RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 SESTD1Q86VW0 696 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 PPFIBP1Q86W92 1011 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 CEP57Q86XR8 500 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 DZIP1Q86YF9 867 aaKnown RBP5.55□□□□□ -1.52
TCF4-215ENST00000562638 CCAR2Q8N163 923 aaKnown RBP5.55□□□□□ -1.52
TCF4-215ENST00000562638 LRRN4CLQ8ND94 238 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 PPP1R14CQ8TAE6 165 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 DEPTORQ8TB45 409 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 TMC2Q8TDI7 906 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 WHAMMQ8TF30 809 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 SLC16A10Q8TF71 515 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 CTNNBL1Q8WYA6 563 aaPredicted RBP5.55□□□□□ -1.52
TCF4-215ENST00000562638 HPS3Q969F9 1004 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 CLUAP1Q96AJ1 413 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 TCHPQ9BT92 498 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 TAOK3Q9H2K8 898 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 TNMDQ9H2S6 317 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 SEMA4AQ9H3S1 761 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 AS3MTQ9HBK9 375 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 HELLSQ9NRZ9 838 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 GALNT8Q9NY28 637 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 IL20Q9NYY1 176 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 VPS18Q9P253 973 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 MYO1AQ9UBC5 1043 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 RAB21Q9UL25 225 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 ZNF148Q9UQR1 794 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 CARD8Q9Y2G2 431 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 PARD3Q8TEW0 1356 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 LRRC9Q6ZRR7 1453 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 GOLGA6L10A0A0M3HER8 536 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 PSDA5PKW4 1024 aaPredicted RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 HTR3EA5X5Y0 456 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 SPTLC2O15270 562 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 MEFVO15553 781 aaPredicted RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 ZSCAN12O43309 604 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 HIP1RO75146 1068 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 TBCAO75347 108 aaKnown RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 KIAA0754O94854 1291 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 PRPF6O94906 941 aaKnown RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 HSPA8P11142 646 aaKnown RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 CCT6AP40227 531 aaKnown RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 CD97P48960 835 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 PSEN2P49810 448 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 EVA1CP58658 441 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 TUBA1BP68363 451 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 ATP2B2Q01814 1243 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 NUCB1Q02818 461 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 ITIH3Q06033 890 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 FAM69CQ0P6D2 419 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 LRMPQ12912 555 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 BYSLQ13895 437 aaKnown RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 LBRQ14739 615 aaKnown RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 LONRF2Q1L5Z9 754 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 MUM1Q2TAK8 710 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 RABL6Q3YEC7 729 aaPredicted RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 CCDC40Q4G0X9 1142 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 SH2D4BQ5SQS7 431 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 KANK3Q6NY19 840 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 TUBA1AQ71U36 451 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 B4GALNT4Q76KP1 1039 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 C11orf74Q86VG3 221 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 SMC1BQ8NDV3 1235 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 GDAP1Q8TB36 358 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 ZC3H15Q8WU90 426 aaKnown RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 CACTINQ8WUQ7 758 aaKnown RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 LEO1Q8WVC0 666 aaPredicted RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 MAIP1Q8WWC4 291 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 NCSTNQ92542 709 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 UBXN4Q92575 508 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 RABGGTAQ92696 567 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 NEK1Q96PY6 1258 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 SMC6Q96SB8 1091 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 MOV10L1Q9BXT6 1211 aaKnown RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 YIPF3Q9GZM5 350 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 PREBQ9HCU5 417 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 SLC40A1Q9NP59 571 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 ZNHIT6Q9NWK9 470 aaKnown RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 KIAA1468Q9P260 1216 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 KLF15Q9UIH9 416 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 PRELID1Q9Y255 219 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 C15orf41Q9Y2V0 281 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 SH3GLB1Q9Y371 365 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 DAAM1Q9Y4D1 1078 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 PCDHB2Q9Y5E7 798 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 HECW1Q76N89 1606 aa5.54□□□□□ -1.52
TCF4-215ENST00000562638 CPSF1Q10570 1443 aaKnown RBP5.54□□□□□ -1.52
TCF4-215ENST00000562638 RUSC2Q8N2Y8 1516 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 KDM5DQ9BY66 1539 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 ERCC6Q03468 1493 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 GRIN2AQ12879 1464 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 SHANK2Q9UPX8 1470 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 LAMC1P11047 1609 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 FRMD3A2A2Y4 597 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 SRRM3A6NNA2 597 aaPredicted RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 LSM1O15116 133 aaKnown RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 ACTN4O43707 911 aaKnown RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 B4GALT4O60513 344 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 FOXD2O60548 495 aaPredicted RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 LUC7L3O95232 432 aaKnown RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 HSPA1AP0DMV8 641 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms