RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 RGS19P49795 217 aa20.73■□□□□ 0.91
AC105339.3-201ENST00000560043 FCGRTP55899 365 aa20.73■□□□□ 0.91
AC105339.3-201ENST00000560043 SOX10P56693 466 aa20.73■□□□□ 0.91
AC105339.3-201ENST00000560043 IRX6P78412 446 aaPredicted RBP20.73■□□□□ 0.91
AC105339.3-201ENST00000560043 TMEM179Q6ZVK1 233 aa20.73■□□□□ 0.91
AC105339.3-201ENST00000560043 ANKRD13CQ8N6S4 541 aa20.73■□□□□ 0.91
AC105339.3-201ENST00000560043 ACER1Q8TDN7 264 aa20.73■□□□□ 0.91
AC105339.3-201ENST00000560043 KIAA1683Q9H0B3 1180 aa20.73■□□□□ 0.91
AC105339.3-201ENST00000560043 PTCH2Q9Y6C5 1203 aa20.73■□□□□ 0.91
AC105339.3-201ENST00000560043 BAZ2AQ9UIF9 1905 aaKnown RBP20.72■□□□□ 0.91
AC105339.3-201ENST00000560043 PATL2C9JE40 543 aaKnown RBP20.72■□□□□ 0.91
AC105339.3-201ENST00000560043 ZYXQ15942 572 aaKnown RBP20.72■□□□□ 0.91
AC105339.3-201ENST00000560043 FAM110CQ1W6H9 321 aa20.72■□□□□ 0.91
AC105339.3-201ENST00000560043 C12orf42Q96LP6 360 aa20.72■□□□□ 0.91
AC105339.3-201ENST00000560043 SEC62Q99442 399 aaKnown RBP20.72■□□□□ 0.91
AC105339.3-201ENST00000560043 SRRDQ9UH36 339 aa20.72■□□□□ 0.91
AC105339.3-201ENST00000560043 SMIM22K7EJ46 135 aa20.71■□□□□ 0.91
AC105339.3-201ENST00000560043 TDO2P48775 406 aa20.71■□□□□ 0.91
AC105339.3-201ENST00000560043 ARMC5Q96C12 935 aa20.71■□□□□ 0.91
AC105339.3-201ENST00000560043 P2RX7Q99572 595 aaKnown RBP20.71■□□□□ 0.91
AC105339.3-201ENST00000560043 NACAP1Q9BZK3 213 aa20.71■□□□□ 0.91
AC105339.3-201ENST00000560043 MINDY4BA8MYZ0 360 aa20.7■□□□□ 0.9
AC105339.3-201ENST00000560043 AKR1B1P15121 316 aa20.7■□□□□ 0.9
AC105339.3-201ENST00000560043 SLC9C1Q4G0N8 1177 aa20.7■□□□□ 0.9
AC105339.3-201ENST00000560043 NBPF11Q86T75 865 aa20.7■□□□□ 0.9
AC105339.3-201ENST00000560043 TICAM2Q86XR7 235 aa20.7■□□□□ 0.9
AC105339.3-201ENST00000560043 EPB41L4AQ9HCS5 686 aaPredicted RBP20.7■□□□□ 0.9
AC105339.3-201ENST00000560043 USP17L15C9J2P7 530 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 USP17L13C9JLJ4 530 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 USP17L11C9JVI0 530 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 USP17L18D6R9N7 530 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 USP17L22D6RA61 530 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 USP17L17D6RBQ6 530 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 USP17L19D6RCP7 530 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 USP17L20D6RJB6 530 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 HERVK_113P62684 666 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 USP17L24Q0WX57 530 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 PLEKHM2Q8IWE5 1019 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 IFNL3Q8IZI9 196 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 MYPNQ86TC9 1320 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 ZSWIM8A7E2V4 1837 aa20.69■□□□□ 0.9
AC105339.3-201ENST00000560043 TRIM6-TRIM34B2RNG4 842 aa20.68■□□□□ 0.9
AC105339.3-201ENST00000560043 TNPO2O14787 897 aaKnown RBP20.68■□□□□ 0.9
AC105339.3-201ENST00000560043 RAET1EQ8TD07 263 aa20.68■□□□□ 0.9
AC105339.3-201ENST00000560043 GTF3C2Q8WUA4 911 aaPredicted RBP20.68■□□□□ 0.9
AC105339.3-201ENST00000560043 OSBPL3Q9H4L5 887 aa20.68■□□□□ 0.9
AC105339.3-201ENST00000560043 MKNK2Q9HBH9 465 aa20.68■□□□□ 0.9
AC105339.3-201ENST00000560043 ARHGEF10LQ9HCE6 1279 aa20.68■□□□□ 0.9
AC105339.3-201ENST00000560043 MORF4L1Q9UBU8 362 aa20.68■□□□□ 0.9
AC105339.3-201ENST00000560043 A0A1W2PRG0 241 aa20.67■□□□□ 0.9
AC105339.3-201ENST00000560043 VCAM1P19320 739 aa20.67■□□□□ 0.9
AC105339.3-201ENST00000560043 MLLT1Q03111 559 aaPredicted RBP20.67■□□□□ 0.9
AC105339.3-201ENST00000560043 ICA1Q05084 483 aa20.67■□□□□ 0.9
AC105339.3-201ENST00000560043 SH2D4AQ9H788 454 aa20.67■□□□□ 0.9
AC105339.3-201ENST00000560043 ZNF287Q9HBT7 754 aa20.67■□□□□ 0.9
AC105339.3-201ENST00000560043 HELLSQ9NRZ9 838 aa20.67■□□□□ 0.9
AC105339.3-201ENST00000560043 PRKCZQ05513 592 aa20.66■□□□□ 0.9
AC105339.3-201ENST00000560043 CATSPERGQ6ZRH7 1159 aa20.66■□□□□ 0.9
AC105339.3-201ENST00000560043 STK11IPQ8N1F8 1099 aa20.66■□□□□ 0.9
AC105339.3-201ENST00000560043 RILPL2Q969X0 211 aa20.66■□□□□ 0.9
AC105339.3-201ENST00000560043 COA7Q96BR5 231 aa20.66■□□□□ 0.9
AC105339.3-201ENST00000560043 ZNF333Q96JL9 665 aa20.66■□□□□ 0.9
AC105339.3-201ENST00000560043 NAPBQ9H115 298 aa20.66■□□□□ 0.9
AC105339.3-201ENST00000560043 KANSL2Q9H9L4 492 aa20.66■□□□□ 0.9
AC105339.3-201ENST00000560043 ROBO3Q96MS0 1386 aa20.66■□□□□ 0.9
AC105339.3-201ENST00000560043 CCDC129Q6ZRS4 1044 aa20.65■□□□□ 0.9
AC105339.3-201ENST00000560043 SIAH1Q8IUQ4 282 aa20.65■□□□□ 0.9
AC105339.3-201ENST00000560043 GPRC5AQ8NFJ5 357 aa20.65■□□□□ 0.9
AC105339.3-201ENST00000560043 RPAP3Q9H6T3 665 aaPredicted RBP20.65■□□□□ 0.9
AC105339.3-201ENST00000560043 RBPJLQ9UBG7 517 aa20.65■□□□□ 0.9
AC105339.3-201ENST00000560043 GABRQQ9UN88 632 aa20.65■□□□□ 0.9
AC105339.3-201ENST00000560043 TMX2Q9Y320 296 aa20.65■□□□□ 0.9
AC105339.3-201ENST00000560043 MYH8P13535 1937 aa20.65■□□□□ 0.9
AC105339.3-201ENST00000560043 SLC3A2P08195 630 aaKnown RBP20.64■□□□□ 0.89
AC105339.3-201ENST00000560043 RASA1P20936 1047 aa20.64■□□□□ 0.89
AC105339.3-201ENST00000560043 GRK4P32298 578 aa20.64■□□□□ 0.89
AC105339.3-201ENST00000560043 MCMDC2Q4G0Z9 681 aa20.64■□□□□ 0.89
AC105339.3-201ENST00000560043 CLEC10AQ8IUN9 316 aa20.64■□□□□ 0.89
AC105339.3-201ENST00000560043 ZNF444Q8N0Y2 327 aaPredicted RBP20.64■□□□□ 0.89
AC105339.3-201ENST00000560043 SH3TC2Q8TF17 1288 aa20.64■□□□□ 0.89
AC105339.3-201ENST00000560043 TMEM106CQ9BVX2 250 aa20.64■□□□□ 0.89
AC105339.3-201ENST00000560043 EEF2P13639 858 aaKnown RBP20.63■□□□□ 0.89
AC105339.3-201ENST00000560043 FLT3LGP49771 235 aa20.63■□□□□ 0.89
AC105339.3-201ENST00000560043 ATP2B2Q01814 1243 aa20.63■□□□□ 0.89
AC105339.3-201ENST00000560043 LPAR1Q92633 364 aa20.63■□□□□ 0.89
AC105339.3-201ENST00000560043 FAM227BQ96M60 508 aa20.63■□□□□ 0.89
AC105339.3-201ENST00000560043 PAGR1Q9BTK6 254 aa20.63■□□□□ 0.89
AC105339.3-201ENST00000560043 TXNRD2Q9NNW7 524 aa20.63■□□□□ 0.89
AC105339.3-201ENST00000560043 RABGAP1Q9Y3P9 1069 aa20.63■□□□□ 0.89
AC105339.3-201ENST00000560043 MGAMO43451 1857 aa20.62■□□□□ 0.89
AC105339.3-201ENST00000560043 ERVK-9P63128 1117 aa20.62■□□□□ 0.89
AC105339.3-201ENST00000560043 ERVK-24P63145 666 aa20.62■□□□□ 0.89
AC105339.3-201ENST00000560043 PDE4BQ07343 736 aa20.62■□□□□ 0.89
AC105339.3-201ENST00000560043 PPARAQ07869 468 aa20.62■□□□□ 0.89
AC105339.3-201ENST00000560043 IRF5Q13568 498 aa20.62■□□□□ 0.89
AC105339.3-201ENST00000560043 CCAR1Q8IX12 1150 aaKnown RBP20.62■□□□□ 0.89
AC105339.3-201ENST00000560043 SLAIN1Q8ND83 568 aa20.62■□□□□ 0.89
AC105339.3-201ENST00000560043 VCPKMTQ9H867 229 aa20.62■□□□□ 0.89
AC105339.3-201ENST00000560043 A0A0D9SFI3 127 aa20.61■□□□□ 0.89
AC105339.3-201ENST00000560043 ADCY3O60266 1144 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms