RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CYB5D2Q8WUJ1 264 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 HRASLS5Q96KN8 279 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 TGIF2Q9GZN2 237 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-213ENST00000554776 PCDHB14Q9Y5E9 798 aa5.07□□□□□ -1.6
SCFD1-213ENST00000554776 PRR33A8MZF0 331 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 CHURC1-FNTBB4DL54 471 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 CYP7A1P22680 504 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 ETV3P41162 512 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 KIR3DL1P43629 444 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 CLCN7P51798 805 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 APOBRQ0VD83 1088 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 BNIP3Q12983 259 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 AOC3Q16853 763 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 SEZ6Q53EL9 994 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 ZNF574Q6ZN55 896 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-213ENST00000554776 SPRED2Q7Z698 418 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 TP53INP2Q8IXH6 220 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 ABI1Q8IZP0 508 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 REXO1Q8N1G1 1221 aaKnown RBP5.06□□□□□ -1.6
SCFD1-213ENST00000554776 MFSD4AQ8N468 514 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 EHMT1Q9H9B1 1298 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 KLHL3Q9UH77 587 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 CEP131Q9UPN4 1083 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 CAPN6Q9Y6Q1 641 aa5.06□□□□□ -1.6
SCFD1-213ENST00000554776 CD8BP10966 210 aa5.05□□□□□ -1.6
SCFD1-213ENST00000554776 ERCC5P28715 1186 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-213ENST00000554776 GJA8P48165 433 aa5.05□□□□□ -1.6
SCFD1-213ENST00000554776 PAK2Q13177 524 aa5.05□□□□□ -1.6
SCFD1-213ENST00000554776 AGBL5Q8NDL9 886 aa5.05□□□□□ -1.6
SCFD1-213ENST00000554776 NKD1Q969G9 470 aa5.05□□□□□ -1.6
SCFD1-213ENST00000554776 ACBD3Q9H3P7 528 aa5.05□□□□□ -1.6
SCFD1-213ENST00000554776 ADGRE2Q9UHX3 823 aa5.05□□□□□ -1.6
SCFD1-213ENST00000554776 PITPNM2Q9BZ72 1349 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 SLC22A31A6NKX4 558 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 FAM155AB1AL88 458 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-213ENST00000554776 RBAK-RBAKDNI3L0D1 243 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 CBX7O95931 251 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 FUT4P22083 530 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 CD96P40200 585 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 ZNF165P49910 485 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 CLCQ05315 142 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 MLECQ14165 292 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 CBLL1Q75N03 491 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 RASGRP4Q8TDF6 673 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 ASB11Q8WXH4 323 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 CCDC74BQ96LY2 380 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 SEMA3GQ9NS98 782 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 GMIPQ9P107 970 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 ST14Q9Y5Y6 855 aa5.04□□□□□ -1.6
SCFD1-213ENST00000554776 COL17A1Q9UMD9 1497 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-213ENST00000554776 RGS13O14921 159 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 MCM4P33991 863 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 TNNI2P48788 182 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 IRAK1P51617 712 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 TNK2Q07912 1038 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 OVOS1Q6IE37 1185 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 GK5Q6ZS86 529 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 THAP5Q7Z6K1 395 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 BAHD1Q8TBE0 780 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-213ENST00000554776 PIWIL2Q8TC59 973 aaKnown RBP5.03□□□□□ -1.6
SCFD1-213ENST00000554776 RNF141Q8WVD5 230 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 GPRASP2Q96D09 838 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 Q96M66 194 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 HSPA12BQ96MM6 686 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 CCSER2Q9H7U1 834 aa5.03□□□□□ -1.6
SCFD1-213ENST00000554776 MEIS3P2A8K0S8 358 aa5.02□□□□□ -1.61
SCFD1-213ENST00000554776 IGSF3O75054 1194 aa5.02□□□□□ -1.61
SCFD1-213ENST00000554776 ARSHQ5FYA8 562 aa5.02□□□□□ -1.61
SCFD1-213ENST00000554776 ANGEL2Q5VTE6 544 aaKnown RBP5.02□□□□□ -1.61
SCFD1-213ENST00000554776 CDKAL1Q5VV42 579 aa5.02□□□□□ -1.61
SCFD1-213ENST00000554776 CDCP2Q5VXM1 449 aa5.02□□□□□ -1.61
SCFD1-213ENST00000554776 PHACTR4Q8IZ21 702 aa5.02□□□□□ -1.61
SCFD1-213ENST00000554776 ATG4CQ96DT6 458 aa5.02□□□□□ -1.61
SCFD1-213ENST00000554776 KIF2CQ99661 725 aa5.02□□□□□ -1.61
SCFD1-213ENST00000554776 TINF2Q9BSI4 451 aa5.02□□□□□ -1.61
SCFD1-213ENST00000554776 CNNM2Q9H8M5 875 aa5.02□□□□□ -1.61
SCFD1-213ENST00000554776 ZNRF3Q9ULT6 936 aa5.02□□□□□ -1.61
SCFD1-213ENST00000554776 H3BS24 57 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 UBOX5O94941 541 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 RAG1P15918 1043 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 SOX9P48436 509 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 IKZF1Q13422 519 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 PLCL1Q15111 1095 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 LRRFIP1Q32MZ4 808 aaKnown RBP5.01□□□□□ -1.61
SCFD1-213ENST00000554776 MCTP1Q6DN14 999 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 NLRC3Q7RTR2 1065 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 TMEM40Q8WWA1 233 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 VWCEQ96DN2 955 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 SPATA32Q96LK8 384 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 KREMEN1Q96MU8 473 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 ASPNQ9BXN1 380 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 GINM1Q9NU53 330 aa5.01□□□□□ -1.61
SCFD1-213ENST00000554776 SRFP11831 508 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 IMPDH2P12268 514 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 NME1P15531 152 aaKnown RBP5□□□□□ -1.61
SCFD1-213ENST00000554776 GBP1P32455 592 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 CCNFP41002 786 aa5□□□□□ -1.61
SCFD1-213ENST00000554776 COL9A2Q14055 689 aaPredicted RBP5□□□□□ -1.61
SCFD1-213ENST00000554776 ZNF792Q3KQV3 632 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms