D-223ENST00000584472 LACTBP83111 547 aaPredicted RBP18.9■□□□□ 0.62
CSNK1D-223ENST00000584472 CTDSPL2Q05D32 466 aa18.9■□□□□ 0.62
CSNK1D-223ENST00000584472 PABPC4Q13310 644 aaKnown RBP eCLIP18.9■□□□□ 0.62
CSNK1D-223ENST00000584472 KIF22Q14807 665 aa18.9■□□□□ 0.62
CSNK1D-223ENST00000584472 USP17L2Q6R6M4 530 aa18.9■□□□□ 0.62
CSNK1D-223ENST00000584472 MCCP23508 829 aa18.89■□□□□ 0.61
CSNK1D-223ENST00000584472 USP14P54578 494 aa18.89■□□□□ 0.61
CSNK1D-223ENST00000584472 TREML2Q5T2D2 321 aa18.89■□□□□ 0.61
CSNK1D-223ENST00000584472 RNF20Q5VTR2 975 aa18.89■□□□□ 0.61
CSNK1D-223ENST00000584472 TBC1D10CQ8IV04 446 aa18.89■□□□□ 0.61
CSNK1D-223ENST00000584472 KCNB2Q92953 911 aa18.89■□□□□ 0.61
CSNK1D-223ENST00000584472 C12orf42Q96LP6 360 aa18.89■□□□□ 0.61
CSNK1D-223ENST00000584472 SH2D4AQ9H788 454 aa18.89■□□□□ 0.61
CSNK1D-223ENST00000584472 KANSL2Q9H9L4 492 aa18.89■□□□□ 0.61
CSNK1D-223ENST00000584472 PNMA3Q9UL41 463 aa18.89■□□□□ 0.61
CSNK1D-223ENST00000584472 TAF6LQ9Y6J9 622 aa18.89■□□□□ 0.61
CSNK1D-223ENST00000584472 ICA1Q05084 483 aa18.88■□□□□ 0.61
CSNK1D-223ENST00000584472 STK11IPQ8N1F8 1099 aa18.88■□□□□ 0.61
CSNK1D-223ENST00000584472 ACER1Q8TDN7 264 aa18.88■□□□□ 0.61
CSNK1D-223ENST00000584472 UPF2Q9HAU5 1272 aaKnown RBP18.88■□□□□ 0.61
CSNK1D-223ENST00000584472 ARHGEF10LQ9HCE6 1279 aa18.88■□□□□ 0.61
CSNK1D-223ENST00000584472 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.88■□□□□ 0.611e-6■■■■□ 21.8
CSNK1D-223ENST00000584472 TACC3Q9Y6A5 838 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms