RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 RAB3GAP1Q15042 981 aa15.16■□□□□ 0.02
RABGGTA-207ENST00000558936 CTU1Q7Z7A3 348 aaKnown RBP15.16■□□□□ 0.02
RABGGTA-207ENST00000558936 PROCA1Q8NCQ7 364 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-207ENST00000558936 C12orf42Q96LP6 360 aa15.16■□□□□ 0.02
RABGGTA-207ENST00000558936 ASCC2Q9H1I8 757 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-207ENST00000558936 ZFYVE28Q9HCC9 887 aa15.16■□□□□ 0.02
RABGGTA-207ENST00000558936 HELLSQ9NRZ9 838 aa15.16■□□□□ 0.02
RABGGTA-207ENST00000558936 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.16■□□□□ 0.02
RABGGTA-207ENST00000558936 SLC45A1Q9Y2W3 748 aa15.16■□□□□ 0.02
RABGGTA-207ENST00000558936 MINDY4BA8MYZ0 360 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 TRIM6-TRIM34B2RNG4 842 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 USP17L10C9JJH3 530 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 CAPN15O75808 1086 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 CNMDO75829 334 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 FGAP02671 866 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 HSPD1P10809 573 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 HOXA7P31268 230 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 CTDSPL2Q05D32 466 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 Q3C1V9 767 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 MCMDC2Q4G0Z9 681 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 FASTKD5Q7L8L6 764 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 TRIM47Q96LD4 638 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 P2RX7Q99572 595 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 GINM1Q9NU53 330 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 ARPP21Q9UBL0 812 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 LAMA4Q16363 1823 aa15.15■□□□□ 0.02
RABGGTA-207ENST00000558936 A0A0G2JMZ2 1700 aa15.14■□□□□ 0.01
RABGGTA-207ENST00000558936 FGRP09769 529 aa15.14■□□□□ 0.01
RABGGTA-207ENST00000558936 LACTBP83111 547 aaPredicted RBP15.14■□□□□ 0.01
RABGGTA-207ENST00000558936 ALX1Q15699 326 aa15.14■□□□□ 0.01
RABGGTA-207ENST00000558936 ZYXQ15942 572 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-207ENST00000558936 KIAA1683Q9H0B3 1180 aa15.14■□□□□ 0.01
RABGGTA-207ENST00000558936 SWAP70Q9UH65 585 aa15.14■□□□□ 0.01
RABGGTA-207ENST00000558936 COL11A1P12107 1806 aaPredicted RBP15.14■□□□□ 0.01
RABGGTA-207ENST00000558936 GNAT2P19087 354 aa15.13■□□□□ 0.01
RABGGTA-207ENST00000558936 PPARAQ07869 468 aa15.13■□□□□ 0.01
RABGGTA-207ENST00000558936 COL9A3Q14050 684 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-207ENST00000558936 CWC27Q6UX04 472 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-207ENST00000558936 TBC1D2Q9BYX2 928 aa15.13■□□□□ 0.01
RABGGTA-207ENST00000558936 IL17RBQ9NRM6 502 aa15.13■□□□□ 0.01
RABGGTA-207ENST00000558936 RBPJLQ9UBG7 517 aa15.13■□□□□ 0.01
RABGGTA-207ENST00000558936 HPS5Q9UPZ3 1129 aa15.13■□□□□ 0.01
RABGGTA-207ENST00000558936 TRIM17Q9Y577 477 aa15.13■□□□□ 0.01
RABGGTA-207ENST00000558936 TAF6LQ9Y6J9 622 aa15.13■□□□□ 0.01
RABGGTA-207ENST00000558936 C19orf81C9J6K1 198 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 EEF2P13639 858 aaKnown RBP15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 VCAM1P19320 739 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 FAM47AQ5JRC9 791 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 TMEM179Q6ZVK1 233 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 RASGRP2Q7LDG7 609 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 TRIM34Q9BYJ4 488 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 AS3MTQ9HBK9 375 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 ZBTB47Q9UFB7 747 aaPredicted RBP15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 ANAPC4Q9UJX5 808 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 GABRQQ9UN88 632 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 PTPN22Q9Y2R2 807 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 TMX2Q9Y320 296 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 CCDC171Q6TFL3 1326 aa15.12■□□□□ 0.01
RABGGTA-207ENST00000558936 SMCHD1A6NHR9 2005 aa15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 MPHOSPH10O00566 681 aaKnown RBP15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 NMT2O60551 498 aa15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 APPP05067 770 aa15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 CHMLP26374 656 aa15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 TDO2P48775 406 aa15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 USP17L2Q6R6M4 530 aa15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 CATSPERGQ6ZRH7 1159 aa15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 TICAM2Q86XR7 235 aa15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 TBC1D10CQ8IV04 446 aa15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 ANKRD13CQ8N6S4 541 aa15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 ERO1AQ96HE7 468 aa15.11■□□□□ 0.01
RABGGTA-207ENST00000558936 NOVP48745 357 aa15.1■□□□□ 0.01
RABGGTA-207ENST00000558936 PTH1RQ03431 593 aa15.1■□□□□ 0.01
RABGGTA-207ENST00000558936 PKN2Q16513 984 aaKnown RBP15.1■□□□□ 0.01
RABGGTA-207ENST00000558936 CCDC17Q96LX7 622 aa15.1■□□□□ 0.01
RABGGTA-207ENST00000558936 PARK7Q99497 189 aaKnown RBP15.1■□□□□ 0.01
RABGGTA-207ENST00000558936 BTBD7Q9P203 1132 aa15.1■□□□□ 0.01
RABGGTA-207ENST00000558936 PTCH2Q9Y6C5 1203 aa15.1■□□□□ 0.01
RABGGTA-207ENST00000558936 PLIN4Q96Q06 1357 aa15.1■□□□□ 0.01
RABGGTA-207ENST00000558936 TNRC18O15417 2968 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 OSBPP22059 807 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 PSMC4P43686 418 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 HAND2P61296 217 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 HERVK_113P62684 666 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 FBXO46Q6PJ61 603 aaPredicted RBP15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 SPICE1Q8N0Z3 855 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 CEP95Q96GE4 821 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 NAPBQ9H115 298 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 EFCC1Q9HA90 598 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 CABP5Q9NP86 173 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 FBXO28Q9NVF7 368 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 MORF4L1Q9UBU8 362 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 GJD2Q9UKL4 321 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 TAOK2Q9UL54 1235 aa15.09■□□□□ 0.01
RABGGTA-207ENST00000558936 CCDC85CA6NKD9 419 aa15.08■□□□□ 0
RABGGTA-207ENST00000558936 SPDYE16A6NNV3 312 aaPredicted RBP15.08■□□□□ 0
RABGGTA-207ENST00000558936 ICA1Q05084 483 aa15.08■□□□□ 0
RABGGTA-207ENST00000558936 CENPQQ7L2Z9 268 aaPredicted RBP15.08■□□□□ 0
RABGGTA-207ENST00000558936 NEDD1Q8NHV4 660 aa15.08■□□□□ 0
RABGGTA-207ENST00000558936 NUP88Q99567 741 aaPredicted RBP15.08■□□□□ 0
RABGGTA-207ENST00000558936 PORCNQ9H237 461 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms