RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 TRIM27P14373 513 aa14.53□□□□□ -0.08
ACTN1-221ENST00000556571 OS9Q13438 667 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-221ENST00000556571 TATDN1Q6P1N9 297 aa14.53□□□□□ -0.08
ACTN1-221ENST00000556571 CATSPERGQ6ZRH7 1159 aa14.53□□□□□ -0.08
ACTN1-221ENST00000556571 DDX20Q9UHI6 824 aaKnown RBP14.53□□□□□ -0.08
ACTN1-221ENST00000556571 HOXC6P09630 235 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 CYP7A1P22680 504 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 PTPREP23469 700 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 ZAP70P43403 619 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 DYNLL1P63167 89 aaKnown RBP14.52□□□□□ -0.09
ACTN1-221ENST00000556571 ATP2B2Q01814 1243 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 POLA2Q14181 598 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 ZYXQ15942 572 aaKnown RBP14.52□□□□□ -0.09
ACTN1-221ENST00000556571 WDR78Q5VTH9 848 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 LBX2Q6XYB7 198 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 LPAR1Q92633 364 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 KIAA1683Q9H0B3 1180 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 PIH1D3Q9NQM4 214 aaKnown RBP14.52□□□□□ -0.09
ACTN1-221ENST00000556571 FLRT1Q9NZU1 646 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 PRKAG2Q9UGJ0 569 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 SERPINB13Q9UIV8 391 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 IVNS1ABPQ9Y6Y0 642 aa14.52□□□□□ -0.09
ACTN1-221ENST00000556571 SIPA1L1O43166 1804 aa14.51□□□□□ -0.09
ACTN1-221ENST00000556571 CNGA1P29973 690 aa14.51□□□□□ -0.09
ACTN1-221ENST00000556571 USP5P45974 858 aa14.51□□□□□ -0.09
ACTN1-221ENST00000556571 RAB3GAP1Q15042 981 aa14.51□□□□□ -0.09
ACTN1-221ENST00000556571 TTC6Q86TZ1 520 aa14.51□□□□□ -0.09
ACTN1-221ENST00000556571 FRAT1Q92837 279 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-221ENST00000556571 EHD4Q9H223 541 aa14.51□□□□□ -0.09
ACTN1-221ENST00000556571 NDUFB9Q9Y6M9 179 aa14.51□□□□□ -0.09
ACTN1-221ENST00000556571 DNM1LO00429 736 aa14.5□□□□□ -0.09
ACTN1-221ENST00000556571 SURF6O75683 361 aaKnown RBP14.5□□□□□ -0.09
ACTN1-221ENST00000556571 IDH1O75874 414 aaKnown RBP14.5□□□□□ -0.09
ACTN1-221ENST00000556571 VCAM1P19320 739 aa14.5□□□□□ -0.09
ACTN1-221ENST00000556571 ATP8B2P98198 1209 aa14.5□□□□□ -0.09
ACTN1-221ENST00000556571 GRB14Q14449 540 aa14.5□□□□□ -0.09
ACTN1-221ENST00000556571 ABCB5Q2M3G0 1257 aa14.5□□□□□ -0.09
ACTN1-221ENST00000556571 CERKLQ49MI3 558 aaPredicted RBP14.5□□□□□ -0.09
ACTN1-221ENST00000556571 TMED8Q6PL24 325 aaPredicted RBP14.5□□□□□ -0.09
ACTN1-221ENST00000556571 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.5□□□□□ -0.09
ACTN1-221ENST00000556571 SSH3Q8TE77 659 aa14.5□□□□□ -0.09
ACTN1-221ENST00000556571 CLUAP1Q96AJ1 413 aa14.5□□□□□ -0.09
ACTN1-221ENST00000556571 CABP5Q9NP86 173 aa14.5□□□□□ -0.09
ACTN1-221ENST00000556571 ATN1P54259 1190 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-221ENST00000556571 MIGA1Q8NAN2 632 aa14.49□□□□□ -0.09
ACTN1-221ENST00000556571 ARRDC4Q8NCT1 418 aa14.49□□□□□ -0.09
ACTN1-221ENST00000556571 ACER1Q8TDN7 264 aa14.49□□□□□ -0.09
ACTN1-221ENST00000556571 GUCD1Q96NT3 240 aa14.49□□□□□ -0.09
ACTN1-221ENST00000556571 COL25A1Q9BXS0 654 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-221ENST00000556571 BTBD7Q9P203 1132 aa14.49□□□□□ -0.09
ACTN1-221ENST00000556571 TNNQ9UQP3 1299 aa14.49□□□□□ -0.09
ACTN1-221ENST00000556571 SPDYE16A6NNV3 312 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-221ENST00000556571 STRNO43815 780 aa14.48□□□□□ -0.09
ACTN1-221ENST00000556571 IGHA2P01877 340 aa14.48□□□□□ -0.09
ACTN1-221ENST00000556571 CYP2C19P33261 490 aa14.48□□□□□ -0.09
ACTN1-221ENST00000556571 RTP1P59025 263 aa14.48□□□□□ -0.09
ACTN1-221ENST00000556571 MAGEB6Q8N7X4 407 aa14.48□□□□□ -0.09
ACTN1-221ENST00000556571 NPLOC4Q8TAT6 608 aa14.48□□□□□ -0.09
ACTN1-221ENST00000556571 RPAP3Q9H6T3 665 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-221ENST00000556571 HOXC10Q9NYD6 342 aa14.48□□□□□ -0.09
ACTN1-221ENST00000556571 DBNLQ9UJU6 430 aaKnown RBP14.48□□□□□ -0.09
ACTN1-221ENST00000556571 NOP58Q9Y2X3 529 aaKnown RBP14.48□□□□□ -0.09
ACTN1-221ENST00000556571 UNC80Q8N2C7 3258 aa14.48□□□□□ -0.09
ACTN1-221ENST00000556571 BCAR3O75815 825 aa14.47□□□□□ -0.09
ACTN1-221ENST00000556571 CYBAP13498 195 aa14.47□□□□□ -0.09
ACTN1-221ENST00000556571 MAP3K12Q12852 859 aa14.47□□□□□ -0.09
ACTN1-221ENST00000556571 ZNF697Q5TEC3 545 aa14.47□□□□□ -0.09
ACTN1-221ENST00000556571 OLFML2BQ68BL8 750 aa14.47□□□□□ -0.09
ACTN1-221ENST00000556571 DPP9Q86TI2 863 aa14.47□□□□□ -0.09
ACTN1-221ENST00000556571 TMEM57Q8N5G2 664 aa14.47□□□□□ -0.09
ACTN1-221ENST00000556571 TRPV1Q8NER1 839 aa14.47□□□□□ -0.09
ACTN1-221ENST00000556571 CCDC8Q9H0W5 538 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-221ENST00000556571 MAST2Q6P0Q8 1798 aa14.47□□□□□ -0.09
ACTN1-221ENST00000556571 SHMT1P34896 483 aa14.46□□□□□ -0.09
ACTN1-221ENST00000556571 COG2Q14746 738 aa14.46□□□□□ -0.09
ACTN1-221ENST00000556571 GJC2Q5T442 439 aaPredicted RBP14.46□□□□□ -0.09
ACTN1-221ENST00000556571 EAF2Q96CJ1 260 aaPredicted RBP14.46□□□□□ -0.09
ACTN1-221ENST00000556571 FAM161BQ96MY7 647 aa14.46□□□□□ -0.09
ACTN1-221ENST00000556571 TLR7Q9NYK1 1049 aaKnown RBP14.46□□□□□ -0.09
ACTN1-221ENST00000556571 ATP11BQ9Y2G3 1177 aa14.46□□□□□ -0.09
ACTN1-221ENST00000556571 DNAH12Q6ZR08 3092 aa14.46□□□□□ -0.09
ACTN1-221ENST00000556571 LAMA2P24043 3122 aaKnown RBP14.45□□□□□ -0.1
ACTN1-221ENST00000556571 KBTBD13C9JR72 458 aa14.45□□□□□ -0.1
ACTN1-221ENST00000556571 POLR3DP05423 398 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-221ENST00000556571 ADORA2AP29274 412 aa14.45□□□□□ -0.1
ACTN1-221ENST00000556571 GUCY1A2P33402 732 aa14.45□□□□□ -0.1
ACTN1-221ENST00000556571 PLCD1P51178 756 aa14.45□□□□□ -0.1
ACTN1-221ENST00000556571 ZKSCAN2Q63HK3 967 aa14.45□□□□□ -0.1
ACTN1-221ENST00000556571 SLC39A5Q6ZMH5 540 aa14.45□□□□□ -0.1
ACTN1-221ENST00000556571 SHCBP1Q8NEM2 672 aa14.45□□□□□ -0.1
ACTN1-221ENST00000556571 MOV10L1Q9BXT6 1211 aaKnown RBP14.45□□□□□ -0.1
ACTN1-221ENST00000556571 SLC5A4Q9NY91 659 aa14.45□□□□□ -0.1
ACTN1-221ENST00000556571 FOCADQ5VW36 1801 aa14.45□□□□□ -0.1
ACTN1-221ENST00000556571 CDK5RAP2Q96SN8 1893 aa14.44□□□□□ -0.1
ACTN1-221ENST00000556571 SEPT4O43236 478 aa14.44□□□□□ -0.1
ACTN1-221ENST00000556571 SEPT2Q15019 361 aa14.44□□□□□ -0.1
ACTN1-221ENST00000556571 SHHQ15465 462 aa14.44□□□□□ -0.1
ACTN1-221ENST00000556571 MB21D1Q8N884 522 aa14.44□□□□□ -0.1
ACTN1-221ENST00000556571 RIOK1Q9BRS2 568 aaKnown RBP14.44□□□□□ -0.1
ACTN1-221ENST00000556571 SPATC1LQ9H0A9 340 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms