RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SIAH1Q8IUQ4 282 aa15.72■□□□□ 0.11
NPAS3-209ENST00000551008 SHISA4Q96DD7 197 aa15.72■□□□□ 0.11
NPAS3-209ENST00000551008 STRBPQ96SI9 672 aaKnown RBP15.72■□□□□ 0.11
NPAS3-209ENST00000551008 KIAA1683Q9H0B3 1180 aa15.72■□□□□ 0.11
NPAS3-209ENST00000551008 ATP8A2Q9NTI2 1148 aa15.72■□□□□ 0.11
NPAS3-209ENST00000551008 COL11A1P12107 1806 aaPredicted RBP15.72■□□□□ 0.11
NPAS3-209ENST00000551008 USP17L12C9JPN9 530 aa15.71■□□□□ 0.11
NPAS3-209ENST00000551008 USP17L21D6R901 530 aa15.71■□□□□ 0.11
NPAS3-209ENST00000551008 GRK4P32298 578 aa15.71■□□□□ 0.11
NPAS3-209ENST00000551008 HERVK_113P62684 666 aa15.71■□□□□ 0.11
NPAS3-209ENST00000551008 RAB3GAP1Q15042 981 aa15.71■□□□□ 0.11
NPAS3-209ENST00000551008 ZYXQ15942 572 aaKnown RBP15.71■□□□□ 0.11
NPAS3-209ENST00000551008 KIAA1755Q5JYT7 1200 aa15.71■□□□□ 0.11
NPAS3-209ENST00000551008 USP17L2Q6R6M4 530 aa15.71■□□□□ 0.11
NPAS3-209ENST00000551008 EPB41L4AQ9HCS5 686 aaPredicted RBP15.71■□□□□ 0.11
NPAS3-209ENST00000551008 TMOD4Q9NZQ9 345 aa15.71■□□□□ 0.11
NPAS3-209ENST00000551008 RBPJLQ9UBG7 517 aa15.71■□□□□ 0.11
NPAS3-209ENST00000551008 TTC41PQ6P2S7 1318 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 GSG1L2A8MUP6 293 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 M0R2C6 588 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 CNMDO75829 334 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 AKR1B1P15121 316 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 ELNP15502 786 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 HOXD10P28358 340 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 PABPC4Q13310 644 aaKnown RBP eCLIP15.7■□□□□ 0.1
NPAS3-209ENST00000551008 HDAC1Q13547 482 aaPredicted RBP15.7■□□□□ 0.1
NPAS3-209ENST00000551008 CTR9Q6PD62 1173 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 NBPF11Q86T75 865 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 RAET1EQ8TD07 263 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 APPBP2Q92624 585 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 GJD2Q9UKL4 321 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 SLC4A4Q9Y6R1 1079 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 MYH4Q9Y623 1939 aa15.7■□□□□ 0.1
NPAS3-209ENST00000551008 CEP290O15078 2479 aa15.69■□□□□ 0.1
NPAS3-209ENST00000551008 ALPK3Q96L96 1907 aa15.69■□□□□ 0.1
NPAS3-209ENST00000551008 TNPO2O14787 897 aaKnown RBP15.69■□□□□ 0.1
NPAS3-209ENST00000551008 VCAM1P19320 739 aa15.69■□□□□ 0.1
NPAS3-209ENST00000551008 IRX3P78415 501 aaPredicted RBP15.69■□□□□ 0.1
NPAS3-209ENST00000551008 IRF5Q13568 498 aa15.69■□□□□ 0.1
NPAS3-209ENST00000551008 Q3C1V9 767 aa15.69■□□□□ 0.1
NPAS3-209ENST00000551008 C16orf86Q6ZW13 317 aa15.69■□□□□ 0.1
NPAS3-209ENST00000551008 ROBO3Q96MS0 1386 aa15.68■□□□□ 0.1
NPAS3-209ENST00000551008 FOXP2O15409 715 aa15.68■□□□□ 0.1
NPAS3-209ENST00000551008 RNF113AO15541 343 aaKnown RBP15.68■□□□□ 0.1
NPAS3-209ENST00000551008 ADCY3O60266 1144 aa15.68■□□□□ 0.1
NPAS3-209ENST00000551008 MX1P20591 662 aa15.68■□□□□ 0.1
NPAS3-209ENST00000551008 CDK8P49336 464 aa15.68■□□□□ 0.1
NPAS3-209ENST00000551008 ZSCAN25Q6NSZ9 544 aa15.68■□□□□ 0.1
NPAS3-209ENST00000551008 SLAIN1Q8ND83 568 aa15.68■□□□□ 0.1
NPAS3-209ENST00000551008 GPATCH3Q96I76 525 aa15.68■□□□□ 0.1
NPAS3-209ENST00000551008 SEC62Q99442 399 aaKnown RBP15.68■□□□□ 0.1
NPAS3-209ENST00000551008 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.68■□□□□ 0.1
NPAS3-209ENST00000551008 PORCNQ9H237 461 aa15.68■□□□□ 0.1
NPAS3-209ENST00000551008 SWAP70Q9UH65 585 aa15.68■□□□□ 0.1
NPAS3-209ENST00000551008 FRMPD3Q5JV73 1810 aa15.68■□□□□ 0.1
NPAS3-209ENST00000551008 GPAA1O43292 621 aa15.67■□□□□ 0.1
NPAS3-209ENST00000551008 GLRX3O76003 335 aaKnown RBP15.67■□□□□ 0.1
NPAS3-209ENST00000551008 CCL5P13501 91 aa15.67■□□□□ 0.1
NPAS3-209ENST00000551008 CATSPERGQ6ZRH7 1159 aa15.67■□□□□ 0.1
NPAS3-209ENST00000551008 TMEM179Q6ZVK1 233 aa15.67■□□□□ 0.1
NPAS3-209ENST00000551008 FEZ1Q99689 392 aa15.67■□□□□ 0.1
NPAS3-209ENST00000551008 UNC93B1Q9H1C4 597 aa15.67■□□□□ 0.1
NPAS3-209ENST00000551008 CABP5Q9NP86 173 aa15.67■□□□□ 0.1
NPAS3-209ENST00000551008 ZNF236Q9UL36 1845 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 SPDYE16A6NNV3 312 aaPredicted RBP15.66■□□□□ 0.1
NPAS3-209ENST00000551008 INHAP05111 366 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 ERVK-9P63128 1117 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 ERVK-24P63145 666 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 SBK1Q52WX2 424 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 ANKRD45Q5TZF3 282 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 UBE2Q1Q7Z7E8 422 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 EXOC6Q8TAG9 804 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 PXYLP1Q8TE99 480 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 TMEM106CQ9BVX2 250 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 STAP2Q9UGK3 403 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 TAOK2Q9UL54 1235 aa15.66■□□□□ 0.1
NPAS3-209ENST00000551008 ZNFX1Q9P2E3 1918 aaKnown RBP15.66■□□□□ 0.1
NPAS3-209ENST00000551008 USP17L15C9J2P7 530 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 USP17L13C9JLJ4 530 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 USP17L11C9JVI0 530 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 USP17L18D6R9N7 530 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 USP17L22D6RA61 530 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 USP17L17D6RBQ6 530 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 USP17L19D6RCP7 530 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 USP17L20D6RJB6 530 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 MPHOSPH10O00566 681 aaKnown RBP15.65■□□□□ 0.1
NPAS3-209ENST00000551008 USP14P54578 494 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 USP17L24Q0WX57 530 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 TRIM32Q13049 653 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 ZMYM1Q5SVZ6 1142 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 LBX2Q6XYB7 198 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 SMC5Q8IY18 1101 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 USP6NLQ92738 828 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 COA7Q96BR5 231 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 PAGR1Q9BTK6 254 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 RPAP3Q9H6T3 665 aaPredicted RBP15.65■□□□□ 0.1
NPAS3-209ENST00000551008 BTBD7Q9P203 1132 aa15.65■□□□□ 0.1
NPAS3-209ENST00000551008 ERC2O15083 957 aa15.64■□□□□ 0.09
NPAS3-209ENST00000551008 IGHDP01880 384 aa15.64■□□□□ 0.09
NPAS3-209ENST00000551008 GJB1P08034 283 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms