RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 DNAJC2Q99543 621 aaKnown RBP6.68□□□□□ -1.34
CASC4-206ENST00000558847 FBRSQ9HAH7 460 aa6.68□□□□□ -1.34
CASC4-206ENST00000558847 GINM1Q9NU53 330 aa6.68□□□□□ -1.34
CASC4-206ENST00000558847 UBP1Q9NZI7 540 aa6.68□□□□□ -1.34
CASC4-206ENST00000558847 TACC3Q9Y6A5 838 aa6.68□□□□□ -1.34
CASC4-206ENST00000558847 TNNI3KQ59H18 835 aa6.67□□□□□ -1.34
CASC4-206ENST00000558847 DPH6Q7L8W6 267 aa6.67□□□□□ -1.34
CASC4-206ENST00000558847 SPRED2Q7Z698 418 aa6.67□□□□□ -1.34
CASC4-206ENST00000558847 REXO1Q8N1G1 1221 aaKnown RBP6.67□□□□□ -1.34
CASC4-206ENST00000558847 PLD6Q8N2A8 252 aaKnown RBP6.67□□□□□ -1.34
CASC4-206ENST00000558847 POU5F2Q8N7G0 328 aa6.67□□□□□ -1.34
CASC4-206ENST00000558847 FAM181AQ8N9Y4 354 aa6.67□□□□□ -1.34
CASC4-206ENST00000558847 OR6P1Q8NGX9 317 aa6.67□□□□□ -1.34
CASC4-206ENST00000558847 NETO1Q8TDF5 533 aa6.67□□□□□ -1.34
CASC4-206ENST00000558847 MISP3Q96FF7 219 aa6.67□□□□□ -1.34
CASC4-206ENST00000558847 CRBNQ96SW2 442 aa6.67□□□□□ -1.34
CASC4-206ENST00000558847 SRRTQ9BXP5 876 aaKnown RBP6.67□□□□□ -1.34
CASC4-206ENST00000558847 WNT10AQ9GZT5 417 aa6.67□□□□□ -1.34
CASC4-206ENST00000558847 SSU72Q9NP77 194 aaKnown RBP6.67□□□□□ -1.34
CASC4-206ENST00000558847 PCOLCE2Q9UKZ9 415 aa6.67□□□□□ -1.34
CASC4-206ENST00000558847 SEZ6Q53EL9 994 aa6.66□□□□□ -1.34
CASC4-206ENST00000558847 JARID2Q92833 1246 aaPredicted RBP6.66□□□□□ -1.34
CASC4-206ENST00000558847 R3HCC1Q9Y3T6 440 aaKnown RBP6.66□□□□□ -1.34
CASC4-206ENST00000558847 PAPLNO95428 1278 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 GRK4P32298 578 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 CAP2P40123 477 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 JAG1P78504 1218 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 MLECQ14165 292 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 SLBPQ14493 270 aaKnown RBP eCLIP6.65□□□□□ -1.34
CASC4-206ENST00000558847 NFE2L2Q16236 605 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 NKG7Q16617 165 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 ARMCX6Q7L4S7 300 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 REC114Q7Z4M0 266 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.65□□□□□ -1.34
CASC4-206ENST00000558847 FBXO27Q8NI29 283 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 FERD3LQ96RJ6 166 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 LNPKQ9C0E8 428 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 RC3H2Q9HBD1 1191 aaKnown RBP6.65□□□□□ -1.34
CASC4-206ENST00000558847 PICK1Q9NRD5 415 aa6.65□□□□□ -1.34
CASC4-206ENST00000558847 POLR3KQ9Y2Y1 108 aaPredicted RBP6.65□□□□□ -1.34
CASC4-206ENST00000558847 U2SURPO15042 1029 aaKnown RBP6.64□□□□□ -1.35
CASC4-206ENST00000558847 LEFTY1O75610 366 aa6.64□□□□□ -1.35
CASC4-206ENST00000558847 MCM4P33991 863 aa6.64□□□□□ -1.35
CASC4-206ENST00000558847 CRKP46108 304 aa6.64□□□□□ -1.35
CASC4-206ENST00000558847 ZNF648Q5T619 568 aaPredicted RBP6.64□□□□□ -1.35
CASC4-206ENST00000558847 KCT2Q8NC54 265 aa6.64□□□□□ -1.35
CASC4-206ENST00000558847 ZNF507Q8TCN5 953 aa6.64□□□□□ -1.35
CASC4-206ENST00000558847 DUSP23Q9BVJ7 150 aa6.64□□□□□ -1.35
CASC4-206ENST00000558847 OSBPL2Q9H1P3 480 aa6.64□□□□□ -1.35
CASC4-206ENST00000558847 CD8BP10966 210 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 EIF6P56537 245 aaKnown RBP6.63□□□□□ -1.35
CASC4-206ENST00000558847 ETF1P62495 437 aaKnown RBP6.63□□□□□ -1.35
CASC4-206ENST00000558847 LRRFIP1Q32MZ4 808 aaKnown RBP6.63□□□□□ -1.35
CASC4-206ENST00000558847 TOP6BLQ8N6T0 577 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 PMFBP1Q8TBY8 1022 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 PI4K2BQ8TCG2 481 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 MKL1Q969V6 931 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 TRIM55Q9BYV6 548 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 PRR36Q9H6K5 1346 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 ZNF408Q9H9D4 720 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 SIRPGQ9P1W8 387 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 PRKAG3Q9UGI9 489 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 CORINQ9Y5Q5 1042 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 U3KQE9 123 aa6.63□□□□□ -1.35
CASC4-206ENST00000558847 TLR3O15455 904 aaKnown RBP6.62□□□□□ -1.35
CASC4-206ENST00000558847 LRIG2O94898 1065 aa6.62□□□□□ -1.35
CASC4-206ENST00000558847 CD96P40200 585 aa6.62□□□□□ -1.35
CASC4-206ENST00000558847 AOC3Q16853 763 aa6.62□□□□□ -1.35
CASC4-206ENST00000558847 CCDC144BQ3MJ40 725 aa6.62□□□□□ -1.35
CASC4-206ENST00000558847 HID1Q8IV36 788 aa6.62□□□□□ -1.35
CASC4-206ENST00000558847 MRPL41Q8IXM3 137 aaKnown RBP6.62□□□□□ -1.35
CASC4-206ENST00000558847 HRASLS5Q96KN8 279 aa6.62□□□□□ -1.35
CASC4-206ENST00000558847 EHMT1Q9H9B1 1298 aa6.62□□□□□ -1.35
CASC4-206ENST00000558847 TJP2Q9UDY2 1190 aa6.62□□□□□ -1.35
CASC4-206ENST00000558847 ADAM30Q9UKF2 790 aa6.62□□□□□ -1.35
CASC4-206ENST00000558847 VAV3Q9UKW4 847 aa6.62□□□□□ -1.35
CASC4-206ENST00000558847 ZNRF3Q9ULT6 936 aa6.62□□□□□ -1.35
CASC4-206ENST00000558847 TMA7Q9Y2S6 64 aaKnown RBP6.62□□□□□ -1.35
CASC4-206ENST00000558847 ATE1O95260 518 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 PGRP06401 933 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 ITIH2P19823 946 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 FUT4P22083 530 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 PRKCQQ04759 706 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 PDE4BQ07343 736 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 PKN1Q16512 942 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 IFI16Q16666 785 aaKnown RBP6.61□□□□□ -1.35
CASC4-206ENST00000558847 PRAMEF13Q5VWM6 474 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 CDC37L1Q7L3B6 337 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 FAM214BQ7L5A3 538 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 ATG4DQ86TL0 474 aaPredicted RBP6.61□□□□□ -1.35
CASC4-206ENST00000558847 FAM168AQ92567 244 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 ACSF2Q96CM8 615 aaPredicted RBP6.61□□□□□ -1.35
CASC4-206ENST00000558847 ANAPC16Q96DE5 110 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 ZSWIM4Q9H7M6 989 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 BRMS1Q9HCU9 246 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 PRDM10Q9NQV6 1147 aa6.61□□□□□ -1.35
CASC4-206ENST00000558847 CST3P01034 146 aaPredicted RBP6.6□□□□□ -1.35
CASC4-206ENST00000558847 RNASE1P07998 156 aaKnown RBP6.6□□□□□ -1.35
CASC4-206ENST00000558847 GIPRP48546 466 aa6.6□□□□□ -1.35
CASC4-206ENST00000558847 ZNF124Q15973 351 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms