RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 RPS6KA4O75676 772 aa14.06□□□□□ -0.16
HDAC7-230ENST00000552960 PARP10Q53GL7 1025 aa14.06□□□□□ -0.16
HDAC7-230ENST00000552960 APOA5Q6Q788 366 aa14.06□□□□□ -0.16
HDAC7-230ENST00000552960 TBC1D10CQ8IV04 446 aa14.06□□□□□ -0.16
HDAC7-230ENST00000552960 TULP2O00295 520 aa14.06□□□□□ -0.16
HDAC7-230ENST00000552960 KIF5CO60282 957 aa14.06□□□□□ -0.16
HDAC7-230ENST00000552960 ONECUT3O60422 494 aaPredicted RBP14.06□□□□□ -0.16
HDAC7-230ENST00000552960 CUTAO60888 179 aa14.06□□□□□ -0.16
HDAC7-230ENST00000552960 N4BP1O75113 896 aaKnown RBP14.06□□□□□ -0.16
HDAC7-230ENST00000552960 SAFBQ15424 915 aaKnown RBP eCLIP14.06□□□□□ -0.16
HDAC7-230ENST00000552960 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.06□□□□□ -0.16
HDAC7-230ENST00000552960 RTCBQ9Y3I0 505 aaKnown RBP14.06□□□□□ -0.16
HDAC7-230ENST00000552960 COL5A3P25940 1745 aaPredicted RBP14.06□□□□□ -0.16
HDAC7-230ENST00000552960 ANKRD65E5RJM6 399 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 LEKR1Q6ZMV7 388 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 USP49Q70CQ1 688 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 FCHSD1Q86WN1 690 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 SMYD4Q8IYR2 804 aaPredicted RBP14.05□□□□□ -0.16
HDAC7-230ENST00000552960 STAMQ92783 540 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 ZMYM6O95789 1325 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 CNTNAP4Q9C0A0 1308 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 AKR1B15C9JRZ8 316 aaPredicted RBP14.05□□□□□ -0.16
HDAC7-230ENST00000552960 ZPR1O75312 459 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 KLRK1P26718 216 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 CHRNDQ07001 517 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 CCDC152Q4G0S7 254 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 IGSF22Q8N9C0 903 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 NUP133Q8WUM0 1156 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 KIFC2Q96AC6 838 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 CWC15Q9P013 229 aaKnown RBP14.05□□□□□ -0.16
HDAC7-230ENST00000552960 ATRNO75882 1429 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 MYH15Q9Y2K3 1946 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 IFIT3O14879 490 aaKnown RBP14.05□□□□□ -0.16
HDAC7-230ENST00000552960 FGFR2P21802 821 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 GUCY1A2P33402 732 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 SSRP1Q08945 709 aaKnown RBP14.05□□□□□ -0.16
HDAC7-230ENST00000552960 NR5A1Q13285 461 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 RSRC2Q7L4I2 434 aaKnown RBP14.05□□□□□ -0.16
HDAC7-230ENST00000552960 MAP3K14Q99558 947 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 NARFQ9UHQ1 456 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 ZNF652Q9Y2D9 606 aa14.05□□□□□ -0.16
HDAC7-230ENST00000552960 ZFYP08048 801 aaPredicted RBP14.04□□□□□ -0.16
HDAC7-230ENST00000552960 RBL2Q08999 1139 aa14.04□□□□□ -0.16
HDAC7-230ENST00000552960 DIS3L2Q8IYB7 885 aaKnown RBP14.04□□□□□ -0.16
HDAC7-230ENST00000552960 WWC3Q9ULE0 1092 aa14.04□□□□□ -0.16
HDAC7-230ENST00000552960 SLC12A7Q9Y666 1083 aa14.04□□□□□ -0.16
HDAC7-230ENST00000552960 MYO1CO00159 1063 aa14.04□□□□□ -0.16
HDAC7-230ENST00000552960 PES1O00541 588 aaKnown RBP14.04□□□□□ -0.16
HDAC7-230ENST00000552960 ATP8B1O43520 1251 aa14.04□□□□□ -0.16
HDAC7-230ENST00000552960 RANBP6O60518 1105 aaKnown RBP14.04□□□□□ -0.16
HDAC7-230ENST00000552960 CCT6AP40227 531 aaKnown RBP14.04□□□□□ -0.16
HDAC7-230ENST00000552960 CTDSPL2Q05D32 466 aa14.04□□□□□ -0.16
HDAC7-230ENST00000552960 RASGRF1Q13972 1273 aa14.04□□□□□ -0.16
HDAC7-230ENST00000552960 NBPF5PQ86XG9 351 aaPredicted RBP14.04□□□□□ -0.16
HDAC7-230ENST00000552960 SETDB2Q96T68 719 aa14.04□□□□□ -0.16
HDAC7-230ENST00000552960 CDC5LQ99459 802 aaKnown RBP14.04□□□□□ -0.16
HDAC7-230ENST00000552960 RASSF4Q9H2L5 321 aa14.04□□□□□ -0.16
HDAC7-230ENST00000552960 MYH3P11055 1940 aa14.04□□□□□ -0.16
HDAC7-230ENST00000552960 RAD9BQ6WBX8 426 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 PLEKHA4Q9H4M7 779 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 DDX60Q8IY21 1712 aaKnown RBP14.03□□□□□ -0.16
HDAC7-230ENST00000552960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.03□□□□□ -0.16
HDAC7-230ENST00000552960 GYG1P46976 350 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 PUM3Q15397 648 aaKnown RBP14.03□□□□□ -0.16
HDAC7-230ENST00000552960 HSP90B2PQ58FF3 399 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 CLEC4GQ6UXB4 293 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 PROM2Q8N271 834 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 ACRBPQ8NEB7 543 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 PNKPQ96T60 521 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.03□□□□□ -0.163e-7■■■■□ 23.5
HDAC7-230ENST00000552960 ABCB6Q9NP58 842 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 FAN1Q9Y2M0 1017 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 PCDHB6Q9Y5E3 794 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 RREB1Q92766 1687 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 CCDC151A5D8V7 595 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 SRGAP1Q7Z6B7 1085 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 DACH1Q9UI36 760 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 JAG2Q9Y219 1238 aa14.03□□□□□ -0.16
HDAC7-230ENST00000552960 hCG_1642624A0A1W2PR95 340 aa14.02□□□□□ -0.16
HDAC7-230ENST00000552960 RFC4P35249 363 aa14.02□□□□□ -0.16
HDAC7-230ENST00000552960 IGHMBP2P38935 993 aaKnown RBP14.02□□□□□ -0.16
HDAC7-230ENST00000552960 TBX2Q13207 712 aaPredicted RBP14.02□□□□□ -0.16
HDAC7-230ENST00000552960 NOSTRINQ8IVI9 506 aa14.02□□□□□ -0.16
HDAC7-230ENST00000552960 GDAP1L1Q96MZ0 367 aa14.02□□□□□ -0.16
HDAC7-230ENST00000552960 CABP5Q9NP86 173 aa14.02□□□□□ -0.16
HDAC7-230ENST00000552960 SH2B2O14492 632 aaPredicted RBP14.02□□□□□ -0.17
HDAC7-230ENST00000552960 ABL1P00519 1130 aa14.02□□□□□ -0.17
HDAC7-230ENST00000552960 CASP14P31944 242 aa14.02□□□□□ -0.17
HDAC7-230ENST00000552960 PAXIP1Q6ZW49 1069 aaPredicted RBP14.02□□□□□ -0.17
HDAC7-230ENST00000552960 KRT27Q7Z3Y8 459 aa14.02□□□□□ -0.17
HDAC7-230ENST00000552960 SLC35F6Q8N357 371 aa14.02□□□□□ -0.17
HDAC7-230ENST00000552960 MLKLQ8NB16 471 aa14.02□□□□□ -0.17
HDAC7-230ENST00000552960 LPIN2Q92539 896 aa14.02□□□□□ -0.17
HDAC7-230ENST00000552960 AIDAQ96BJ3 306 aa14.02□□□□□ -0.17
HDAC7-230ENST00000552960 NBPF3Q9H094 633 aa14.02□□□□□ -0.17
HDAC7-230ENST00000552960 ERLIN1O75477 346 aa14.02□□□□□ -0.17
HDAC7-230ENST00000552960 AKAP17AQ02040 695 aaKnown RBP14.02□□□□□ -0.17
HDAC7-230ENST00000552960 RGS22Q8NE09 1264 aa14.02□□□□□ -0.17
HDAC7-230ENST00000552960 TSPYL1Q9H0U9 437 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms