RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 USP40Q9NVE5 1235 aa32.97■■■□□ 2.87
CTDNEP1-210ENST00000574322 RNF181Q9P0P0 153 aa32.97■■■□□ 2.87
CTDNEP1-210ENST00000574322 PSME4Q14997 1843 aa32.97■■■□□ 2.87
CTDNEP1-210ENST00000574322 PRPF3O43395 683 aaKnown RBP32.97■■■□□ 2.87
CTDNEP1-210ENST00000574322 LETM1O95202 739 aaPredicted RBP32.97■■■□□ 2.87
CTDNEP1-210ENST00000574322 U2AF2P26368 475 aaKnown RBP eCLIP32.97■■■□□ 2.87
CTDNEP1-210ENST00000574322 SCNN1DP51172 638 aa32.97■■■□□ 2.87
CTDNEP1-210ENST00000574322 CDC42EP5Q6NZY7 148 aa32.97■■■□□ 2.87
CTDNEP1-210ENST00000574322 ADAMTSL1Q8N6G6 1762 aa32.96■■■□□ 2.87
CTDNEP1-210ENST00000574322 KIF28PB7ZC32 967 aa32.96■■■□□ 2.87
CTDNEP1-210ENST00000574322 TSPY3P0CV98 308 aa32.96■■■□□ 2.87
CTDNEP1-210ENST00000574322 TSPY8P0CW00 308 aa32.96■■■□□ 2.87
CTDNEP1-210ENST00000574322 XRCC6P12956 609 aaKnown RBP eCLIP32.96■■■□□ 2.87
CTDNEP1-210ENST00000574322 MYSM1Q5VVJ2 828 aa32.96■■■□□ 2.87
CTDNEP1-210ENST00000574322 C9orf131Q5VYM1 1079 aa32.96■■■□□ 2.87
CTDNEP1-210ENST00000574322 TMTC3Q6ZXV5 915 aa32.96■■■□□ 2.87
CTDNEP1-210ENST00000574322 SLC44A5Q8NCS7 719 aa32.96■■■□□ 2.87
CTDNEP1-210ENST00000574322 PGBD1Q96JS3 809 aa32.96■■■□□ 2.87
CTDNEP1-210ENST00000574322 GABPAQ06546 454 aa32.95■■■□□ 2.87
CTDNEP1-210ENST00000574322 NEDD1Q8NHV4 660 aa32.95■■■□□ 2.87
CTDNEP1-210ENST00000574322 POLR3EQ9NVU0 708 aa32.95■■■□□ 2.87
CTDNEP1-210ENST00000574322 GUCY1A2P33402 732 aa32.94■■■□□ 2.86
CTDNEP1-210ENST00000574322 CTCFLQ8NI51 663 aaPredicted RBP32.94■■■□□ 2.86
CTDNEP1-210ENST00000574322 MYH6P13533 1939 aa32.94■■■□□ 2.86
CTDNEP1-210ENST00000574322 COL4A5P29400 1685 aa32.94■■■□□ 2.86
CTDNEP1-210ENST00000574322 SYCE3A1L190 88 aa32.94■■■□□ 2.86
CTDNEP1-210ENST00000574322 KAT14Q9H8E8 782 aa32.94■■■□□ 2.86
CTDNEP1-210ENST00000574322 DDX4Q9NQI0 724 aaKnown RBP32.94■■■□□ 2.86
CTDNEP1-210ENST00000574322 SERPINA10Q9UK55 444 aa32.94■■■□□ 2.86
CTDNEP1-210ENST00000574322 GOLGA6L4A6NEF3 574 aa32.93■■■□□ 2.86
CTDNEP1-210ENST00000574322 UBE2Q2LH0YL09 131 aa32.93■■■□□ 2.86
CTDNEP1-210ENST00000574322 NOVP48745 357 aa32.93■■■□□ 2.86
CTDNEP1-210ENST00000574322 NPM3O75607 178 aaKnown RBP32.92■■■□□ 2.86
CTDNEP1-210ENST00000574322 YEATS4O95619 227 aa32.92■■■□□ 2.86
CTDNEP1-210ENST00000574322 NASPP49321 788 aaPredicted RBP32.92■■■□□ 2.86
CTDNEP1-210ENST00000574322 ZNRF3Q9ULT6 936 aa32.92■■■□□ 2.86
CTDNEP1-210ENST00000574322 PLIN4Q96Q06 1357 aa32.92■■■□□ 2.86
CTDNEP1-210ENST00000574322 MYO3BQ8WXR4 1341 aa32.92■■■□□ 2.86
CTDNEP1-210ENST00000574322 MMP1P03956 469 aa32.91■■■□□ 2.86
CTDNEP1-210ENST00000574322 KIF5BP33176 963 aa32.91■■■□□ 2.86
CTDNEP1-210ENST00000574322 KIAA0825Q8IV33 1275 aa32.91■■■□□ 2.86
CTDNEP1-210ENST00000574322 CMTR1Q8N1G2 835 aaKnown RBP32.91■■■□□ 2.86
CTDNEP1-210ENST00000574322 OSBPL5Q9H0X9 879 aaPredicted RBP32.91■■■□□ 2.86
CTDNEP1-210ENST00000574322 YDJCA8MPS7 323 aa32.91■■■□□ 2.86
CTDNEP1-210ENST00000574322 PKN1Q16512 942 aa32.91■■■□□ 2.86
CTDNEP1-210ENST00000574322 TAOK2Q9UL54 1235 aa32.91■■■□□ 2.86
CTDNEP1-210ENST00000574322 PLEKHA8P1O95397 391 aa32.9■■■□□ 2.86
CTDNEP1-210ENST00000574322 AKAP17AQ02040 695 aaKnown RBP32.9■■■□□ 2.86
CTDNEP1-210ENST00000574322 PNMA1Q8ND90 353 aa32.9■■■□□ 2.86
CTDNEP1-210ENST00000574322 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.9■■■□□ 2.86
CTDNEP1-210ENST00000574322 FTOQ9C0B1 505 aaKnown RBP eCLIP32.9■■■□□ 2.86
CTDNEP1-210ENST00000574322 SBF1O95248 1867 aa32.9■■■□□ 2.86
CTDNEP1-210ENST00000574322 PICALMQ13492 652 aa32.89■■■□□ 2.86
CTDNEP1-210ENST00000574322 CCDC82Q8N4S0 544 aa32.89■■■□□ 2.86
CTDNEP1-210ENST00000574322 LINC00301Q8NCQ3 95 aa32.89■■■□□ 2.86
CTDNEP1-210ENST00000574322 IDI2Q9BXS1 227 aa32.89■■■□□ 2.86
CTDNEP1-210ENST00000574322 SWAP70Q9UH65 585 aa32.89■■■□□ 2.86
CTDNEP1-210ENST00000574322 CNTNAP5Q8WYK1 1306 aa32.89■■■□□ 2.86
CTDNEP1-210ENST00000574322 FOXP1Q9H334 677 aaPredicted RBP32.88■■■□□ 2.85
CTDNEP1-210ENST00000574322 LIG1P18858 919 aa32.88■■■□□ 2.85
CTDNEP1-210ENST00000574322 CEBPZQ03701 1054 aaKnown RBP32.88■■■□□ 2.85
CTDNEP1-210ENST00000574322 GRM4Q14833 912 aa32.88■■■□□ 2.85
CTDNEP1-210ENST00000574322 SAFBQ15424 915 aaKnown RBP eCLIP32.88■■■□□ 2.85
CTDNEP1-210ENST00000574322 SRBD1Q8N5C6 995 aaKnown RBP32.88■■■□□ 2.85
CTDNEP1-210ENST00000574322 KCNG4Q8TDN1 519 aa32.87■■■□□ 2.85
CTDNEP1-210ENST00000574322 EHD4Q9H223 541 aa32.87■■■□□ 2.85
CTDNEP1-210ENST00000574322 FZD9O00144 591 aa32.86■■■□□ 2.85
CTDNEP1-210ENST00000574322 XBP1P17861 261 aa32.86■■■□□ 2.85
CTDNEP1-210ENST00000574322 TMEM47Q9BQJ4 181 aa32.86■■■□□ 2.85
CTDNEP1-210ENST00000574322 DDX19AQ9NUU7 478 aaKnown RBP32.86■■■□□ 2.85
CTDNEP1-210ENST00000574322 SERPINB13Q9UIV8 391 aa32.86■■■□□ 2.85
CTDNEP1-210ENST00000574322 V9GY48 417 aaPredicted RBP32.86■■■□□ 2.85
CTDNEP1-210ENST00000574322 GNAQP50148 359 aa32.85■■■□□ 2.85
CTDNEP1-210ENST00000574322 ANO1Q5XXA6 986 aa32.85■■■□□ 2.85
CTDNEP1-210ENST00000574322 CLIC4Q9Y696 253 aa32.85■■■□□ 2.85
CTDNEP1-210ENST00000574322 EIF6P56537 245 aaKnown RBP32.85■■■□□ 2.85
CTDNEP1-210ENST00000574322 NOSTRINQ8IVI9 506 aa32.85■■■□□ 2.85
CTDNEP1-210ENST00000574322 RAD17O75943 681 aa32.84■■■□□ 2.85
CTDNEP1-210ENST00000574322 GNL2Q13823 731 aaKnown RBP32.84■■■□□ 2.85
CTDNEP1-210ENST00000574322 DHX36Q9H2U1 1008 aaKnown RBP32.84■■■□□ 2.85
CTDNEP1-210ENST00000574322 NFIAQ12857 509 aa32.83■■■□□ 2.85
CTDNEP1-210ENST00000574322 DIS3L2Q8IYB7 885 aaKnown RBP32.83■■■□□ 2.85
CTDNEP1-210ENST00000574322 BICD2Q8TD16 824 aa32.83■■■□□ 2.85
CTDNEP1-210ENST00000574322 A0A1W2PQ27 194 aa32.82■■■□□ 2.85
CTDNEP1-210ENST00000574322 A0A1W2PQ64 194 aa32.82■■■□□ 2.85
CTDNEP1-210ENST00000574322 A0A1W2PQD8 194 aa32.82■■■□□ 2.85
CTDNEP1-210ENST00000574322 HLA-DOAP06340 250 aa32.82■■■□□ 2.85
CTDNEP1-210ENST00000574322 ADALQ6DHV7 355 aa32.82■■■□□ 2.85
CTDNEP1-210ENST00000574322 PHF20Q9BVI0 1012 aa32.82■■■□□ 2.85
CTDNEP1-210ENST00000574322 KCNJ14Q9UNX9 436 aa32.82■■■□□ 2.85
CTDNEP1-210ENST00000574322 MYH8P13535 1937 aa32.82■■■□□ 2.84
CTDNEP1-210ENST00000574322 DICER1Q9UPY3 1922 aaKnown RBP32.82■■■□□ 2.84
CTDNEP1-210ENST00000574322 IGKV6D-41A0A0C4DH26 115 aa32.82■■■□□ 2.84
CTDNEP1-210ENST00000574322 VIL1P09327 827 aaKnown RBP32.82■■■□□ 2.84
CTDNEP1-210ENST00000574322 CXCL9Q07325 125 aa32.82■■■□□ 2.84
CTDNEP1-210ENST00000574322 SLC39A14Q15043 492 aa32.82■■■□□ 2.84
CTDNEP1-210ENST00000574322 STK38Q15208 465 aa32.82■■■□□ 2.84
CTDNEP1-210ENST00000574322 TSPY26PQ9H489 355 aa32.82■■■□□ 2.84
CTDNEP1-210ENST00000574322 MAD2L2Q9UI95 211 aa32.82■■■□□ 2.84
CTDNEP1-210ENST00000574322 PCDHA7Q9UN72 937 aa32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms