RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 AKR1B1P15121 316 aa31.59■■■□□ 2.65
PPP4R1-204ENST00000577393 PSMC4P43686 418 aa31.59■■■□□ 2.65
PPP4R1-204ENST00000577393 TDO2P48775 406 aa31.59■■■□□ 2.65
PPP4R1-204ENST00000577393 ZYXQ15942 572 aaKnown RBP31.59■■■□□ 2.65
PPP4R1-204ENST00000577393 TMEM179Q6ZVK1 233 aa31.59■■■□□ 2.65
PPP4R1-204ENST00000577393 MINDY4BA8MYZ0 360 aa31.58■■■□□ 2.65
PPP4R1-204ENST00000577393 HOXA7P31268 230 aaPredicted RBP31.58■■■□□ 2.65
PPP4R1-204ENST00000577393 CCDC129Q6ZRS4 1044 aa31.58■■■□□ 2.65
PPP4R1-204ENST00000577393 IFNL3Q8IZI9 196 aa31.58■■■□□ 2.65
PPP4R1-204ENST00000577393 CCDC17Q96LX7 622 aa31.58■■■□□ 2.65
PPP4R1-204ENST00000577393 KIAA1683Q9H0B3 1180 aa31.58■■■□□ 2.65
PPP4R1-204ENST00000577393 MYH8P13535 1937 aa31.57■■■□□ 2.64
PPP4R1-204ENST00000577393 USP14P54578 494 aa31.57■■■□□ 2.64
PPP4R1-204ENST00000577393 ANKRD13CQ8N6S4 541 aa31.57■■■□□ 2.64
PPP4R1-204ENST00000577393 RILPL2Q969X0 211 aa31.57■■■□□ 2.64
PPP4R1-204ENST00000577393 TRIM47Q96LD4 638 aa31.57■■■□□ 2.64
PPP4R1-204ENST00000577393 C12orf42Q96LP6 360 aa31.57■■■□□ 2.64
PPP4R1-204ENST00000577393 HTTP42858 3142 aa31.56■■■□□ 2.64
PPP4R1-204ENST00000577393 GNRH1P01148 92 aa31.56■■■□□ 2.64
PPP4R1-204ENST00000577393 IRX3P78415 501 aaPredicted RBP31.56■■■□□ 2.64
PPP4R1-204ENST00000577393 TICAM2Q86XR7 235 aa31.56■■■□□ 2.64
PPP4R1-204ENST00000577393 NACAP1Q9BZK3 213 aa31.56■■■□□ 2.64
PPP4R1-204ENST00000577393 FMNL1O95466 1100 aaPredicted RBP31.55■■■□□ 2.64
PPP4R1-204ENST00000577393 GCLCP48506 637 aaPredicted RBP31.55■■■□□ 2.64
PPP4R1-204ENST00000577393 STK11IPQ8N1F8 1099 aa31.55■■■□□ 2.64
PPP4R1-204ENST00000577393 HELLSQ9NRZ9 838 aa31.55■■■□□ 2.64
PPP4R1-204ENST00000577393 A0A1W2PRG0 241 aa31.54■■■□□ 2.64
PPP4R1-204ENST00000577393 FAM227BQ96M60 508 aa31.54■■■□□ 2.64
PPP4R1-204ENST00000577393 P2RX7Q99572 595 aaKnown RBP31.54■■■□□ 2.64
PPP4R1-204ENST00000577393 PTCH2Q9Y6C5 1203 aa31.54■■■□□ 2.64
PPP4R1-204ENST00000577393 FAM110CQ1W6H9 321 aa31.53■■■□□ 2.64
PPP4R1-204ENST00000577393 NAPBQ9H115 298 aa31.53■■■□□ 2.64
PPP4R1-204ENST00000577393 ROBO3Q96MS0 1386 aa31.53■■■□□ 2.64
PPP4R1-204ENST00000577393 PDE4AP27815 886 aa31.52■■■□□ 2.64
PPP4R1-204ENST00000577393 FCGRTP55899 365 aa31.52■■■□□ 2.64
PPP4R1-204ENST00000577393 CLEC10AQ8IUN9 316 aa31.52■■■□□ 2.64
PPP4R1-204ENST00000577393 SIAH1Q8IUQ4 282 aa31.52■■■□□ 2.64
PPP4R1-204ENST00000577393 MKNK2Q9HBH9 465 aa31.52■■■□□ 2.64
PPP4R1-204ENST00000577393 A0A0D9SFI3 127 aa31.51■■■□□ 2.63
PPP4R1-204ENST00000577393 FOXP2O15409 715 aa31.51■■■□□ 2.63
PPP4R1-204ENST00000577393 HOXD10P28358 340 aa31.51■■■□□ 2.63
PPP4R1-204ENST00000577393 PRMT2P55345 433 aa31.51■■■□□ 2.63
PPP4R1-204ENST00000577393 ICA1Q05084 483 aa31.51■■■□□ 2.63
PPP4R1-204ENST00000577393 SRRDQ9UH36 339 aa31.51■■■□□ 2.63
PPP4R1-204ENST00000577393 VCAM1P19320 739 aa31.5■■■□□ 2.63
PPP4R1-204ENST00000577393 RASA1P20936 1047 aa31.5■■■□□ 2.63
PPP4R1-204ENST00000577393 HERVK_113P62684 666 aa31.5■■■□□ 2.63
PPP4R1-204ENST00000577393 NMIQ13287 307 aaPredicted RBP31.5■■■□□ 2.63
PPP4R1-204ENST00000577393 MCMDC2Q4G0Z9 681 aa31.5■■■□□ 2.63
PPP4R1-204ENST00000577393 USP17L15C9J2P7 530 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 USP17L13C9JLJ4 530 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 USP17L11C9JVI0 530 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 USP17L18D6R9N7 530 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 USP17L22D6RA61 530 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 USP17L17D6RBQ6 530 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 USP17L19D6RCP7 530 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 USP17L20D6RJB6 530 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 SDSP20132 328 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 USP17L24Q0WX57 530 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 VPS53Q5VIR6 699 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 ARHGEF10LQ9HCE6 1279 aa31.49■■■□□ 2.63
PPP4R1-204ENST00000577393 SOX10P56693 466 aa31.48■■■□□ 2.63
PPP4R1-204ENST00000577393 CATSPERGQ6ZRH7 1159 aa31.48■■■□□ 2.63
PPP4R1-204ENST00000577393 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.48■■■□□ 2.63
PPP4R1-204ENST00000577393 KANSL2Q9H9L4 492 aa31.48■■■□□ 2.63
PPP4R1-204ENST00000577393 MGAMO43451 1857 aa31.47■■■□□ 2.63
PPP4R1-204ENST00000577393 PPARAQ07869 468 aa31.47■■■□□ 2.63
PPP4R1-204ENST00000577393 ARMC5Q96C12 935 aa31.47■■■□□ 2.63
PPP4R1-204ENST00000577393 MORF4L1Q9UBU8 362 aa31.47■■■□□ 2.63
PPP4R1-204ENST00000577393 TMX2Q9Y320 296 aa31.47■■■□□ 2.63
PPP4R1-204ENST00000577393 MYPNQ86TC9 1320 aa31.47■■■□□ 2.63
PPP4R1-204ENST00000577393 PRDM1O75626 825 aa31.46■■■□□ 2.63
PPP4R1-204ENST00000577393 KIAA1755Q5JYT7 1200 aa31.46■■■□□ 2.63
PPP4R1-204ENST00000577393 RPAP3Q9H6T3 665 aaPredicted RBP31.46■■■□□ 2.63
PPP4R1-204ENST00000577393 SH2D4AQ9H788 454 aa31.46■■■□□ 2.63
PPP4R1-204ENST00000577393 ZNF287Q9HBT7 754 aa31.46■■■□□ 2.63
PPP4R1-204ENST00000577393 TNPO2O14787 897 aaKnown RBP31.45■■■□□ 2.63
PPP4R1-204ENST00000577393 PEX10O60683 326 aa31.45■■■□□ 2.63
PPP4R1-204ENST00000577393 EEF2P13639 858 aaKnown RBP31.45■■■□□ 2.63
PPP4R1-204ENST00000577393 ATP2B2Q01814 1243 aa31.45■■■□□ 2.63
PPP4R1-204ENST00000577393 PRKCZQ05513 592 aa31.45■■■□□ 2.63
PPP4R1-204ENST00000577393 SLC9C1Q4G0N8 1177 aa31.45■■■□□ 2.63
PPP4R1-204ENST00000577393 ZNF589Q86UQ0 364 aaPredicted RBP31.45■■■□□ 2.63
PPP4R1-204ENST00000577393 ZNF444Q8N0Y2 327 aaPredicted RBP31.45■■■□□ 2.63
PPP4R1-204ENST00000577393 TXNRD2Q9NNW7 524 aa31.45■■■□□ 2.63
PPP4R1-204ENST00000577393 RBPJLQ9UBG7 517 aa31.45■■■□□ 2.63
PPP4R1-204ENST00000577393 CENPFP49454 3210 aa31.45■■■□□ 2.62
PPP4R1-204ENST00000577393 SLC3A2P08195 630 aaKnown RBP31.44■■■□□ 2.62
PPP4R1-204ENST00000577393 RGS19P49795 217 aa31.44■■■□□ 2.62
PPP4R1-204ENST00000577393 POTEEQ6S8J3 1075 aa31.44■■■□□ 2.62
PPP4R1-204ENST00000577393 GTF3C2Q8WUA4 911 aaPredicted RBP31.44■■■□□ 2.62
PPP4R1-204ENST00000577393 GABRQQ9UN88 632 aa31.44■■■□□ 2.62
PPP4R1-204ENST00000577393 ALX1Q15699 326 aa31.43■■■□□ 2.62
PPP4R1-204ENST00000577393 GPRC5AQ8NFJ5 357 aa31.43■■■□□ 2.62
PPP4R1-204ENST00000577393 RAET1EQ8TD07 263 aa31.43■■■□□ 2.62
PPP4R1-204ENST00000577393 VCPKMTQ9H867 229 aa31.43■■■□□ 2.62
PPP4R1-204ENST00000577393 PDE4BQ07343 736 aa31.42■■■□□ 2.62
PPP4R1-204ENST00000577393 TTC22Q5TAA0 569 aa31.42■■■□□ 2.62
PPP4R1-204ENST00000577393 NBPF11Q86T75 865 aa31.42■■■□□ 2.62
PPP4R1-204ENST00000577393 LPAR1Q92633 364 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms