RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 PROCA1Q8NCQ7 364 aaPredicted RBP18.97■□□□□ 0.63
TUBB3-214ENST00000557490 SLC44A5Q8NCS7 719 aa18.97■□□□□ 0.63
TUBB3-214ENST00000557490 TMOD4Q9NZQ9 345 aa18.97■□□□□ 0.63
TUBB3-214ENST00000557490 AGTPBP1Q9UPW5 1226 aa18.97■□□□□ 0.63
TUBB3-214ENST00000557490 SLC45A1Q9Y2W3 748 aa18.97■□□□□ 0.63
TUBB3-214ENST00000557490 C19orf81C9J6K1 198 aa18.96■□□□□ 0.63
TUBB3-214ENST00000557490 USP17L10C9JJH3 530 aa18.96■□□□□ 0.63
TUBB3-214ENST00000557490 PDE4AP27815 886 aa18.96■□□□□ 0.63
TUBB3-214ENST00000557490 CDK8P49336 464 aa18.96■□□□□ 0.63
TUBB3-214ENST00000557490 PABPC4Q13310 644 aaKnown RBP eCLIP18.96■□□□□ 0.63
TUBB3-214ENST00000557490 SH3D19Q5HYK7 790 aa18.96■□□□□ 0.63
TUBB3-214ENST00000557490 C16orf86Q6ZW13 317 aa18.96■□□□□ 0.63
TUBB3-214ENST00000557490 IFNL3Q8IZI9 196 aa18.96■□□□□ 0.63
TUBB3-214ENST00000557490 NEFLP07196 543 aa18.95■□□□□ 0.62
TUBB3-214ENST00000557490 MNX1P50219 401 aaPredicted RBP18.95■□□□□ 0.62
TUBB3-214ENST00000557490 MCMDC2Q4G0Z9 681 aa18.95■□□□□ 0.62
TUBB3-214ENST00000557490 CCDC129Q6ZRS4 1044 aa18.95■□□□□ 0.62
TUBB3-214ENST00000557490 CCDC17Q96LX7 622 aa18.95■□□□□ 0.62
TUBB3-214ENST00000557490 FEZ1Q99689 392 aa18.95■□□□□ 0.62
TUBB3-214ENST00000557490 NAPBQ9H115 298 aa18.95■□□□□ 0.62
TUBB3-214ENST00000557490 EPB41L4AQ9HCS5 686 aaPredicted RBP18.95■□□□□ 0.62
TUBB3-214ENST00000557490 PNMA3Q9UL41 463 aa18.95■□□□□ 0.62
TUBB3-214ENST00000557490 SDSP20132 328 aa18.94■□□□□ 0.62
TUBB3-214ENST00000557490 NMIQ13287 307 aaPredicted RBP18.94■□□□□ 0.62
TUBB3-214ENST00000557490 ARHGEF6Q15052 776 aa18.94■□□□□ 0.62
TUBB3-214ENST00000557490 TREML2Q5T2D2 321 aa18.94■□□□□ 0.62
TUBB3-214ENST00000557490 USP17L2Q6R6M4 530 aa18.94■□□□□ 0.62
TUBB3-214ENST00000557490 TMEM179Q6ZVK1 233 aa18.94■□□□□ 0.62
TUBB3-214ENST00000557490 FAM227BQ96M60 508 aa18.94■□□□□ 0.62
TUBB3-214ENST00000557490 ATAD5Q96QE3 1844 aa18.94■□□□□ 0.62
TUBB3-214ENST00000557490 PHIPQ8WWQ0 1821 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 A0A0D9SFI3 127 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 SMIM22K7EJ46 135 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 HIP1O00291 1037 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 CYP2C8P10632 490 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 OSBPP22059 807 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 KIF22Q14807 665 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 SEPT2Q15019 361 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 SMCR8Q8TEV9 937 aaPredicted RBP18.93■□□□□ 0.62
TUBB3-214ENST00000557490 MKNK2Q9HBH9 465 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 ZNF287Q9HBT7 754 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 DIAPH3Q9NSV4 1193 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 CPA4Q9UI42 421 aa18.93■□□□□ 0.62
TUBB3-214ENST00000557490 UNC80Q8N2C7 3258 aa18.92■□□□□ 0.62
TUBB3-214ENST00000557490 CENPBP07199 599 aaPredicted RBP18.92■□□□□ 0.62
TUBB3-214ENST00000557490 SLC3A2P08195 630 aaKnown RBP18.92■□□□□ 0.62
TUBB3-214ENST00000557490 AKR1B1P15121 316 aa18.92■□□□□ 0.62
TUBB3-214ENST00000557490 GUCY1A2P33402 732 aa18.92■□□□□ 0.62
TUBB3-214ENST00000557490 USP14P54578 494 aa18.92■□□□□ 0.62
TUBB3-214ENST00000557490 SLC9C1Q4G0N8 1177 aa18.92■□□□□ 0.62
TUBB3-214ENST00000557490 TTC22Q5TAA0 569 aa18.92■□□□□ 0.62
TUBB3-214ENST00000557490 C17orf99Q6UX52 265 aa18.92■□□□□ 0.62
TUBB3-214ENST00000557490 CENPQQ7L2Z9 268 aaPredicted RBP18.92■□□□□ 0.62
TUBB3-214ENST00000557490 STK11IPQ8N1F8 1099 aa18.92■□□□□ 0.62
TUBB3-214ENST00000557490 PRO3102Q9H379 93 aa18.92■□□□□ 0.62
TUBB3-214ENST00000557490 BAZ2AQ9UIF9 1905 aaKnown RBP18.92■□□□□ 0.62
TUBB3-214ENST00000557490 MFAP1P55081 439 aaKnown RBP18.91■□□□□ 0.62
TUBB3-214ENST00000557490 ACER1Q8TDN7 264 aa18.91■□□□□ 0.62
TUBB3-214ENST00000557490 KIAA1683Q9H0B3 1180 aa18.91■□□□□ 0.62
TUBB3-214ENST00000557490 PTCH2Q9Y6C5 1203 aa18.91■□□□□ 0.62
TUBB3-214ENST00000557490 ADGRA2Q96PE1 1338 aa18.91■□□□□ 0.62
TUBB3-214ENST00000557490 ROBO3Q96MS0 1386 aa18.91■□□□□ 0.62
TUBB3-214ENST00000557490 MYCP01106 439 aaPredicted RBP18.9■□□□□ 0.62
TUBB3-214ENST00000557490 IRX3P78415 501 aaPredicted RBP18.9■□□□□ 0.62
TUBB3-214ENST00000557490 ZYXQ15942 572 aaKnown RBP18.9■□□□□ 0.62
TUBB3-214ENST00000557490 NBPF11Q86T75 865 aa18.9■□□□□ 0.62
TUBB3-214ENST00000557490 EMILIN3Q9NT22 766 aa18.9■□□□□ 0.62
TUBB3-214ENST00000557490 CCDC171Q6TFL3 1326 aa18.9■□□□□ 0.62
TUBB3-214ENST00000557490 HOXA7P31268 230 aaPredicted RBP18.89■□□□□ 0.61
TUBB3-214ENST00000557490 LACTBP83111 547 aaPredicted RBP18.89■□□□□ 0.61
TUBB3-214ENST00000557490 ICA1Q05084 483 aa18.89■□□□□ 0.61
TUBB3-214ENST00000557490 PDE4BQ07343 736 aa18.89■□□□□ 0.61
TUBB3-214ENST00000557490 PPARAQ07869 468 aa18.89■□□□□ 0.61
TUBB3-214ENST00000557490 VPS53Q5VIR6 699 aa18.89■□□□□ 0.61
TUBB3-214ENST00000557490 CWC27Q6UX04 472 aaKnown RBP18.89■□□□□ 0.61
TUBB3-214ENST00000557490 ZNF444Q8N0Y2 327 aaPredicted RBP18.89■□□□□ 0.61
TUBB3-214ENST00000557490 C12orf42Q96LP6 360 aa18.89■□□□□ 0.61
TUBB3-214ENST00000557490 ASCC2Q9H1I8 757 aaPredicted RBP18.89■□□□□ 0.61
TUBB3-214ENST00000557490 SH2D4AQ9H788 454 aa18.89■□□□□ 0.61
TUBB3-214ENST00000557490 ARHGEF10LQ9HCE6 1279 aa18.89■□□□□ 0.61
TUBB3-214ENST00000557490 PTPRFP10586 1907 aa18.88■□□□□ 0.61
TUBB3-214ENST00000557490 FOXP2O15409 715 aa18.88■□□□□ 0.61
TUBB3-214ENST00000557490 BCRP11274 1271 aa18.88■□□□□ 0.61
TUBB3-214ENST00000557490 GSPT1P15170 499 aaKnown RBP18.88■□□□□ 0.61
TUBB3-214ENST00000557490 RASA1P20936 1047 aa18.88■□□□□ 0.61
TUBB3-214ENST00000557490 GCLCP48506 637 aaPredicted RBP18.88■□□□□ 0.61
TUBB3-214ENST00000557490 ALX1Q15699 326 aa18.88■□□□□ 0.61
TUBB3-214ENST00000557490 ZNF589Q86UQ0 364 aaPredicted RBP18.88■□□□□ 0.61
TUBB3-214ENST00000557490 KANSL2Q9H9L4 492 aa18.88■□□□□ 0.61
TUBB3-214ENST00000557490 HSPD1P10809 573 aaKnown RBP18.87■□□□□ 0.61
TUBB3-214ENST00000557490 ATP2B2Q01814 1243 aa18.87■□□□□ 0.61
TUBB3-214ENST00000557490 DPF3Q92784 378 aa18.87■□□□□ 0.61
TUBB3-214ENST00000557490 CCDC136Q96JN2 1154 aa18.87■□□□□ 0.61
TUBB3-214ENST00000557490 LOC285556D6RIA3 1793 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 A0A1W2PRG0 241 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 USP17L15C9J2P7 530 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 USP17L13C9JLJ4 530 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 USP17L11C9JVI0 530 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 USP17L18D6R9N7 530 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 USP17L22D6RA61 530 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms