RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 ICA1Q05084 483 aa16.72■□□□□ 0.27
SNX6-206ENST00000556162 C8orf34Q49A92 452 aa16.72■□□□□ 0.27
SNX6-206ENST00000556162 REM2Q8IYK8 340 aaPredicted RBP16.72■□□□□ 0.27
SNX6-206ENST00000556162 ZIC5Q96T25 663 aa16.72■□□□□ 0.27
SNX6-206ENST00000556162 USP26Q9BXU7 913 aa16.72■□□□□ 0.27
SNX6-206ENST00000556162 B4E1Z4 1266 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 USP17L10C9JJH3 530 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 CETPP11597 493 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 SREBF2Q12772 1141 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 RALYLQ86SE5 291 aaKnown RBP16.71■□□□□ 0.27
SNX6-206ENST00000556162 MS4A4AQ96JQ5 239 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 ARHGEF10LQ9HCE6 1279 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 MYH8P13535 1937 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 KDM4AO75164 1064 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 HSPA4P34932 840 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 BACE1P56817 501 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 ATP2B2Q01814 1243 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 PPP4R3BQ5MIZ7 849 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 NCOA7Q8NI08 942 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 FEZ1Q99689 392 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 TAF6LQ9Y6J9 622 aa16.71■□□□□ 0.27
SNX6-206ENST00000556162 ATAD5Q96QE3 1844 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 PLIN4Q96Q06 1357 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 CCL15-CCL14A0A0B4J2E2 113 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 IGKV6D-41A0A0C4DH26 115 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 C19orf81C9J6K1 198 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 EEF2P13639 858 aaKnown RBP16.7■□□□□ 0.26
SNX6-206ENST00000556162 MCCP23508 829 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 MTMR2Q13614 643 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 CCL15Q16663 113 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 CLEC10AQ8IUN9 316 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 ACER1Q8TDN7 264 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 CEP95Q96GE4 821 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 SH2D4AQ9H788 454 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 MTMR4Q9NYA4 1195 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 ZSWIM5Q9P217 1185 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 LAMA4Q16363 1823 aa16.7■□□□□ 0.26
SNX6-206ENST00000556162 A0A0G2JLL6 359 aaPredicted RBP16.69■□□□□ 0.26
SNX6-206ENST00000556162 TM4SF4P48230 202 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 USP14P54578 494 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 STOX1Q6ZVD7 989 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 FASTKD5Q7L8L6 764 aaKnown RBP16.69■□□□□ 0.26
SNX6-206ENST00000556162 PRRT2Q7Z6L0 340 aaPredicted RBP16.69■□□□□ 0.26
SNX6-206ENST00000556162 IQCA1Q86XH1 822 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 TCP11L1Q9NUJ3 509 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 NYAP2Q9P242 653 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 CLIP2Q9UDT6 1046 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 TESPA1A2RU30 521 aaPredicted RBP16.69■□□□□ 0.26
SNX6-206ENST00000556162 SEC24BO95487 1268 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 TTLL1O95922 423 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 HMGCS2P54868 508 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 KRT32Q14532 448 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 TSGA10IPQ3SY00 556 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 RASEFQ8IZ41 740 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 KIAA1683Q9H0B3 1180 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 IL17RBQ9NRM6 502 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 TMOD4Q9NZQ9 345 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 STX8Q9UNK0 236 aa16.69■□□□□ 0.26
SNX6-206ENST00000556162 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
SNX6-206ENST00000556162 NMT2O60551 498 aa16.68■□□□□ 0.26
SNX6-206ENST00000556162 ZYXQ15942 572 aaKnown RBP16.68■□□□□ 0.26
SNX6-206ENST00000556162 CCDC178Q5BJE1 867 aa16.68■□□□□ 0.26
SNX6-206ENST00000556162 SH3D19Q5HYK7 790 aa16.68■□□□□ 0.26
SNX6-206ENST00000556162 OTUD7BQ6GQQ9 843 aa16.68■□□□□ 0.26
SNX6-206ENST00000556162 USP17L2Q6R6M4 530 aa16.68■□□□□ 0.26
SNX6-206ENST00000556162 NKX2-3Q8TAU0 364 aa16.68■□□□□ 0.26
SNX6-206ENST00000556162 BRI3BPQ8WY22 251 aa16.68■□□□□ 0.26
SNX6-206ENST00000556162 KCNB2Q92953 911 aa16.68■□□□□ 0.26
SNX6-206ENST00000556162 TMX2Q9Y320 296 aa16.68■□□□□ 0.26
SNX6-206ENST00000556162 GADL1Q6ZQY3 521 aa16.67■□□□□ 0.26
SNX6-206ENST00000556162 MKL1Q969V6 931 aa16.67■□□□□ 0.26
SNX6-206ENST00000556162 ZKSCAN3Q9BRR0 538 aa16.67■□□□□ 0.26
SNX6-206ENST00000556162 MAP2K1Q02750 393 aaPredicted RBP16.67■□□□□ 0.26
SNX6-206ENST00000556162 PROCA1Q8NCQ7 364 aaPredicted RBP16.67■□□□□ 0.26
SNX6-206ENST00000556162 TTC14Q96N46 770 aa16.67■□□□□ 0.26
SNX6-206ENST00000556162 NEK1Q96PY6 1258 aa16.67■□□□□ 0.26
SNX6-206ENST00000556162 ZSCAN10Q96SZ4 725 aaPredicted RBP16.67■□□□□ 0.26
SNX6-206ENST00000556162 PTPN18Q99952 460 aa16.67■□□□□ 0.26
SNX6-206ENST00000556162 UBAC1Q9BSL1 405 aa16.67■□□□□ 0.26
SNX6-206ENST00000556162 EMILIN3Q9NT22 766 aa16.67■□□□□ 0.26
SNX6-206ENST00000556162 SNX14Q9Y5W7 946 aa16.67■□□□□ 0.26
SNX6-206ENST00000556162 PHIPQ8WWQ0 1821 aa16.66■□□□□ 0.26
SNX6-206ENST00000556162 MOGSQ13724 837 aa16.66■□□□□ 0.26
SNX6-206ENST00000556162 CYB5R4Q7L1T6 521 aa16.66■□□□□ 0.26
SNX6-206ENST00000556162 IFNL1Q8IU54 200 aa16.66■□□□□ 0.26
SNX6-206ENST00000556162 BTBD19C9JJ37 291 aa16.65■□□□□ 0.26
SNX6-206ENST00000556162 MCM5P33992 734 aa16.65■□□□□ 0.26
SNX6-206ENST00000556162 NOVP48745 357 aa16.65■□□□□ 0.26
SNX6-206ENST00000556162 DGKZQ13574 1117 aa16.65■□□□□ 0.26
SNX6-206ENST00000556162 DGKHQ86XP1 1220 aa16.65■□□□□ 0.26
SNX6-206ENST00000556162 MB21D2Q8IYB1 491 aaPredicted RBP16.65■□□□□ 0.26
SNX6-206ENST00000556162 GOPCQ9HD26 462 aa16.65■□□□□ 0.26
SNX6-206ENST00000556162 SYNPO2Q9UMS6 1093 aa16.65■□□□□ 0.26
SNX6-206ENST00000556162 ERICH2A1L162 156 aa16.65■□□□□ 0.26
SNX6-206ENST00000556162 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.261e-6■□□□□ 8.5
SNX6-206ENST00000556162 RAD21O60216 631 aa16.65■□□□□ 0.26
SNX6-206ENST00000556162 ALDH1A1P00352 501 aa16.65■□□□□ 0.26
SNX6-206ENST00000556162 SART3Q15020 963 aaKnown RBP16.65■□□□□ 0.26
SNX6-206ENST00000556162 ANKRD23Q86SG2 305 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms