RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 ECM2O94769 699 aaPredicted RBP15.22■□□□□ 0.03
CDT1-203ENST00000569140 FGAP02671 866 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 RASA1P20936 1047 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 GUCY1A2P33402 732 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 BACE1P56817 501 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 MOGSQ13724 837 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 ALX1Q15699 326 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 BMP2KLQ5H9B9 411 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 TREML2Q5T2D2 321 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 USP17L2Q6R6M4 530 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 CASC1Q6TDU7 716 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 PROCA1Q8NCQ7 364 aaPredicted RBP15.22■□□□□ 0.03
CDT1-203ENST00000569140 ACER1Q8TDN7 264 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 PRDM10Q9NQV6 1147 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 PCNTO95613 3336 aa15.22■□□□□ 0.03
CDT1-203ENST00000569140 LOC285556D6RIA3 1793 aa15.21■□□□□ 0.03
CDT1-203ENST00000569140 GPR25O00155 361 aa15.21■□□□□ 0.03
CDT1-203ENST00000569140 TSPY3P0CV98 308 aa15.21■□□□□ 0.03
CDT1-203ENST00000569140 TSPY8P0CW00 308 aa15.21■□□□□ 0.03
CDT1-203ENST00000569140 CYP2C8P10632 490 aa15.21■□□□□ 0.03
CDT1-203ENST00000569140 USP14P54578 494 aa15.21■□□□□ 0.03
CDT1-203ENST00000569140 PABPC4Q13310 644 aaKnown RBP eCLIP15.21■□□□□ 0.031e-8■■□□□ 13.2
CDT1-203ENST00000569140 FAM47AQ5JRC9 791 aa15.21■□□□□ 0.03
CDT1-203ENST00000569140 GPAT2Q6NUI2 795 aa15.21■□□□□ 0.03
CDT1-203ENST00000569140 SMCR8Q8TEV9 937 aaPredicted RBP15.21■□□□□ 0.03
CDT1-203ENST00000569140 ZNF296Q8WUU4 475 aaPredicted RBP15.21■□□□□ 0.03
CDT1-203ENST00000569140 IL25Q9H293 177 aa15.21■□□□□ 0.03
CDT1-203ENST00000569140 ZCCHC17Q9NP64 241 aaKnown RBP15.21■□□□□ 0.03
CDT1-203ENST00000569140 PNMA3Q9UL41 463 aa15.21■□□□□ 0.03
CDT1-203ENST00000569140 TSPY2A6NKD2 308 aa15.2■□□□□ 0.02
CDT1-203ENST00000569140 ZNF213O14771 459 aa15.2■□□□□ 0.02
CDT1-203ENST00000569140 RANBP6O60518 1105 aaKnown RBP15.2■□□□□ 0.02
CDT1-203ENST00000569140 FKTNO75072 461 aa15.2■□□□□ 0.02
CDT1-203ENST00000569140 OSBPP22059 807 aa15.2■□□□□ 0.02
CDT1-203ENST00000569140 IRX3P78415 501 aaPredicted RBP15.2■□□□□ 0.02
CDT1-203ENST00000569140 COL13A1Q5TAT6 717 aaPredicted RBP15.2■□□□□ 0.02
CDT1-203ENST00000569140 DSCC1Q9BVC3 393 aa15.2■□□□□ 0.02
CDT1-203ENST00000569140 SH2D4AQ9H788 454 aa15.2■□□□□ 0.02
CDT1-203ENST00000569140 INCENPQ9NQS7 918 aa15.2■□□□□ 0.02
CDT1-203ENST00000569140 CPA4Q9UI42 421 aa15.2■□□□□ 0.02
CDT1-203ENST00000569140 CTNNA3Q9UI47 895 aa15.2■□□□□ 0.02
CDT1-203ENST00000569140 ZMYM6O95789 1325 aa15.19■□□□□ 0.02
CDT1-203ENST00000569140 EEF2P13639 858 aaKnown RBP15.19■□□□□ 0.02
CDT1-203ENST00000569140 TFAP4Q01664 338 aa15.19■□□□□ 0.02
CDT1-203ENST00000569140 IMMTQ16891 758 aaKnown RBP15.19■□□□□ 0.02
CDT1-203ENST00000569140 SH3D19Q5HYK7 790 aa15.19■□□□□ 0.02
CDT1-203ENST00000569140 KIAA1211Q6ZU35 1233 aa15.19■□□□□ 0.02
CDT1-203ENST00000569140 CFHR5Q9BXR6 569 aa15.19■□□□□ 0.02
CDT1-203ENST00000569140 KIAA1683Q9H0B3 1180 aa15.19■□□□□ 0.02
CDT1-203ENST00000569140 KANSL2Q9H9L4 492 aa15.19■□□□□ 0.02
CDT1-203ENST00000569140 EMILIN3Q9NT22 766 aa15.19■□□□□ 0.02
CDT1-203ENST00000569140 SGSM2O43147 1006 aa15.18■□□□□ 0.02
CDT1-203ENST00000569140 TLR2O60603 784 aa15.18■□□□□ 0.02
CDT1-203ENST00000569140 CDC45O75419 566 aa15.18■□□□□ 0.02
CDT1-203ENST00000569140 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
CDT1-203ENST00000569140 MFSD6Q6ZSS7 791 aa15.18■□□□□ 0.02
CDT1-203ENST00000569140 TBC1D10CQ8IV04 446 aa15.18■□□□□ 0.02
CDT1-203ENST00000569140 SPICE1Q8N0Z3 855 aa15.18■□□□□ 0.02
CDT1-203ENST00000569140 TANGO6Q9C0B7 1094 aa15.18■□□□□ 0.02
CDT1-203ENST00000569140 ANAPC4Q9UJX5 808 aa15.18■□□□□ 0.02
CDT1-203ENST00000569140 ISY1Q9ULR0 285 aaKnown RBP15.18■□□□□ 0.02
CDT1-203ENST00000569140 SLC45A1Q9Y2W3 748 aa15.18■□□□□ 0.02
CDT1-203ENST00000569140 CASP8AP2Q9UKL3 1982 aa15.18■□□□□ 0.02
CDT1-203ENST00000569140 LAMA4Q16363 1823 aa15.17■□□□□ 0.02
CDT1-203ENST00000569140 A0A1W2PRG0 241 aa15.17■□□□□ 0.02
CDT1-203ENST00000569140 SP3Q02447 781 aa15.17■□□□□ 0.02
CDT1-203ENST00000569140 PTH1RQ03431 593 aa15.17■□□□□ 0.02
CDT1-203ENST00000569140 KIF22Q14807 665 aa15.17■□□□□ 0.02
CDT1-203ENST00000569140 CD99L2Q8TCZ2 262 aa15.17■□□□□ 0.02
CDT1-203ENST00000569140 ERO1AQ96HE7 468 aa15.17■□□□□ 0.02
CDT1-203ENST00000569140 ASCC2Q9H1I8 757 aaPredicted RBP15.17■□□□□ 0.02
CDT1-203ENST00000569140 RNF41Q9H4P4 317 aaPredicted RBP15.17■□□□□ 0.02
CDT1-203ENST00000569140 GOPCQ9HD26 462 aa15.17■□□□□ 0.02
CDT1-203ENST00000569140 ANO2Q9NQ90 1003 aa15.17■□□□□ 0.02
CDT1-203ENST00000569140 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
CDT1-203ENST00000569140 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
CDT1-203ENST00000569140 VCAM1P19320 739 aa15.16■□□□□ 0.02
CDT1-203ENST00000569140 AKNAD1Q5T1N1 836 aa15.16■□□□□ 0.02
CDT1-203ENST00000569140 TNS4Q8IZW8 715 aa15.16■□□□□ 0.02
CDT1-203ENST00000569140 ANKRD13CQ8N6S4 541 aa15.16■□□□□ 0.02
CDT1-203ENST00000569140 STAG1Q8WVM7 1258 aa15.16■□□□□ 0.02
CDT1-203ENST00000569140 CEP95Q96GE4 821 aa15.16■□□□□ 0.02
CDT1-203ENST00000569140 ESYT1Q9BSJ8 1104 aa15.16■□□□□ 0.02
CDT1-203ENST00000569140 RPAP3Q9H6T3 665 aaPredicted RBP15.16■□□□□ 0.02
CDT1-203ENST00000569140 U3KPZ7 1027 aaPredicted RBP15.16■□□□□ 0.02
CDT1-203ENST00000569140 NEDD4P46934 1319 aa15.16■□□□□ 0.02
CDT1-203ENST00000569140 USP17L15C9J2P7 530 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 USP17L13C9JLJ4 530 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 USP17L11C9JVI0 530 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 USP17L18D6R9N7 530 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 USP17L22D6RA61 530 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 USP17L17D6RBQ6 530 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 USP17L19D6RCP7 530 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 USP17L20D6RJB6 530 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 ORC4O43929 436 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 USP17L24Q0WX57 530 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 LRRC47Q8N1G4 583 aaKnown RBP15.15■□□□□ 0.02
CDT1-203ENST00000569140 NEDD1Q8NHV4 660 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 CHMP4CQ96CF2 233 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms