RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 AFG3L2Q9Y4W6 797 aa26.5■■□□□ 1.83
SYNGR3-202ENST00000562045 HMGB1P09429 215 aaKnown RBP26.49■■□□□ 1.83
SYNGR3-202ENST00000562045 CLEC10AQ8IUN9 316 aa26.49■■□□□ 1.83
SYNGR3-202ENST00000562045 ASNSP08243 561 aa26.48■■□□□ 1.83
SYNGR3-202ENST00000562045 SEPT2Q15019 361 aa26.48■■□□□ 1.83
SYNGR3-202ENST00000562045 STOX1Q6ZVD7 989 aa26.48■■□□□ 1.83
SYNGR3-202ENST00000562045 TBC1D10CQ8IV04 446 aa26.48■■□□□ 1.83
SYNGR3-202ENST00000562045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.48■■□□□ 1.83
SYNGR3-202ENST00000562045 MPHOSPH10O00566 681 aaKnown RBP26.48■■□□□ 1.83
SYNGR3-202ENST00000562045 CD2BP2O95400 341 aaKnown RBP26.48■■□□□ 1.83
SYNGR3-202ENST00000562045 MCM2P49736 904 aa26.48■■□□□ 1.83
SYNGR3-202ENST00000562045 DGKZQ13574 1117 aa26.48■■□□□ 1.83
SYNGR3-202ENST00000562045 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.48■■□□□ 1.83
SYNGR3-202ENST00000562045 TRIM75PA6NK02 468 aa26.47■■□□□ 1.83
SYNGR3-202ENST00000562045 RAB3GAP1Q15042 981 aa26.47■■□□□ 1.83
SYNGR3-202ENST00000562045 PTPN18Q99952 460 aa26.47■■□□□ 1.83
SYNGR3-202ENST00000562045 MKNK2Q9HBH9 465 aa26.47■■□□□ 1.83
SYNGR3-202ENST00000562045 KCNH4Q9UQ05 1017 aa26.47■■□□□ 1.83
SYNGR3-202ENST00000562045 USP17L5A8MUK1 530 aa26.46■■□□□ 1.83
SYNGR3-202ENST00000562045 RPS6KB1P23443 525 aa26.45■■□□□ 1.83
SYNGR3-202ENST00000562045 SPP2Q13103 211 aa26.45■■□□□ 1.83
SYNGR3-202ENST00000562045 MOGSQ13724 837 aa26.45■■□□□ 1.83
SYNGR3-202ENST00000562045 BRI3BPQ8WY22 251 aa26.45■■□□□ 1.83
SYNGR3-202ENST00000562045 TTC14Q96N46 770 aa26.45■■□□□ 1.83
SYNGR3-202ENST00000562045 PDRG1Q9NUG6 133 aa26.45■■□□□ 1.83
SYNGR3-202ENST00000562045 TAOK2Q9UL54 1235 aa26.45■■□□□ 1.83
SYNGR3-202ENST00000562045 K7ELQ4 463 aaPredicted RBP26.45■■□□□ 1.82
SYNGR3-202ENST00000562045 TRDNQ13061 729 aa26.45■■□□□ 1.82
SYNGR3-202ENST00000562045 FAM47AQ5JRC9 791 aa26.45■■□□□ 1.82
SYNGR3-202ENST00000562045 IGF2BP3O00425 579 aaKnown RBP eCLIP26.44■■□□□ 1.82
SYNGR3-202ENST00000562045 FGRP09769 529 aa26.44■■□□□ 1.82
SYNGR3-202ENST00000562045 CPA1P15085 419 aa26.44■■□□□ 1.82
SYNGR3-202ENST00000562045 RALYLQ86SE5 291 aaKnown RBP26.44■■□□□ 1.82
SYNGR3-202ENST00000562045 SIAH1Q8IUQ4 282 aa26.44■■□□□ 1.82
SYNGR3-202ENST00000562045 ZNF280CQ8ND82 737 aa26.44■■□□□ 1.82
SYNGR3-202ENST00000562045 NCOA7Q8NI08 942 aa26.44■■□□□ 1.82
SYNGR3-202ENST00000562045 ACER1Q8TDN7 264 aa26.44■■□□□ 1.82
SYNGR3-202ENST00000562045 CABP5Q9NP86 173 aa26.44■■□□□ 1.82
SYNGR3-202ENST00000562045 CCL15-CCL14A0A0B4J2E2 113 aa26.43■■□□□ 1.82
SYNGR3-202ENST00000562045 MANSC4A6NHS7 340 aaPredicted RBP26.43■■□□□ 1.82
SYNGR3-202ENST00000562045 TM4SF4P48230 202 aa26.43■■□□□ 1.82
SYNGR3-202ENST00000562045 GTF2A2P52657 109 aa26.43■■□□□ 1.82
SYNGR3-202ENST00000562045 PDE4BQ07343 736 aa26.43■■□□□ 1.82
SYNGR3-202ENST00000562045 CCL15Q16663 113 aa26.43■■□□□ 1.82
SYNGR3-202ENST00000562045 CCDC17Q96LX7 622 aa26.43■■□□□ 1.82
SYNGR3-202ENST00000562045 RNF41Q9H4P4 317 aaPredicted RBP26.43■■□□□ 1.82
SYNGR3-202ENST00000562045 TESPA1A2RU30 521 aaPredicted RBP26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 SLC3A2P08195 630 aaKnown RBP26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 SNAPC2Q13487 334 aa26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 AKNAD1Q5T1N1 836 aa26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 TMEM179Q6ZVK1 233 aa26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 DHX32Q7L7V1 743 aaKnown RBP26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 STAG1Q8WVM7 1258 aa26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 WDR18Q9BV38 432 aa26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 GINM1Q9NU53 330 aa26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 NEDD4P46934 1319 aa26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 A0A1W2PRG0 241 aa26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 SLC4A3P48751 1232 aa26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 ALDH8A1Q9H2A2 487 aaPredicted RBP26.42■■□□□ 1.82
SYNGR3-202ENST00000562045 LOC285556D6RIA3 1793 aa26.41■■□□□ 1.82
SYNGR3-202ENST00000562045 A0A0G2JLL6 359 aaPredicted RBP26.41■■□□□ 1.82
SYNGR3-202ENST00000562045 CXCL11O14625 94 aa26.41■■□□□ 1.82
SYNGR3-202ENST00000562045 AK2P54819 239 aa26.41■■□□□ 1.82
SYNGR3-202ENST00000562045 MTMR2Q13614 643 aa26.41■■□□□ 1.82
SYNGR3-202ENST00000562045 MFSD6Q6ZSS7 791 aa26.41■■□□□ 1.82
SYNGR3-202ENST00000562045 PRRT2Q7Z6L0 340 aaPredicted RBP26.41■■□□□ 1.82
SYNGR3-202ENST00000562045 ZNF444Q8N0Y2 327 aaPredicted RBP26.41■■□□□ 1.82
SYNGR3-202ENST00000562045 CNNM2Q9H8M5 875 aa26.41■■□□□ 1.82
SYNGR3-202ENST00000562045 WBP1LQ9NX94 342 aa26.41■■□□□ 1.82
SYNGR3-202ENST00000562045 ORC4O43929 436 aa26.4■■□□□ 1.82
SYNGR3-202ENST00000562045 TFAP4Q01664 338 aa26.4■■□□□ 1.82
SYNGR3-202ENST00000562045 ANKRD1Q15327 319 aa26.4■■□□□ 1.82
SYNGR3-202ENST00000562045 RRP12Q5JTH9 1297 aaKnown RBP26.4■■□□□ 1.82
SYNGR3-202ENST00000562045 IFNL1Q8IU54 200 aa26.4■■□□□ 1.82
SYNGR3-202ENST00000562045 FAM43AQ8N2R8 423 aa26.4■■□□□ 1.82
SYNGR3-202ENST00000562045 PCP11498 1178 aaKnown RBP26.39■■□□□ 1.82
SYNGR3-202ENST00000562045 HMGCS2P54868 508 aa26.39■■□□□ 1.82
SYNGR3-202ENST00000562045 SREBF2Q12772 1141 aa26.39■■□□□ 1.82
SYNGR3-202ENST00000562045 COL9A3Q14050 684 aaPredicted RBP26.39■■□□□ 1.82
SYNGR3-202ENST00000562045 KRT23Q9C075 422 aa26.39■■□□□ 1.82
SYNGR3-202ENST00000562045 AS3MTQ9HBK9 375 aa26.39■■□□□ 1.82
SYNGR3-202ENST00000562045 IGKV6D-41A0A0C4DH26 115 aa26.39■■□□□ 1.81
SYNGR3-202ENST00000562045 BTBD19C9JJ37 291 aa26.39■■□□□ 1.81
SYNGR3-202ENST00000562045 NMT2O60551 498 aa26.39■■□□□ 1.81
SYNGR3-202ENST00000562045 CETPP11597 493 aa26.39■■□□□ 1.81
SYNGR3-202ENST00000562045 ZYXQ15942 572 aaKnown RBP26.39■■□□□ 1.81
SYNGR3-202ENST00000562045 MB21D2Q8IYB1 491 aaPredicted RBP26.39■■□□□ 1.81
SYNGR3-202ENST00000562045 ZNF287Q9HBT7 754 aa26.39■■□□□ 1.81
SYNGR3-202ENST00000562045 TOMM22Q9NS69 142 aa26.39■■□□□ 1.81
SYNGR3-202ENST00000562045 MYH4Q9Y623 1939 aa26.39■■□□□ 1.81
SYNGR3-202ENST00000562045 RANBP6O60518 1105 aaKnown RBP26.38■■□□□ 1.81
SYNGR3-202ENST00000562045 MCM5P33992 734 aa26.38■■□□□ 1.81
SYNGR3-202ENST00000562045 BACE1P56817 501 aa26.38■■□□□ 1.81
SYNGR3-202ENST00000562045 EXOSC10Q01780 885 aaKnown RBP26.38■■□□□ 1.81
SYNGR3-202ENST00000562045 MAP2K1Q02750 393 aaPredicted RBP26.38■■□□□ 1.81
SYNGR3-202ENST00000562045 GPAT2Q6NUI2 795 aa26.38■■□□□ 1.81
SYNGR3-202ENST00000562045 RNF186Q9NXI6 227 aa26.38■■□□□ 1.81
SYNGR3-202ENST00000562045 ICA1Q05084 483 aa26.37■■□□□ 1.81
SYNGR3-202ENST00000562045 NEDD1Q8NHV4 660 aa26.37■■□□□ 1.81
SYNGR3-202ENST00000562045 TCEANC2Q96MN5 208 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms