RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 ASNSP08243 561 aa16.03■□□□□ 0.16
HMBOX1-213ENST00000560269 FGD1P98174 961 aa16.03■□□□□ 0.16
HMBOX1-213ENST00000560269 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
HMBOX1-213ENST00000560269 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
HMBOX1-213ENST00000560269 CEP95Q96GE4 821 aa16.03■□□□□ 0.16
HMBOX1-213ENST00000560269 WRNIP1Q96S55 665 aa16.03■□□□□ 0.16
HMBOX1-213ENST00000560269 KANSL2Q9H9L4 492 aa16.03■□□□□ 0.16
HMBOX1-213ENST00000560269 SENP2Q9HC62 589 aa16.03■□□□□ 0.16
HMBOX1-213ENST00000560269 TRPM7Q96QT4 1865 aa16.03■□□□□ 0.16
HMBOX1-213ENST00000560269 INPP5BP32019 993 aa16.02■□□□□ 0.16
HMBOX1-213ENST00000560269 IREB2P48200 963 aaKnown RBP16.02■□□□□ 0.16
HMBOX1-213ENST00000560269 SEPT2Q15019 361 aa16.02■□□□□ 0.16
HMBOX1-213ENST00000560269 NOL9Q5SY16 702 aaKnown RBP16.02■□□□□ 0.16
HMBOX1-213ENST00000560269 SCYL3Q8IZE3 742 aa16.02■□□□□ 0.16
HMBOX1-213ENST00000560269 NYAP2Q9P242 653 aa16.02■□□□□ 0.16
HMBOX1-213ENST00000560269 FZD1Q9UP38 647 aa16.02■□□□□ 0.16
HMBOX1-213ENST00000560269 LIMCH1Q9UPQ0 1083 aa16.02■□□□□ 0.16
HMBOX1-213ENST00000560269 MYH4Q9Y623 1939 aa16.02■□□□□ 0.15
HMBOX1-213ENST00000560269 ANP32AP39687 249 aaKnown RBP16.01■□□□□ 0.15
HMBOX1-213ENST00000560269 MAP3K9P80192 1104 aa16.01■□□□□ 0.15
HMBOX1-213ENST00000560269 FMR1Q06787 632 aaKnown RBP eCLIP16.01■□□□□ 0.15
HMBOX1-213ENST00000560269 APOBRQ0VD83 1088 aa16.01■□□□□ 0.15
HMBOX1-213ENST00000560269 IFIT1BQ5T764 474 aaKnown RBP16.01■□□□□ 0.15
HMBOX1-213ENST00000560269 SIAH1Q8IUQ4 282 aa16.01■□□□□ 0.15
HMBOX1-213ENST00000560269 TPCN1Q9ULQ1 816 aa16.01■□□□□ 0.15
HMBOX1-213ENST00000560269 TTLL1O95922 423 aa16■□□□□ 0.15
HMBOX1-213ENST00000560269 FKBP1BP68106 108 aa16■□□□□ 0.15
HMBOX1-213ENST00000560269 ICA1Q05084 483 aa16■□□□□ 0.15
HMBOX1-213ENST00000560269 PRKG1Q13976 671 aa16■□□□□ 0.15
HMBOX1-213ENST00000560269 RAB3GAP1Q15042 981 aa16■□□□□ 0.15
HMBOX1-213ENST00000560269 PPP1R3FQ6ZSY5 799 aaPredicted RBP16■□□□□ 0.15
HMBOX1-213ENST00000560269 ARMC9Q7Z3E5 817 aa16■□□□□ 0.15
HMBOX1-213ENST00000560269 CLEC10AQ8IUN9 316 aa16■□□□□ 0.15
HMBOX1-213ENST00000560269 ZNF784Q8NCA9 323 aaPredicted RBP16■□□□□ 0.15
HMBOX1-213ENST00000560269 ZKSCAN4Q969J2 545 aaPredicted RBP16■□□□□ 0.15
HMBOX1-213ENST00000560269 MKL1Q969V6 931 aa16■□□□□ 0.15
HMBOX1-213ENST00000560269 ZNF274Q96GC6 653 aaPredicted RBP16■□□□□ 0.15
HMBOX1-213ENST00000560269 ZSCAN31Q96LW9 406 aaPredicted RBP16■□□□□ 0.15
HMBOX1-213ENST00000560269 BRPF3Q9ULD4 1205 aa16■□□□□ 0.15
HMBOX1-213ENST00000560269 STX8Q9UNK0 236 aa16■□□□□ 0.15
HMBOX1-213ENST00000560269 PHIPQ8WWQ0 1821 aa16■□□□□ 0.15
HMBOX1-213ENST00000560269 PASKQ96RG2 1323 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 KLF18A0A0U1RQI7 1052 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 CCDC69A6NI79 296 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 UNCXA6NJT0 531 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 TOMM70O94826 608 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 TOP1P11387 765 aaKnown RBP15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 EEF2P13639 858 aaKnown RBP15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 LDLRAD1Q5T700 205 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 APOA5Q6Q788 366 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 NFXL1Q6ZNB6 911 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 HSCBQ8IWL3 235 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 ANKRD13AQ8IZ07 590 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 SMC1BQ8NDV3 1235 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 RBM46Q8TBY0 533 aaKnown RBP15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 TMEM47Q9BQJ4 181 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 LARP6Q9BRS8 491 aaKnown RBP15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 TBC1D2Q9BYX2 928 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 KAT14Q9H8E8 782 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 CLIP2Q9UDT6 1046 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 SYNPO2Q9UMS6 1093 aa15.99■□□□□ 0.15
HMBOX1-213ENST00000560269 USP17L5A8MUK1 530 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 K7ELQ4 463 aaPredicted RBP15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 PDIA3P30101 505 aaKnown RBP15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 RCAN1P53805 252 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 VGLL4Q14135 290 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 TTLL12Q14166 644 aaPredicted RBP15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 MOB2Q70IA6 237 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 NOL8Q76FK4 1167 aaKnown RBP15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 ZNF654Q8IZM8 581 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 PNMA1Q8ND90 353 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 TMX3Q96JJ7 454 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 ZNF408Q9H9D4 720 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 GBA2Q9HCG7 927 aaPredicted RBP15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 SH2B1Q9NRF2 756 aaPredicted RBP15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 CSADQ9Y600 493 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 SLC12A7Q9Y666 1083 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 SNCAIPQ9Y6H5 919 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 NID2Q14112 1375 aa15.98■□□□□ 0.15
HMBOX1-213ENST00000560269 DDAH1O94760 285 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 CELF2O95319 508 aaKnown RBP15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 LARGE1O95461 756 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 PTPRAP18433 802 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 TROAPQ12815 778 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 BECN1Q14457 450 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 ME3Q16798 604 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 CST9Q5W186 159 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 SYNE3Q6ZMZ3 975 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 CATIPQ7Z7H3 387 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 WDR18Q9BV38 432 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 ARHGEF10LQ9HCE6 1279 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 PICK1Q9NRD5 415 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 HPS5Q9UPZ3 1129 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 TMX2Q9Y320 296 aa15.97■□□□□ 0.15
HMBOX1-213ENST00000560269 A0A1W2PRG0 241 aa15.96■□□□□ 0.15
HMBOX1-213ENST00000560269 ZBTB43O43298 467 aa15.96■□□□□ 0.15
HMBOX1-213ENST00000560269 PFKFB2O60825 505 aa15.96■□□□□ 0.15
HMBOX1-213ENST00000560269 CALM1P0DP23 149 aa15.96■□□□□ 0.15
HMBOX1-213ENST00000560269 CALM2P0DP24 149 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms