RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 PHRF1Q9P1Y6 1649 aaKnown RBP5.74□□□□□ -1.49
HERC1-211ENST00000560983 SART1O43290 800 aaKnown RBP5.74□□□□□ -1.49
HERC1-211ENST00000560983 EIF4EBP3O60516 100 aaPredicted RBP5.74□□□□□ -1.49
HERC1-211ENST00000560983 ICMTO60725 284 aa5.74□□□□□ -1.49
HERC1-211ENST00000560983 MAP4P27816 1152 aaKnown RBP5.74□□□□□ -1.49
HERC1-211ENST00000560983 GP2P55259 537 aaKnown RBP5.74□□□□□ -1.49
HERC1-211ENST00000560983 FSTL1Q12841 308 aa5.74□□□□□ -1.49
HERC1-211ENST00000560983 SGO2Q562F6 1265 aa5.74□□□□□ -1.49
HERC1-211ENST00000560983 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
HERC1-211ENST00000560983 NUTM2GQ5VZR2 741 aa5.74□□□□□ -1.49
HERC1-211ENST00000560983 CCNJLQ8IV13 435 aa5.74□□□□□ -1.49
HERC1-211ENST00000560983 FMNL2Q96PY5 1086 aa5.74□□□□□ -1.49
HERC1-211ENST00000560983 TCF12Q99081 682 aa5.74□□□□□ -1.49
HERC1-211ENST00000560983 CD2APQ9Y5K6 639 aa5.74□□□□□ -1.49
HERC1-211ENST00000560983 GPRASP1Q5JY77 1395 aa5.74□□□□□ -1.49
HERC1-211ENST00000560983 PRR36Q9H6K5 1346 aa5.74□□□□□ -1.49
HERC1-211ENST00000560983 RGPD3A6NKT7 1758 aaPredicted RBP5.73□□□□□ -1.49
HERC1-211ENST00000560983 RGPD4Q7Z3J3 1758 aa5.73□□□□□ -1.49
HERC1-211ENST00000560983 A0A1W2PP55 124 aa5.73□□□□□ -1.49
HERC1-211ENST00000560983 METTL12A8MUP2 240 aa5.73□□□□□ -1.49
HERC1-211ENST00000560983 GRIK1P39086 918 aa5.73□□□□□ -1.49
HERC1-211ENST00000560983 RGS19P49795 217 aa5.73□□□□□ -1.49
HERC1-211ENST00000560983 ZNF211Q13398 564 aaPredicted RBP5.73□□□□□ -1.49
HERC1-211ENST00000560983 CPSF6Q16630 551 aaKnown RBP eCLIP5.73□□□□□ -1.49
HERC1-211ENST00000560983 EXOSC6Q5RKV6 272 aaKnown RBP5.73□□□□□ -1.49
HERC1-211ENST00000560983 EZH1Q92800 747 aaPredicted RBP5.73□□□□□ -1.49
HERC1-211ENST00000560983 CYP4F12Q9HCS2 524 aa5.73□□□□□ -1.49
HERC1-211ENST00000560983 VPS8Q8N3P4 1428 aa5.73□□□□□ -1.49
HERC1-211ENST00000560983 CPDO75976 1380 aa5.72□□□□□ -1.49
HERC1-211ENST00000560983 FMN2Q9NZ56 1722 aa5.72□□□□□ -1.49
HERC1-211ENST00000560983 IGHA2P01877 340 aa5.72□□□□□ -1.49
HERC1-211ENST00000560983 F13BP05160 661 aa5.72□□□□□ -1.49
HERC1-211ENST00000560983 ARHGAP4P98171 946 aa5.72□□□□□ -1.49
HERC1-211ENST00000560983 SAFB2Q14151 953 aaKnown RBP eCLIP5.72□□□□□ -1.49
HERC1-211ENST00000560983 MSMPQ1L6U9 139 aa5.72□□□□□ -1.49
HERC1-211ENST00000560983 ZNF423Q2M1K9 1284 aa5.72□□□□□ -1.49
HERC1-211ENST00000560983 KIAA0319Q5VV43 1072 aa5.72□□□□□ -1.49
HERC1-211ENST00000560983 C2CD4AQ8NCU7 369 aaPredicted RBP5.72□□□□□ -1.49
HERC1-211ENST00000560983 NGDNQ8NEJ9 315 aaKnown RBP5.72□□□□□ -1.49
HERC1-211ENST00000560983 FAM129BQ96TA1 746 aa5.72□□□□□ -1.49
HERC1-211ENST00000560983 KCNF1Q9H3M0 494 aa5.72□□□□□ -1.49
HERC1-211ENST00000560983 A0A096LPE4 126 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 A0A1W2PPZ6 126 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 GAS2O43903 313 aaKnown RBP5.71□□□□□ -1.5
HERC1-211ENST00000560983 POLR3DP05423 398 aaPredicted RBP5.71□□□□□ -1.5
HERC1-211ENST00000560983 GRIA4P48058 902 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 AAMPQ13685 434 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 FAM50AQ14320 339 aaKnown RBP5.71□□□□□ -1.5
HERC1-211ENST00000560983 ASAP3Q8TDY4 903 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 GATA6Q92908 595 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 PRAM1Q96QH2 718 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 USP26Q9BXU7 913 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 CLEC4MQ9H2X3 399 aaPredicted RBP5.71□□□□□ -1.5
HERC1-211ENST00000560983 GSX1Q9H4S2 264 aaPredicted RBP5.71□□□□□ -1.5
HERC1-211ENST00000560983 ANO2Q9NQ90 1003 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 PIM2Q9P1W9 311 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 CRB1P82279 1406 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 ANKARQ7Z5J8 1434 aa5.71□□□□□ -1.5
HERC1-211ENST00000560983 YTHDC2Q9H6S0 1430 aaKnown RBP5.71□□□□□ -1.5
HERC1-211ENST00000560983 TRPM3Q9HCF6 1732 aaPredicted RBP5.71□□□□□ -1.5
HERC1-211ENST00000560983 COL5A2P05997 1499 aaPredicted RBP5.71□□□□□ -1.5
HERC1-211ENST00000560983 ALS2Q96Q42 1657 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 WDR64B1ANS9 1081 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 EXOC5O00471 708 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 ABL1P00519 1130 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 GCP02774 474 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 CTSBP07858 339 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 ITPKAP23677 461 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 HOXA10P31260 410 aaPredicted RBP5.7□□□□□ -1.5
HERC1-211ENST00000560983 SOX4Q06945 474 aaPredicted RBP5.7□□□□□ -1.5
HERC1-211ENST00000560983 PCDH1Q08174 1060 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 CDPF1Q6NVV7 123 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 NFXL1Q6ZNB6 911 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 COL23A1Q86Y22 540 aaPredicted RBP5.7□□□□□ -1.5
HERC1-211ENST00000560983 C12orf50Q8NA57 414 aaPredicted RBP5.7□□□□□ -1.5
HERC1-211ENST00000560983 ACSBG1Q96GR2 724 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 MFSD14AQ96MC6 490 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 TRIM56Q9BRZ2 755 aaKnown RBP5.7□□□□□ -1.5
HERC1-211ENST00000560983 C14orf93Q9H972 538 aaKnown RBP5.7□□□□□ -1.5
HERC1-211ENST00000560983 GOLGA2P5Q9HBQ8 144 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 PRDM10Q9NQV6 1147 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 TFCP2L1Q9NZI6 479 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 PAPPAQ13219 1627 aa5.7□□□□□ -1.5
HERC1-211ENST00000560983 FOXN1O15353 648 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 B3GALT4O96024 378 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 PRNPP04156 253 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 ADH5P11766 374 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 DRD2P14416 443 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 FOSL1P15407 271 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 IRAK1P51617 712 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 GSTM4Q03013 218 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 SPRED3Q2MJR0 410 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 USPL1Q5W0Q7 1092 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 B4GALNT3Q6L9W6 998 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 TOM1L2Q6ZVM7 507 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 SHISA5Q8N114 240 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 ABHD8Q96I13 439 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 HIRIP3Q9BW71 556 aaPredicted RBP5.69□□□□□ -1.5
HERC1-211ENST00000560983 LIN7BQ9HAP6 207 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 CLTCL1P53675 1640 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms