RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 ABCB5Q2M3G0 1257 aa27.2■■□□□ 1.94
PABPN1-207ENST00000556821 PLXNB2O15031 1838 aa27.2■■□□□ 1.94
PABPN1-207ENST00000556821 RANBP2P49792 3224 aaKnown RBP27.19■■□□□ 1.94
PABPN1-207ENST00000556821 GSG1L2A8MUP6 293 aa27.19■■□□□ 1.94
PABPN1-207ENST00000556821 GPAA1O43292 621 aa27.19■■□□□ 1.94
PABPN1-207ENST00000556821 GUCY1A2P33402 732 aa27.19■■□□□ 1.94
PABPN1-207ENST00000556821 SEC62Q99442 399 aaKnown RBP27.19■■□□□ 1.94
PABPN1-207ENST00000556821 USP17L10C9JJH3 530 aa27.18■■□□□ 1.94
PABPN1-207ENST00000556821 NUCB1Q02818 461 aa27.18■■□□□ 1.94
PABPN1-207ENST00000556821 ZMYM1Q5SVZ6 1142 aa27.18■■□□□ 1.94
PABPN1-207ENST00000556821 CTR9Q6PD62 1173 aa27.18■■□□□ 1.94
PABPN1-207ENST00000556821 CHD1LQ86WJ1 897 aa27.18■■□□□ 1.94
PABPN1-207ENST00000556821 SWAP70Q9UH65 585 aa27.18■■□□□ 1.94
PABPN1-207ENST00000556821 C19orf81C9J6K1 198 aa27.17■■□□□ 1.94
PABPN1-207ENST00000556821 GNRH1P01148 92 aa27.17■■□□□ 1.94
PABPN1-207ENST00000556821 PRMT2P55345 433 aa27.17■■□□□ 1.94
PABPN1-207ENST00000556821 RAB3GAP1Q15042 981 aa27.17■■□□□ 1.94
PABPN1-207ENST00000556821 LRRFIP1Q32MZ4 808 aaKnown RBP27.17■■□□□ 1.94
PABPN1-207ENST00000556821 DPF3Q92784 378 aa27.17■■□□□ 1.94
PABPN1-207ENST00000556821 EPB41L4AQ9HCS5 686 aaPredicted RBP27.17■■□□□ 1.94
PABPN1-207ENST00000556821 TAOK2Q9UL54 1235 aa27.17■■□□□ 1.94
PABPN1-207ENST00000556821 MTFR1Q15390 333 aa27.16■■□□□ 1.94
PABPN1-207ENST00000556821 DDRGK1Q96HY6 314 aa27.16■■□□□ 1.94
PABPN1-207ENST00000556821 EMILIN3Q9NT22 766 aa27.16■■□□□ 1.94
PABPN1-207ENST00000556821 ARPP21Q9UBL0 812 aaPredicted RBP27.16■■□□□ 1.94
PABPN1-207ENST00000556821 COL11A1P12107 1806 aaPredicted RBP27.16■■□□□ 1.94
PABPN1-207ENST00000556821 ECM2O94769 699 aaPredicted RBP27.15■■□□□ 1.94
PABPN1-207ENST00000556821 SEPT2Q15019 361 aa27.15■■□□□ 1.94
PABPN1-207ENST00000556821 C16orf86Q6ZW13 317 aa27.15■■□□□ 1.94
PABPN1-207ENST00000556821 SMCR8Q8TEV9 937 aaPredicted RBP27.15■■□□□ 1.94
PABPN1-207ENST00000556821 EVI5LQ96CN4 794 aa27.15■■□□□ 1.94
PABPN1-207ENST00000556821 TRIM47Q96LD4 638 aa27.15■■□□□ 1.94
PABPN1-207ENST00000556821 ASCC2Q9H1I8 757 aaPredicted RBP27.15■■□□□ 1.94
PABPN1-207ENST00000556821 CABP5Q9NP86 173 aa27.15■■□□□ 1.94
PABPN1-207ENST00000556821 TMOD4Q9NZQ9 345 aa27.15■■□□□ 1.94
PABPN1-207ENST00000556821 PNMA3Q9UL41 463 aa27.15■■□□□ 1.94
PABPN1-207ENST00000556821 A0A0G2JMZ2 1700 aa27.15■■□□□ 1.94
PABPN1-207ENST00000556821 ROBO3Q96MS0 1386 aa27.14■■□□□ 1.94
PABPN1-207ENST00000556821 CDK8P49336 464 aa27.14■■□□□ 1.94
PABPN1-207ENST00000556821 KIF22Q14807 665 aa27.14■■□□□ 1.94
PABPN1-207ENST00000556821 SBK1Q52WX2 424 aa27.14■■□□□ 1.94
PABPN1-207ENST00000556821 GIMAP6Q6P9H5 292 aa27.14■■□□□ 1.94
PABPN1-207ENST00000556821 PLEKHM2Q8IWE5 1019 aa27.14■■□□□ 1.94
PABPN1-207ENST00000556821 AMOTL1Q8IY63 956 aa27.14■■□□□ 1.94
PABPN1-207ENST00000556821 ACER1Q8TDN7 264 aa27.14■■□□□ 1.94
PABPN1-207ENST00000556821 AKR1B1P15121 316 aa27.13■■□□□ 1.93
PABPN1-207ENST00000556821 HOXA7P31268 230 aaPredicted RBP27.13■■□□□ 1.93
PABPN1-207ENST00000556821 PABPC4Q13310 644 aaKnown RBP eCLIP27.13■■□□□ 1.932e-6■□□□□ 10.7
PABPN1-207ENST00000556821 C12orf42Q96LP6 360 aa27.13■■□□□ 1.93
PABPN1-207ENST00000556821 LAMA4Q16363 1823 aa27.13■■□□□ 1.93
PABPN1-207ENST00000556821 GNAT2P19087 354 aa27.12■■□□□ 1.93
PABPN1-207ENST00000556821 PSMC4P43686 418 aa27.12■■□□□ 1.93
PABPN1-207ENST00000556821 GJA8P48165 433 aa27.12■■□□□ 1.93
PABPN1-207ENST00000556821 ZYXQ15942 572 aaKnown RBP27.12■■□□□ 1.93
PABPN1-207ENST00000556821 USP17L2Q6R6M4 530 aa27.12■■□□□ 1.93
PABPN1-207ENST00000556821 FEZ1Q99689 392 aa27.12■■□□□ 1.93
PABPN1-207ENST00000556821 KIAA1683Q9H0B3 1180 aa27.12■■□□□ 1.93
PABPN1-207ENST00000556821 MPHOSPH10O00566 681 aaKnown RBP27.11■■□□□ 1.93
PABPN1-207ENST00000556821 TMEM179Q6ZVK1 233 aa27.11■■□□□ 1.93
PABPN1-207ENST00000556821 CLEC10AQ8IUN9 316 aa27.11■■□□□ 1.93
PABPN1-207ENST00000556821 ANKRD13CQ8N6S4 541 aa27.11■■□□□ 1.93
PABPN1-207ENST00000556821 NKX2-3Q8TAU0 364 aa27.11■■□□□ 1.93
PABPN1-207ENST00000556821 OSBPL3Q9H4L5 887 aa27.11■■□□□ 1.93
PABPN1-207ENST00000556821 A0A1W2PPC1 479 aa27.1■■□□□ 1.93
PABPN1-207ENST00000556821 A0A1W2PRG0 241 aa27.1■■□□□ 1.93
PABPN1-207ENST00000556821 FOXP2O15409 715 aa27.1■■□□□ 1.93
PABPN1-207ENST00000556821 GJB1P08034 283 aa27.1■■□□□ 1.93
PABPN1-207ENST00000556821 OSBPP22059 807 aa27.1■■□□□ 1.93
PABPN1-207ENST00000556821 CCDC129Q6ZRS4 1044 aa27.1■■□□□ 1.93
PABPN1-207ENST00000556821 SOX1O00570 391 aaPredicted RBP27.09■■□□□ 1.93
PABPN1-207ENST00000556821 GCLCP48506 637 aaPredicted RBP27.09■■□□□ 1.93
PABPN1-207ENST00000556821 FAM110CQ1W6H9 321 aa27.09■■□□□ 1.93
PABPN1-207ENST00000556821 IFNL3Q8IZI9 196 aa27.09■■□□□ 1.93
PABPN1-207ENST00000556821 CCDC17Q96LX7 622 aa27.09■■□□□ 1.93
PABPN1-207ENST00000556821 PATL2C9JE40 543 aaKnown RBP27.08■■□□□ 1.93
PABPN1-207ENST00000556821 TDO2P48775 406 aa27.08■■□□□ 1.93
PABPN1-207ENST00000556821 IRX3P78415 501 aaPredicted RBP27.08■■□□□ 1.93
PABPN1-207ENST00000556821 HTATIP2Q9BUP3 242 aa27.08■■□□□ 1.93
PABPN1-207ENST00000556821 SRRDQ9UH36 339 aa27.08■■□□□ 1.93
PABPN1-207ENST00000556821 MINDY4BA8MYZ0 360 aa27.07■■□□□ 1.92
PABPN1-207ENST00000556821 FMNL1O95466 1100 aaPredicted RBP27.07■■□□□ 1.92
PABPN1-207ENST00000556821 APPP05067 770 aa27.07■■□□□ 1.92
PABPN1-207ENST00000556821 VCAM1P19320 739 aa27.07■■□□□ 1.92
PABPN1-207ENST00000556821 MNX1P50219 401 aaPredicted RBP27.07■■□□□ 1.92
PABPN1-207ENST00000556821 USP14P54578 494 aa27.07■■□□□ 1.92
PABPN1-207ENST00000556821 FCGRTP55899 365 aa27.07■■□□□ 1.92
PABPN1-207ENST00000556821 SIAH1Q8IUQ4 282 aa27.07■■□□□ 1.92
PABPN1-207ENST00000556821 P2RX7Q99572 595 aaKnown RBP27.07■■□□□ 1.92
PABPN1-207ENST00000556821 A0A0D9SFI3 127 aa27.06■■□□□ 1.92
PABPN1-207ENST00000556821 HERVK_113P62684 666 aa27.06■■□□□ 1.92
PABPN1-207ENST00000556821 POTEEQ6S8J3 1075 aa27.06■■□□□ 1.92
PABPN1-207ENST00000556821 FAM227BQ96M60 508 aa27.06■■□□□ 1.92
PABPN1-207ENST00000556821 MORF4L1Q9UBU8 362 aa27.06■■□□□ 1.92
PABPN1-207ENST00000556821 NR2E3Q9Y5X4 410 aa27.06■■□□□ 1.92
PABPN1-207ENST00000556821 PEX10O60683 326 aa27.05■■□□□ 1.92
PABPN1-207ENST00000556821 RASA1P20936 1047 aa27.05■■□□□ 1.92
PABPN1-207ENST00000556821 PDE4AP27815 886 aa27.05■■□□□ 1.92
PABPN1-207ENST00000556821 STK11IPQ8N1F8 1099 aa27.05■■□□□ 1.92
PABPN1-207ENST00000556821 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.05■■□□□ 1.92
PABPN1-207ENST00000556821 TXNRD2Q9NNW7 524 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms