RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 FAM204AQ9H8W3 233 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 CTTNBP2NLQ9P2B4 639 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 AMFRQ9UKV5 643 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 A0A087WUV0 522 aaPredicted RBP11.9□□□□□ -0.5
SEC22B-201ENST00000578049 EVI5O60447 810 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 PCP11498 1178 aaKnown RBP11.9□□□□□ -0.5
SEC22B-201ENST00000578049 NCBP1Q09161 790 aaKnown RBP11.9□□□□□ -0.5
SEC22B-201ENST00000578049 ZNF790Q6PG37 636 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 NFATC2IPQ8NCF5 419 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 LPIN2Q92539 896 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 VTI1AQ96AJ9 217 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 GSDMAQ96QA5 445 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 MAST1Q9Y2H9 1570 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 GTPBP6O43824 516 aaPredicted RBP11.9□□□□□ -0.5
SEC22B-201ENST00000578049 IL2RBP14784 551 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 CTNNA1P35221 906 aaKnown RBP11.9□□□□□ -0.5
SEC22B-201ENST00000578049 GCKRQ14397 625 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 XAGE2Q96GT9 111 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 MAK16Q9BXY0 300 aaKnown RBP11.9□□□□□ -0.5
SEC22B-201ENST00000578049 ERBB4Q15303 1308 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 SH3TC1Q8TE82 1336 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 KDM3AQ9Y4C1 1321 aa11.9□□□□□ -0.5
SEC22B-201ENST00000578049 RFC4P35249 363 aa11.9□□□□□ -0.51
SEC22B-201ENST00000578049 CAPN7Q9Y6W3 813 aa11.9□□□□□ -0.51
SEC22B-201ENST00000578049 BBOF1Q8ND07 529 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 CUEDC2Q9H467 287 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 LARSQ9P2J5 1176 aaKnown RBP11.89□□□□□ -0.51
SEC22B-201ENST00000578049 HMGB1P1B2RPK0 211 aaPredicted RBP11.89□□□□□ -0.51
SEC22B-201ENST00000578049 JAK2O60674 1132 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 RXRAP19793 462 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 GJC1P36383 396 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 USP19O94966 1318 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 BAIAP2L1Q9UHR4 511 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 FAN1Q9Y2M0 1017 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 NR1I2O75469 434 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 PSMC4P43686 418 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 MIGA1Q8NAN2 632 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 GRK7Q8WTQ7 553 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 FNBP1Q96RU3 617 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 TPD52P55327 224 aaPredicted RBP11.89□□□□□ -0.51
SEC22B-201ENST00000578049 MAP7Q14244 749 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 TSC1Q92574 1164 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 KIF21AQ7Z4S6 1674 aa11.89□□□□□ -0.51
SEC22B-201ENST00000578049 KCNJ18B7U540 433 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 KCNJ12Q14500 433 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 SLFNL1Q499Z3 407 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 AKNAD1Q5T1N1 836 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 SNX29Q8TEQ0 813 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 POLR3EQ9NVU0 708 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 HERC4Q5GLZ8 1057 aaPredicted RBP11.88□□□□□ -0.51
SEC22B-201ENST00000578049 SDCCAG8Q86SQ7 713 aaPredicted RBP11.88□□□□□ -0.51
SEC22B-201ENST00000578049 TMEM87AQ8NBN3 555 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 FBXO18Q8NFZ0 1043 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 ARHGEF2Q92974 986 aaKnown RBP11.88□□□□□ -0.51
SEC22B-201ENST00000578049 PPP1R12CQ9BZL4 782 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 EFCC1Q9HA90 598 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 TBX22Q9Y458 520 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 CLGNO14967 610 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 PPP6R2O75170 966 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 TIMM10P62072 90 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 RNASELQ05823 741 aaKnown RBP11.88□□□□□ -0.51
SEC22B-201ENST00000578049 SMC1BQ8NDV3 1235 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 TYW1Q9NV66 732 aaKnown RBP11.88□□□□□ -0.51
SEC22B-201ENST00000578049 SERTAD1Q9UHV2 236 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 EPN1Q9Y6I3 576 aaPredicted RBP11.88□□□□□ -0.51
SEC22B-201ENST00000578049 ZNF521Q96K83 1311 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 PDE8AO60658 829 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 STX2P32856 288 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 TRAPPC10P48553 1259 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 LRMPQ12912 555 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 METTL14Q9HCE5 456 aaKnown RBP11.88□□□□□ -0.51
SEC22B-201ENST00000578049 BZW2Q9Y6E2 419 aaKnown RBP11.88□□□□□ -0.51
SEC22B-201ENST00000578049 MAST3O60307 1309 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 KIAA0556O60303 1618 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 MROH5Q6ZUA9 1318 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 STK10O94804 968 aaKnown RBP11.88□□□□□ -0.51
SEC22B-201ENST00000578049 MYL1P05976 194 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 KLHL7Q8IXQ5 586 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 CCDC105Q8IYK2 499 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 SIRT1Q96EB6 747 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 SPTLC3Q9NUV7 552 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 CABP7Q86V35 215 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
SEC22B-201ENST00000578049 EYA3Q99504 573 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 DNM3Q9UQ16 869 aa11.88□□□□□ -0.51
SEC22B-201ENST00000578049 EEF1GP26641 437 aaKnown RBP11.87□□□□□ -0.51
SEC22B-201ENST00000578049 STAT1P42224 750 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 NT5C2P49902 561 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 ADCY7P51828 1080 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 MAP4K1Q92918 833 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 ZMYM6O95789 1325 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 GCP02774 474 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 EPHB4P54760 987 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 OGFOD1Q8N543 542 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 TBC1D31Q96DN5 1066 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 SERPINA10Q9UK55 444 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 DMRT2Q9Y5R5 561 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 SLC39A14Q15043 492 aa11.87□□□□□ -0.51
SEC22B-201ENST00000578049 PCDHA7Q9UN72 937 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms