RNA–Protein interactions for RNA: ENST00000557435.1

SRSF5-218, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 622 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-218ENST00000557435 SHROOM1Q2M3G4 852 aaPredicted RBP11.17□□□□□ -0.62
SRSF5-218ENST00000557435 GPAT2Q6NUI2 795 aa11.17□□□□□ -0.62
SRSF5-218ENST00000557435 TMEM179Q6ZVK1 233 aa11.17□□□□□ -0.62
SRSF5-218ENST00000557435 CCDC84Q86UT8 332 aaPredicted RBP11.17□□□□□ -0.62
SRSF5-218ENST00000557435 SIAH1Q8IUQ4 282 aa11.17□□□□□ -0.62
SRSF5-218ENST00000557435 FAM43AQ8N2R8 423 aa11.17□□□□□ -0.62
SRSF5-218ENST00000557435 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.17□□□□□ -0.62
SRSF5-218ENST00000557435 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
SRSF5-218ENST00000557435 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.17□□□□□ -0.62
SRSF5-218ENST00000557435 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.17□□□□□ -0.62
SRSF5-218ENST00000557435 SLC45A1Q9Y2W3 748 aa11.17□□□□□ -0.62
SRSF5-218ENST00000557435 GREB1LQ9C091 1923 aaPredicted RBP11.16□□□□□ -0.62
SRSF5-218ENST00000557435 TRIM75PA6NK02 468 aa11.16□□□□□ -0.62
SRSF5-218ENST00000557435 USP17L10C9JJH3 530 aa11.16□□□□□ -0.62
SRSF5-218ENST00000557435 HSPA8P11142 646 aaKnown RBP11.16□□□□□ -0.62
SRSF5-218ENST00000557435 PCP11498 1178 aaKnown RBP11.16□□□□□ -0.62
SRSF5-218ENST00000557435 AKR1B1P15121 316 aa11.16□□□□□ -0.62
SRSF5-218ENST00000557435 PDE4BQ07343 736 aa11.16□□□□□ -0.62
SRSF5-218ENST00000557435 SEPT2Q15019 361 aa11.16□□□□□ -0.62
SRSF5-218ENST00000557435 PROCA1Q8NCQ7 364 aaPredicted RBP11.16□□□□□ -0.62
SRSF5-218ENST00000557435 KIAA1683Q9H0B3 1180 aa11.16□□□□□ -0.62
SRSF5-218ENST00000557435 KANSL2Q9H9L4 492 aa11.16□□□□□ -0.62
SRSF5-218ENST00000557435 MKNK2Q9HBH9 465 aa11.16□□□□□ -0.62
SRSF5-218ENST00000557435 IGKV6D-41A0A0C4DH26 115 aa11.15□□□□□ -0.62
SRSF5-218ENST00000557435 ORC4O43929 436 aa11.15□□□□□ -0.62
SRSF5-218ENST00000557435 HOXA7P31268 230 aaPredicted RBP11.15□□□□□ -0.62
SRSF5-218ENST00000557435 NT5C2P49902 561 aa11.15□□□□□ -0.62
SRSF5-218ENST00000557435 ZNF444Q8N0Y2 327 aaPredicted RBP11.15□□□□□ -0.62
SRSF5-218ENST00000557435 NEDD1Q8NHV4 660 aa11.15□□□□□ -0.62
SRSF5-218ENST00000557435 MAP4K1Q92918 833 aa11.15□□□□□ -0.62
SRSF5-218ENST00000557435 C12orf42Q96LP6 360 aa11.15□□□□□ -0.62
SRSF5-218ENST00000557435 EMILIN3Q9NT22 766 aa11.15□□□□□ -0.62
SRSF5-218ENST00000557435 CTNNA3Q9UI47 895 aa11.15□□□□□ -0.62
SRSF5-218ENST00000557435 TMX2Q9Y320 296 aa11.15□□□□□ -0.62
SRSF5-218ENST00000557435 TACC3Q9Y6A5 838 aa11.15□□□□□ -0.62
SRSF5-218ENST00000557435 CASP8AP2Q9UKL3 1982 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 A0A1W2PRG0 241 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 PDHXO00330 501 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 MPHOSPH10O00566 681 aaKnown RBP11.14□□□□□ -0.63
SRSF5-218ENST00000557435 ZNF213O14771 459 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 TLR2O60603 784 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 TBC1D8O95759 1140 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 NOVP48745 357 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 LBX1P52954 281 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 CTDSPL2Q05D32 466 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 RAB3GAP1Q15042 981 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 USP17L2Q6R6M4 530 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 ACER1Q8TDN7 264 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 STAG1Q8WVM7 1258 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 MKL1Q969V6 931 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 ESYT1Q9BSJ8 1104 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 R3HDMLQ9H3Y0 253 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 ZFYVE28Q9HCC9 887 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 SYNPO2Q9UMS6 1093 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 AGTPBP1Q9UPW5 1226 aa11.14□□□□□ -0.63
SRSF5-218ENST00000557435 LOC285556D6RIA3 1793 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 GPR25O00155 361 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 PRDM1O75626 825 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 USP14P54578 494 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 HMGCS2P54868 508 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 PTH1RQ03431 593 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 CRHR2Q13324 411 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 MTMR2Q13614 643 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 TAF1CQ15572 869 aaPredicted RBP11.13□□□□□ -0.63
SRSF5-218ENST00000557435 AKNAD1Q5T1N1 836 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 INCENPQ9NQS7 918 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 TCP11L1Q9NUJ3 509 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 NYAP2Q9P242 653 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 PLIN4Q96Q06 1357 aa11.13□□□□□ -0.63
SRSF5-218ENST00000557435 ADGRA2Q96PE1 1338 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 CDC45O75419 566 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 EEF2P13639 858 aaKnown RBP11.12□□□□□ -0.63
SRSF5-218ENST00000557435 TFAP4Q01664 338 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 ICA1Q05084 483 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 PABPC4Q13310 644 aaKnown RBP eCLIP11.12□□□□□ -0.63
SRSF5-218ENST00000557435 IMMTQ16891 758 aaKnown RBP11.12□□□□□ -0.63
SRSF5-218ENST00000557435 TREML2Q5T2D2 321 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 C17orf99Q6UX52 265 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 GADL1Q6ZQY3 521 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 MFSD6Q6ZSS7 791 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 STK11IPQ8N1F8 1099 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 RNF41Q9H4P4 317 aaPredicted RBP11.12□□□□□ -0.63
SRSF5-218ENST00000557435 ARHGEF10LQ9HCE6 1279 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 MTMR4Q9NYA4 1195 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 TMOD4Q9NZQ9 345 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 TSKSQ9UJT2 592 aa11.12□□□□□ -0.63
SRSF5-218ENST00000557435 TSPY3P0CV98 308 aa11.11□□□□□ -0.63
SRSF5-218ENST00000557435 TSPY8P0CW00 308 aa11.11□□□□□ -0.63
SRSF5-218ENST00000557435 HAND2P61296 217 aa11.11□□□□□ -0.63
SRSF5-218ENST00000557435 PPP4R3BQ5MIZ7 849 aa11.11□□□□□ -0.63
SRSF5-218ENST00000557435 CATSPERGQ6ZRH7 1159 aa11.11□□□□□ -0.63
SRSF5-218ENST00000557435 ZNF296Q8WUU4 475 aaPredicted RBP11.11□□□□□ -0.63
SRSF5-218ENST00000557435 LPAR1Q92633 364 aa11.11□□□□□ -0.63
SRSF5-218ENST00000557435 PARK7Q99497 189 aaKnown RBP11.11□□□□□ -0.63
SRSF5-218ENST00000557435 LSG1Q9H089 658 aaKnown RBP11.11□□□□□ -0.63
SRSF5-218ENST00000557435 SH2D4AQ9H788 454 aa11.11□□□□□ -0.63
SRSF5-218ENST00000557435 IL17RBQ9NRM6 502 aa11.11□□□□□ -0.63
SRSF5-218ENST00000557435 PNMA3Q9UL41 463 aa11.11□□□□□ -0.63
SRSF5-218ENST00000557435 LAMA4Q16363 1823 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms