RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 PDE4AP27815 886 aa19.28■□□□□ 0.68
COMMD4-206ENST00000562610 LACTBP83111 547 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-206ENST00000562610 SBK1Q52WX2 424 aa19.28■□□□□ 0.68
COMMD4-206ENST00000562610 FBXO46Q6PJ61 603 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-206ENST00000562610 TMEM179Q6ZVK1 233 aa19.28■□□□□ 0.68
COMMD4-206ENST00000562610 IFNL3Q8IZI9 196 aa19.28■□□□□ 0.68
COMMD4-206ENST00000562610 FAM227BQ96M60 508 aa19.28■□□□□ 0.68
COMMD4-206ENST00000562610 A0A0D9SFI3 127 aa19.27■□□□□ 0.68
COMMD4-206ENST00000562610 OSBPP22059 807 aa19.27■□□□□ 0.68
COMMD4-206ENST00000562610 GUCY1A2P33402 732 aa19.27■□□□□ 0.68
COMMD4-206ENST00000562610 IRX3P78415 501 aaPredicted RBP19.27■□□□□ 0.68
COMMD4-206ENST00000562610 CAP1Q01518 475 aa19.27■□□□□ 0.68
COMMD4-206ENST00000562610 NMIQ13287 307 aaPredicted RBP19.27■□□□□ 0.68
COMMD4-206ENST00000562610 ARHGEF6Q15052 776 aa19.27■□□□□ 0.68
COMMD4-206ENST00000562610 USP17L2Q6R6M4 530 aa19.27■□□□□ 0.68
COMMD4-206ENST00000562610 CLEC10AQ8IUN9 316 aa19.27■□□□□ 0.68
COMMD4-206ENST00000562610 ARHGAP39Q9C0H5 1083 aa19.27■□□□□ 0.68
COMMD4-206ENST00000562610 HELLSQ9NRZ9 838 aa19.27■□□□□ 0.68
COMMD4-206ENST00000562610 USP14P54578 494 aa19.26■□□□□ 0.67
COMMD4-206ENST00000562610 ACER1Q8TDN7 264 aa19.26■□□□□ 0.67
COMMD4-206ENST00000562610 CCDC17Q96LX7 622 aa19.26■□□□□ 0.67
COMMD4-206ENST00000562610 ASCC2Q9H1I8 757 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-206ENST00000562610 MKNK2Q9HBH9 465 aa19.26■□□□□ 0.67
COMMD4-206ENST00000562610 EMILIN3Q9NT22 766 aa19.26■□□□□ 0.67
COMMD4-206ENST00000562610 HPS5Q9UPZ3 1129 aa19.26■□□□□ 0.67
COMMD4-206ENST00000562610 BCRP11274 1271 aa19.25■□□□□ 0.67
COMMD4-206ENST00000562610 ICA1Q05084 483 aa19.25■□□□□ 0.67
COMMD4-206ENST00000562610 MCMDC2Q4G0Z9 681 aa19.25■□□□□ 0.67
COMMD4-206ENST00000562610 TICAM2Q86XR7 235 aa19.25■□□□□ 0.67
COMMD4-206ENST00000562610 KIAA1683Q9H0B3 1180 aa19.25■□□□□ 0.67
COMMD4-206ENST00000562610 ARHGEF10LQ9HCE6 1279 aa19.25■□□□□ 0.67
COMMD4-206ENST00000562610 DIAPH3Q9NSV4 1193 aa19.25■□□□□ 0.67
COMMD4-206ENST00000562610 DOCK3Q8IZD9 2030 aa19.25■□□□□ 0.67
COMMD4-206ENST00000562610 COL11A1P12107 1806 aaPredicted RBP19.24■□□□□ 0.67
COMMD4-206ENST00000562610 SDSP20132 328 aa19.24■□□□□ 0.67
COMMD4-206ENST00000562610 VPS53Q5VIR6 699 aa19.24■□□□□ 0.67
COMMD4-206ENST00000562610 ANKRD13CQ8N6S4 541 aa19.24■□□□□ 0.67
COMMD4-206ENST00000562610 PTPN22Q9Y2R2 807 aa19.24■□□□□ 0.67
COMMD4-206ENST00000562610 CCDC171Q6TFL3 1326 aa19.24■□□□□ 0.67
COMMD4-206ENST00000562610 A0A0G2JMZ2 1700 aa19.23■□□□□ 0.67
COMMD4-206ENST00000562610 FMNL1O95466 1100 aaPredicted RBP19.23■□□□□ 0.67
COMMD4-206ENST00000562610 SLC3A2P08195 630 aaKnown RBP19.23■□□□□ 0.67
COMMD4-206ENST00000562610 VCAM1P19320 739 aa19.23■□□□□ 0.67
COMMD4-206ENST00000562610 PSMC4P43686 418 aa19.23■□□□□ 0.67
COMMD4-206ENST00000562610 ATP2B2Q01814 1243 aa19.23■□□□□ 0.67
COMMD4-206ENST00000562610 TTC22Q5TAA0 569 aa19.23■□□□□ 0.67
COMMD4-206ENST00000562610 C12orf42Q96LP6 360 aa19.23■□□□□ 0.67
COMMD4-206ENST00000562610 ZNF287Q9HBT7 754 aa19.23■□□□□ 0.67
COMMD4-206ENST00000562610 RBBP6Q7Z6E9 1792 aaKnown RBP19.23■□□□□ 0.67
COMMD4-206ENST00000562610 RLFQ13129 1914 aa19.23■□□□□ 0.67
COMMD4-206ENST00000562610 FOXP2O15409 715 aa19.22■□□□□ 0.67
COMMD4-206ENST00000562610 PRDM1O75626 825 aa19.22■□□□□ 0.67
COMMD4-206ENST00000562610 RASA1P20936 1047 aa19.22■□□□□ 0.67
COMMD4-206ENST00000562610 HOXA7P31268 230 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-206ENST00000562610 GCLCP48506 637 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-206ENST00000562610 PPARAQ07869 468 aa19.22■□□□□ 0.67
COMMD4-206ENST00000562610 ZNF589Q86UQ0 364 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-206ENST00000562610 TRIM47Q96LD4 638 aa19.22■□□□□ 0.67
COMMD4-206ENST00000562610 SH2D4AQ9H788 454 aa19.22■□□□□ 0.67
COMMD4-206ENST00000562610 A0A1W2PRG0 241 aa19.21■□□□□ 0.67
COMMD4-206ENST00000562610 HIP1O00291 1037 aa19.21■□□□□ 0.67
COMMD4-206ENST00000562610 GSPT1P15170 499 aaKnown RBP19.21■□□□□ 0.67
COMMD4-206ENST00000562610 CTGFP29279 349 aa19.21■□□□□ 0.67
COMMD4-206ENST00000562610 MFAP1P55081 439 aaKnown RBP19.21■□□□□ 0.67
COMMD4-206ENST00000562610 FCGRTP55899 365 aa19.21■□□□□ 0.67
COMMD4-206ENST00000562610 PDE4BQ07343 736 aa19.21■□□□□ 0.67
COMMD4-206ENST00000562610 FAM110CQ1W6H9 321 aa19.21■□□□□ 0.67
COMMD4-206ENST00000562610 CWC27Q6UX04 472 aaKnown RBP19.21■□□□□ 0.67
COMMD4-206ENST00000562610 USP17L15C9J2P7 530 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 USP17L13C9JLJ4 530 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 USP17L11C9JVI0 530 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 USP17L18D6R9N7 530 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 USP17L22D6RA61 530 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 USP17L17D6RBQ6 530 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 USP17L19D6RCP7 530 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 USP17L20D6RJB6 530 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 GNRH1P01148 92 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 NEFLP07196 543 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 HERVK_113P62684 666 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 USP17L24Q0WX57 530 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 ZNF444Q8N0Y2 327 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-206ENST00000562610 RPAP3Q9H6T3 665 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-206ENST00000562610 KANSL2Q9H9L4 492 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 PTCH2Q9Y6C5 1203 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 PLXNB2O15031 1838 aa19.2■□□□□ 0.66
COMMD4-206ENST00000562610 TNPO2O14787 897 aaKnown RBP19.19■□□□□ 0.66
COMMD4-206ENST00000562610 HSPD1P10809 573 aaKnown RBP19.19■□□□□ 0.66
COMMD4-206ENST00000562610 EEF2P13639 858 aaKnown RBP19.19■□□□□ 0.66
COMMD4-206ENST00000562610 CTDSPL2Q05D32 466 aa19.19■□□□□ 0.66
COMMD4-206ENST00000562610 CENPQQ7L2Z9 268 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-206ENST00000562610 P2RX7Q99572 595 aaKnown RBP19.19■□□□□ 0.66
COMMD4-206ENST00000562610 PAGR1Q9BTK6 254 aa19.19■□□□□ 0.66
COMMD4-206ENST00000562610 TANGO6Q9C0B7 1094 aa19.19■□□□□ 0.66
COMMD4-206ENST00000562610 HTTP42858 3142 aa19.19■□□□□ 0.66
COMMD4-206ENST00000562610 MYPNQ86TC9 1320 aa19.19■□□□□ 0.66
COMMD4-206ENST00000562610 RAD21O60216 631 aa19.18■□□□□ 0.66
COMMD4-206ENST00000562610 HOXD10P28358 340 aa19.18■□□□□ 0.66
COMMD4-206ENST00000562610 SPICE1Q8N0Z3 855 aa19.18■□□□□ 0.66
COMMD4-206ENST00000562610 SRRDQ9UH36 339 aa19.18■□□□□ 0.66
COMMD4-206ENST00000562610 TMX2Q9Y320 296 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms