RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 OTUD7BQ6GQQ9 843 aa23.05■■□□□ 1.28
DDX55-207ENST00000540763 SAGE1Q9NXZ1 904 aa23.05■■□□□ 1.28
DDX55-207ENST00000540763 C19orf81C9J6K1 198 aa23.04■■□□□ 1.28
DDX55-207ENST00000540763 SPP2Q13103 211 aa23.04■■□□□ 1.28
DDX55-207ENST00000540763 SEPT2Q15019 361 aa23.04■■□□□ 1.28
DDX55-207ENST00000540763 AKNAD1Q5T1N1 836 aa23.04■■□□□ 1.28
DDX55-207ENST00000540763 FASTKD5Q7L8L6 764 aaKnown RBP23.04■■□□□ 1.28
DDX55-207ENST00000540763 CCDC84Q86UT8 332 aaPredicted RBP23.04■■□□□ 1.28
DDX55-207ENST00000540763 IFNL1Q8IU54 200 aa23.04■■□□□ 1.28
DDX55-207ENST00000540763 PROCA1Q8NCQ7 364 aaPredicted RBP23.04■■□□□ 1.28
DDX55-207ENST00000540763 BRI3BPQ8WY22 251 aa23.04■■□□□ 1.28
DDX55-207ENST00000540763 LSG1Q9H089 658 aaKnown RBP23.04■■□□□ 1.28
DDX55-207ENST00000540763 NBPF3Q9H094 633 aa23.04■■□□□ 1.28
DDX55-207ENST00000540763 TRIM75PA6NK02 468 aa23.03■■□□□ 1.28
DDX55-207ENST00000540763 USP17L10C9JJH3 530 aa23.03■■□□□ 1.28
DDX55-207ENST00000540763 BACE1P56817 501 aa23.03■■□□□ 1.28
DDX55-207ENST00000540763 HAND2P61296 217 aa23.03■■□□□ 1.28
DDX55-207ENST00000540763 CFHR5Q9BXR6 569 aa23.03■■□□□ 1.28
DDX55-207ENST00000540763 KANSL2Q9H9L4 492 aa23.03■■□□□ 1.28
DDX55-207ENST00000540763 PRDM1O75626 825 aa23.02■■□□□ 1.28
DDX55-207ENST00000540763 MOGSQ13724 837 aa23.02■■□□□ 1.28
DDX55-207ENST00000540763 PPP4R3BQ5MIZ7 849 aa23.02■■□□□ 1.28
DDX55-207ENST00000540763 MFSD6Q6ZSS7 791 aa23.02■■□□□ 1.28
DDX55-207ENST00000540763 TBC1D10CQ8IV04 446 aa23.02■■□□□ 1.28
DDX55-207ENST00000540763 STK11IPQ8N1F8 1099 aa23.02■■□□□ 1.28
DDX55-207ENST00000540763 NEDD1Q8NHV4 660 aa23.02■■□□□ 1.28
DDX55-207ENST00000540763 KIAA1683Q9H0B3 1180 aa23.02■■□□□ 1.28
DDX55-207ENST00000540763 ARHGEF10LQ9HCE6 1279 aa23.02■■□□□ 1.28
DDX55-207ENST00000540763 ANO2Q9NQ90 1003 aa23.02■■□□□ 1.28
DDX55-207ENST00000540763 GTF3C3Q9Y5Q9 886 aa23.02■■□□□ 1.28
DDX55-207ENST00000540763 IGKV6D-41A0A0C4DH26 115 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 CCDC85CA6NKD9 419 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 IGF2BP3O00425 579 aaKnown RBP eCLIP23.01■■□□□ 1.27
DDX55-207ENST00000540763 TSPY3P0CV98 308 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 TSPY8P0CW00 308 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 USP14P54578 494 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 ICA1Q05084 483 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 ANKRD23Q86SG2 305 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 C12orf42Q96LP6 360 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 PTPN18Q99952 460 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.01■■□□□ 1.27
DDX55-207ENST00000540763 SH2D4AQ9H788 454 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 SYNPO2Q9UMS6 1093 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 SLC45A1Q9Y2W3 748 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 RBM8AQ9Y5S9 174 aaKnown RBP23.01■■□□□ 1.27
DDX55-207ENST00000540763 TACC3Q9Y6A5 838 aa23.01■■□□□ 1.27
DDX55-207ENST00000540763 EPB41L2O43491 1005 aaKnown RBP23■■□□□ 1.27
DDX55-207ENST00000540763 MTMR2Q13614 643 aa23■■□□□ 1.27
DDX55-207ENST00000540763 CNNM2Q9H8M5 875 aa23■■□□□ 1.27
DDX55-207ENST00000540763 TSPY2A6NKD2 308 aa22.99■■□□□ 1.27
DDX55-207ENST00000540763 BTBD19C9JJ37 291 aa22.99■■□□□ 1.27
DDX55-207ENST00000540763 REC8O95072 547 aa22.99■■□□□ 1.27
DDX55-207ENST00000540763 CYP21A2P08686 494 aa22.99■■□□□ 1.27
DDX55-207ENST00000540763 HMGCS2P54868 508 aa22.99■■□□□ 1.27
DDX55-207ENST00000540763 USP17L2Q6R6M4 530 aa22.99■■□□□ 1.27
DDX55-207ENST00000540763 FEZ1Q99689 392 aa22.99■■□□□ 1.27
DDX55-207ENST00000540763 RNF186Q9NXI6 227 aa22.99■■□□□ 1.27
DDX55-207ENST00000540763 TMOD4Q9NZQ9 345 aa22.99■■□□□ 1.27
DDX55-207ENST00000540763 NYAP2Q9P242 653 aa22.99■■□□□ 1.27
DDX55-207ENST00000540763 AGTPBP1Q9UPW5 1226 aa22.99■■□□□ 1.27
DDX55-207ENST00000540763 TFAP4Q01664 338 aa22.98■■□□□ 1.27
DDX55-207ENST00000540763 ESR2Q92731 530 aa22.98■■□□□ 1.27
DDX55-207ENST00000540763 TCP11L1Q9NUJ3 509 aa22.98■■□□□ 1.27
DDX55-207ENST00000540763 TMX2Q9Y320 296 aa22.98■■□□□ 1.27
DDX55-207ENST00000540763 NEDD4P46934 1319 aa22.98■■□□□ 1.27
DDX55-207ENST00000540763 PARP14Q460N5 1801 aa22.97■■□□□ 1.27
DDX55-207ENST00000540763 RANBP6O60518 1105 aaKnown RBP22.97■■□□□ 1.27
DDX55-207ENST00000540763 GPAT2Q6NUI2 795 aa22.97■■□□□ 1.27
DDX55-207ENST00000540763 GADL1Q6ZQY3 521 aa22.97■■□□□ 1.27
DDX55-207ENST00000540763 SIAH1Q8IUQ4 282 aa22.97■■□□□ 1.27
DDX55-207ENST00000540763 FAM43AQ8N2R8 423 aa22.97■■□□□ 1.27
DDX55-207ENST00000540763 ACER1Q8TDN7 264 aa22.97■■□□□ 1.27
DDX55-207ENST00000540763 KRT23Q9C075 422 aa22.97■■□□□ 1.27
DDX55-207ENST00000540763 TOMM22Q9NS69 142 aa22.97■■□□□ 1.27
DDX55-207ENST00000540763 MTMR4Q9NYA4 1195 aa22.97■■□□□ 1.27
DDX55-207ENST00000540763 EIF5BO60841 1220 aaKnown RBP22.96■■□□□ 1.27
DDX55-207ENST00000540763 EEF2P13639 858 aaKnown RBP22.96■■□□□ 1.27
DDX55-207ENST00000540763 NOVP48745 357 aa22.96■■□□□ 1.27
DDX55-207ENST00000540763 PABPC4Q13310 644 aaKnown RBP eCLIP22.96■■□□□ 1.27
DDX55-207ENST00000540763 NECTIN1Q15223 517 aa22.96■■□□□ 1.27
DDX55-207ENST00000540763 NOM1Q5C9Z4 860 aaKnown RBP22.96■■□□□ 1.27
DDX55-207ENST00000540763 FAM47AQ5JRC9 791 aa22.96■■□□□ 1.27
DDX55-207ENST00000540763 CEP95Q96GE4 821 aa22.96■■□□□ 1.27
DDX55-207ENST00000540763 MCOLN1Q9GZU1 580 aa22.96■■□□□ 1.27
DDX55-207ENST00000540763 INCENPQ9NQS7 918 aa22.96■■□□□ 1.27
DDX55-207ENST00000540763 A0A1W2PRG0 241 aa22.95■■□□□ 1.26
DDX55-207ENST00000540763 TTLL1O95922 423 aa22.95■■□□□ 1.26
DDX55-207ENST00000540763 RRP12Q5JTH9 1297 aaKnown RBP22.95■■□□□ 1.26
DDX55-207ENST00000540763 RNF20Q5VTR2 975 aa22.95■■□□□ 1.26
DDX55-207ENST00000540763 CLEC10AQ8IUN9 316 aa22.95■■□□□ 1.26
DDX55-207ENST00000540763 LPAR1Q92633 364 aa22.95■■□□□ 1.26
DDX55-207ENST00000540763 MKL1Q969V6 931 aa22.95■■□□□ 1.26
DDX55-207ENST00000540763 EMILIN3Q9NT22 766 aa22.95■■□□□ 1.26
DDX55-207ENST00000540763 PDHXO00330 501 aa22.94■■□□□ 1.26
DDX55-207ENST00000540763 TRPA1O75762 1119 aa22.94■■□□□ 1.26
DDX55-207ENST00000540763 HOXA7P31268 230 aaPredicted RBP22.94■■□□□ 1.26
DDX55-207ENST00000540763 TAF1CQ15572 869 aaPredicted RBP22.94■■□□□ 1.26
DDX55-207ENST00000540763 CCDC178Q5BJE1 867 aa22.94■■□□□ 1.26
DDX55-207ENST00000540763 VCPKMTQ9H867 229 aa22.94■■□□□ 1.26
DDX55-207ENST00000540763 PNMA3Q9UL41 463 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms