RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
CHFR-223ENST00000544268 LDHBP07195 334 aaKnown RBP17.21■□□□□ 0.35
CHFR-223ENST00000544268 PFKFB1P16118 471 aa17.21■□□□□ 0.35
CHFR-223ENST00000544268 NTRK3Q16288 839 aa17.21■□□□□ 0.35
CHFR-223ENST00000544268 TPD52L1Q16890 204 aaPredicted RBP17.21■□□□□ 0.35
CHFR-223ENST00000544268 TMEM67Q5HYA8 995 aa17.21■□□□□ 0.35
CHFR-223ENST00000544268 CEP135Q66GS9 1140 aa17.21■□□□□ 0.35
CHFR-223ENST00000544268 SLC16A10Q8TF71 515 aa17.21■□□□□ 0.35
CHFR-223ENST00000544268 UPF1Q92900 1129 aaKnown RBP eCLIP17.21■□□□□ 0.351e-7■■■□□ 15.9
CHFR-223ENST00000544268 POLR3EQ9NVU0 708 aa17.21■□□□□ 0.35
CHFR-223ENST00000544268 TDO2P48775 406 aa17.2■□□□□ 0.34
CHFR-223ENST00000544268 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
CHFR-223ENST00000544268 AATFQ9NY61 560 aaKnown RBP eCLIP17.2■□□□□ 0.34
CHFR-223ENST00000544268 FEZ2Q9UHY8 353 aaPredicted RBP17.2■□□□□ 0.34
CHFR-223ENST00000544268 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
CHFR-223ENST00000544268 CHD4Q14839 1912 aa17.2■□□□□ 0.34
CHFR-223ENST00000544268 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.2■□□□□ 0.34
CHFR-223ENST00000544268 NACAP1Q9BZK3 213 aa17.2■□□□□ 0.34
CHFR-223ENST00000544268 ZC3H12CQ9C0D7 883 aaKnown RBP17.2■□□□□ 0.34
CHFR-223ENST00000544268 C10orf71Q711Q0 1435 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 CTAGE5O15320 804 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 HNRNPH2P55795 449 aaKnown RBP17.19■□□□□ 0.34
CHFR-223ENST00000544268 EVX2Q03828 476 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 CNKSR1Q969H4 720 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 NOL10Q9BSC4 688 aaKnown RBP17.19■□□□□ 0.34
CHFR-223ENST00000544268 SLC26A6Q9BXS9 759 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 KIAA1468Q9P260 1216 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 KCNJ14Q9UNX9 436 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 GOLGA8AA7E2F4 631 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 IFIT3O14879 490 aaKnown RBP17.19■□□□□ 0.34
CHFR-223ENST00000544268 ZBTB43O43298 467 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 DIXDC1Q155Q3 683 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 ATL3Q6DD88 541 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 FBXO38Q6PIJ6 1188 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 ERO1AQ96HE7 468 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 ANO10Q9NW15 660 aa17.19■□□□□ 0.34
CHFR-223ENST00000544268 ZBTB7AO95365 584 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 GRIN1Q05586 938 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 DOK7Q18PE1 504 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 SHC4Q6S5L8 630 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 NBPF11Q86T75 865 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 LRRC8AQ8IWT6 810 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 KCNG4Q8TDN1 519 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 COA1Q9GZY4 146 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 ZNF215Q9UL58 517 aaPredicted RBP17.18■□□□□ 0.34
CHFR-223ENST00000544268 A0A1W2PQ27 194 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 A0A1W2PQ64 194 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 A0A1W2PQD8 194 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 YEATS4O95619 227 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 MFSD14BQ5SR56 506 aa17.18■□□□□ 0.34
CHFR-223ENST00000544268 GTF2IP78347 998 aa17.17■□□□□ 0.34
CHFR-223ENST00000544268 BMS1Q14692 1282 aaKnown RBP17.17■□□□□ 0.34
CHFR-223ENST00000544268 BRAPQ7Z569 592 aa17.17■□□□□ 0.34
CHFR-223ENST00000544268 CEP57L1Q8IYX8 460 aa17.17■□□□□ 0.34
CHFR-223ENST00000544268 C7orf43Q8WVR3 580 aa17.17■□□□□ 0.34
CHFR-223ENST00000544268 TRMT1Q9NXH9 659 aaKnown RBP17.17■□□□□ 0.34
CHFR-223ENST00000544268 CYP2D7A0A087X1C5 515 aa17.17■□□□□ 0.34
CHFR-223ENST00000544268 hCG_1642624A0A1W2PR95 340 aa17.17■□□□□ 0.34
CHFR-223ENST00000544268 FOXN1O15353 648 aa17.17■□□□□ 0.34
CHFR-223ENST00000544268 PNOCQ13519 176 aa17.17■□□□□ 0.34
CHFR-223ENST00000544268 SARM1Q6SZW1 724 aa17.17■□□□□ 0.34
CHFR-223ENST00000544268 BAZ2AQ9UIF9 1905 aaKnown RBP17.16■□□□□ 0.34
CHFR-223ENST00000544268 SLC3A2P08195 630 aaKnown RBP17.16■□□□□ 0.34
CHFR-223ENST00000544268 IARSP41252 1262 aaKnown RBP17.16■□□□□ 0.34
CHFR-223ENST00000544268 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
CHFR-223ENST00000544268 SLC39A14Q15043 492 aa17.16■□□□□ 0.34
CHFR-223ENST00000544268 PTPAQ15257 358 aa17.16■□□□□ 0.34
CHFR-223ENST00000544268 TMED8Q6PL24 325 aaPredicted RBP17.16■□□□□ 0.34
CHFR-223ENST00000544268 FAM205AQ6ZU69 1335 aa17.16■□□□□ 0.34
CHFR-223ENST00000544268 ZNF592Q92610 1267 aa17.16■□□□□ 0.34
CHFR-223ENST00000544268 MAP3K14Q99558 947 aa17.16■□□□□ 0.34
CHFR-223ENST00000544268 EFCC1Q9HA90 598 aa17.16■□□□□ 0.34
CHFR-223ENST00000544268 BTBD18B2RXH4 712 aa17.16■□□□□ 0.34
CHFR-223ENST00000544268 ATP1A3P13637 1013 aa17.16■□□□□ 0.34
CHFR-223ENST00000544268 ST7Q9NRC1 585 aa17.16■□□□□ 0.34
CHFR-223ENST00000544268 SLC12A7Q9Y666 1083 aa17.16■□□□□ 0.34
CHFR-223ENST00000544268 CCDC69A6NI79 296 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 HSP90AA4PQ58FG1 418 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 EYA3Q99504 573 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 ATF5Q9Y2D1 282 aaPredicted RBP17.15■□□□□ 0.34
CHFR-223ENST00000544268 KIAA1551Q9HCM1 1747 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 MYH2Q9UKX2 1941 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 WDR19Q8NEZ3 1342 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 MINDY4BA8MYZ0 360 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 ATP2B1P20020 1258 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 LMOD1P29536 600 aaPredicted RBP17.15■□□□□ 0.34
CHFR-223ENST00000544268 GSTO1P78417 241 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 PPARAQ07869 468 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 NR5A1Q13285 461 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 AKNAD1Q5T1N1 836 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 TBC1D22AQ8WUA7 517 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 MRFAP1L1Q96HT8 127 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 CRNKL1Q9BZJ0 848 aaKnown RBP17.15■□□□□ 0.34
CHFR-223ENST00000544268 XPO4Q9C0E2 1151 aaKnown RBP17.15■□□□□ 0.34
CHFR-223ENST00000544268 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.15■□□□□ 0.34
CHFR-223ENST00000544268 IFNKQ9P0W0 207 aa17.15■□□□□ 0.34
CHFR-223ENST00000544268 ECM29Q5VYK3 1845 aa17.14■□□□□ 0.33
CHFR-223ENST00000544268 TIAM2Q8IVF5 1701 aa17.14■□□□□ 0.33
CHFR-223ENST00000544268 C21orf2O43822 256 aa17.14■□□□□ 0.33
CHFR-223ENST00000544268 SKILP12757 684 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms