RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 DDX54Q8TDD1 881 aaKnown RBP5.96□□□□□ -1.46
VTI1B-203ENST00000554636 C8orf37Q96NL8 207 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 HIRIP3Q9BW71 556 aaPredicted RBP5.96□□□□□ -1.46
VTI1B-203ENST00000554636 BCO2Q9BYV7 579 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 ZFP64Q9NPA5 681 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 RAD18Q9NS91 495 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 GPN3Q9UHW5 284 aaPredicted RBP5.96□□□□□ -1.46
VTI1B-203ENST00000554636 AP4E1Q9UPM8 1137 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 RGS12O14924 1447 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 ATRNO75882 1429 aa5.96□□□□□ -1.46
VTI1B-203ENST00000554636 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.96□□□□□ -1.46
VTI1B-203ENST00000554636 TIAF1O95411 115 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 ADH5P11766 374 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 RAB6AP20340 208 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 USP11P51784 963 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 LRP8Q14114 963 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 DSC3Q14574 896 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 ARTNQ5T4W7 220 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 NXPE4Q6UWF7 544 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 KRT28Q7Z3Y7 464 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 FBXL6Q8N531 539 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 FBLIM1Q8WUP2 373 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 MFSD14AQ96MC6 490 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 TRAIPQ9BWF2 469 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 RNF112Q9ULX5 631 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 AKAP2Q9Y2D5 859 aa5.95□□□□□ -1.46
VTI1B-203ENST00000554636 SLIT2O94813 1529 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 GPRASP1Q5JY77 1395 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 GSC2O15499 205 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 SOX4Q06945 474 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-203ENST00000554636 TRIM26Q12899 539 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-203ENST00000554636 ENOX2Q16206 610 aaKnown RBP5.94□□□□□ -1.46
VTI1B-203ENST00000554636 RNF43Q68DV7 783 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 CDPF1Q6NVV7 123 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 DYMQ7RTS9 669 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 NBPF11Q86T75 865 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 CLEC10AQ8IUN9 316 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 ZSCAN29Q8IWY8 852 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-203ENST00000554636 C2CD4AQ8NCU7 369 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-203ENST00000554636 PMFBP1Q8TBY8 1022 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 FAM83CQ9BQN1 747 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 WWC3Q9ULE0 1092 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 ACTL7BQ9Y614 415 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 BCL9LQ86UU0 1499 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 RALGAPBQ86X10 1494 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 PLCH1Q4KWH8 1693 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 CENPJQ9HC77 1338 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-203ENST00000554636 NRAPQ86VF7 1730 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 NWD2Q9ULI1 1742 aa5.94□□□□□ -1.46
VTI1B-203ENST00000554636 POLR3AO14802 1390 aaPredicted RBP5.93□□□□□ -1.46
VTI1B-203ENST00000554636 ARHGEF10O15013 1369 aa5.93□□□□□ -1.46
VTI1B-203ENST00000554636 GLI3P10071 1580 aa5.93□□□□□ -1.46
VTI1B-203ENST00000554636 PHRF1Q9P1Y6 1649 aaKnown RBP5.93□□□□□ -1.46
VTI1B-203ENST00000554636 HYAL3O43820 417 aaPredicted RBP5.93□□□□□ -1.46
VTI1B-203ENST00000554636 RBM6P78332 1123 aaKnown RBP5.93□□□□□ -1.46
VTI1B-203ENST00000554636 NFKBIBQ15653 356 aa5.93□□□□□ -1.46
VTI1B-203ENST00000554636 NBPF8Q3BBV2 869 aa5.93□□□□□ -1.46
VTI1B-203ENST00000554636 SHKBP1Q8TBC3 707 aa5.93□□□□□ -1.46
VTI1B-203ENST00000554636 ASB16Q96NS5 453 aa5.93□□□□□ -1.46
VTI1B-203ENST00000554636 DBNDD2Q9BQY9 259 aa5.93□□□□□ -1.46
VTI1B-203ENST00000554636 CDK19Q9BWU1 502 aa5.93□□□□□ -1.46
VTI1B-203ENST00000554636 SUGCTQ9HAC7 445 aa5.93□□□□□ -1.46
VTI1B-203ENST00000554636 PPP4R2Q9NY27 417 aa5.93□□□□□ -1.46
VTI1B-203ENST00000554636 HIF3AQ9Y2N7 669 aa5.93□□□□□ -1.46
VTI1B-203ENST00000554636 ROCK2O75116 1388 aaKnown RBP5.93□□□□□ -1.46
VTI1B-203ENST00000554636 FAM95CA0A1B0GW59 222 aa5.92□□□□□ -1.46
VTI1B-203ENST00000554636 WDR64B1ANS9 1081 aa5.92□□□□□ -1.46
VTI1B-203ENST00000554636 LIG1P18858 919 aa5.92□□□□□ -1.46
VTI1B-203ENST00000554636 PTPN12Q05209 780 aaKnown RBP5.92□□□□□ -1.46
VTI1B-203ENST00000554636 FMR1Q06787 632 aaKnown RBP eCLIP5.92□□□□□ -1.46
VTI1B-203ENST00000554636 HP1BP3Q5SSJ5 553 aaPredicted RBP5.92□□□□□ -1.46
VTI1B-203ENST00000554636 ZDHHC13Q8IUH4 622 aa5.92□□□□□ -1.46
VTI1B-203ENST00000554636 LGR6Q9HBX8 967 aa5.92□□□□□ -1.46
VTI1B-203ENST00000554636 FAM105AQ9NUU6 356 aa5.92□□□□□ -1.46
VTI1B-203ENST00000554636 PCMTD2Q9NV79 361 aa5.92□□□□□ -1.46
VTI1B-203ENST00000554636 TRPC5Q9UL62 973 aaPredicted RBP5.92□□□□□ -1.46
VTI1B-203ENST00000554636 NRKQ7Z2Y5 1582 aa5.92□□□□□ -1.46
VTI1B-203ENST00000554636 COL14A1Q05707 1796 aaKnown RBP5.91□□□□□ -1.46
VTI1B-203ENST00000554636 EIF4EBP3O60516 100 aaPredicted RBP5.91□□□□□ -1.46
VTI1B-203ENST00000554636 FBXO24O75426 580 aa5.91□□□□□ -1.46
VTI1B-203ENST00000554636 P4HBP07237 508 aaKnown RBP5.91□□□□□ -1.46
VTI1B-203ENST00000554636 PDIA4P13667 645 aaKnown RBP5.91□□□□□ -1.46
VTI1B-203ENST00000554636 AP3B2Q13367 1082 aa5.91□□□□□ -1.46
VTI1B-203ENST00000554636 SHISA5Q8N114 240 aa5.91□□□□□ -1.46
VTI1B-203ENST00000554636 WDR89Q96FK6 387 aaPredicted RBP5.91□□□□□ -1.46
VTI1B-203ENST00000554636 WDR18Q9BV38 432 aa5.91□□□□□ -1.46
VTI1B-203ENST00000554636 CCDC86Q9H6F5 360 aaKnown RBP5.91□□□□□ -1.46
VTI1B-203ENST00000554636 TONSLQ96HA7 1378 aa5.91□□□□□ -1.46
VTI1B-203ENST00000554636 SBNO2Q9Y2G9 1366 aa5.91□□□□□ -1.46
VTI1B-203ENST00000554636 PPIP5K1Q6PFW1 1433 aa5.91□□□□□ -1.46
VTI1B-203ENST00000554636 AKAP12Q02952 1782 aa5.9□□□□□ -1.46
VTI1B-203ENST00000554636 AOC2O75106 756 aa5.9□□□□□ -1.46
VTI1B-203ENST00000554636 NFICP08651 508 aa5.9□□□□□ -1.46
VTI1B-203ENST00000554636 ATP2B2Q01814 1243 aa5.9□□□□□ -1.46
VTI1B-203ENST00000554636 RPS26P11Q5JNZ5 115 aaPredicted RBP5.9□□□□□ -1.46
VTI1B-203ENST00000554636 PAOXQ6QHF9 649 aa5.9□□□□□ -1.46
VTI1B-203ENST00000554636 TPTE2Q6XPS3 522 aa5.9□□□□□ -1.46
VTI1B-203ENST00000554636 UNC5CLQ8IV45 518 aa5.9□□□□□ -1.46
VTI1B-203ENST00000554636 NGDNQ8NEJ9 315 aaKnown RBP5.9□□□□□ -1.46
VTI1B-203ENST00000554636 STK35Q8TDR2 534 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms