RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 MPHOSPH10O00566 681 aaKnown RBP19.5■□□□□ 0.71
EPB41L3-204ENST00000540638 RBM5P52756 815 aaKnown RBP eCLIP19.5■□□□□ 0.71
EPB41L3-204ENST00000540638 GTF2IP78347 998 aa19.5■□□□□ 0.71
EPB41L3-204ENST00000540638 FOXP4Q8IVH2 680 aaPredicted RBP19.5■□□□□ 0.71
EPB41L3-204ENST00000540638 SYMPKQ92797 1274 aaKnown RBP19.5■□□□□ 0.71
EPB41L3-204ENST00000540638 NUP98P52948 1817 aa19.49■□□□□ 0.71
EPB41L3-204ENST00000540638 VPS72Q15906 364 aa19.49■□□□□ 0.71
EPB41L3-204ENST00000540638 RNF26Q9BY78 433 aaPredicted RBP19.49■□□□□ 0.71
EPB41L3-204ENST00000540638 KIF5BP33176 963 aa19.49■□□□□ 0.71
EPB41L3-204ENST00000540638 MSL1Q68DK7 614 aa19.49■□□□□ 0.71
EPB41L3-204ENST00000540638 NBPF11Q86T75 865 aa19.49■□□□□ 0.71
EPB41L3-204ENST00000540638 FOXP1Q9H334 677 aaPredicted RBP19.49■□□□□ 0.71
EPB41L3-204ENST00000540638 PRDM10Q9NQV6 1147 aa19.49■□□□□ 0.71
EPB41L3-204ENST00000540638 ST5P78524 1137 aa19.49■□□□□ 0.71
EPB41L3-204ENST00000540638 ZBTB9Q96C00 473 aa19.49■□□□□ 0.71
EPB41L3-204ENST00000540638 UBR2Q8IWV8 1755 aa19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 WNT7AO00755 349 aa19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 SERPINB2P05120 415 aa19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 BTDP43251 543 aa19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 TAF1P21675 1872 aa19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 SLIT2O94813 1529 aa19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 SCNN1DP51172 638 aa19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 RBM6P78332 1123 aaKnown RBP19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 SEC23AQ15436 765 aa19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 DOK7Q18PE1 504 aa19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 BRIP1Q9BX63 1249 aa19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 LRP6O75581 1613 aa19.48■□□□□ 0.71
EPB41L3-204ENST00000540638 MARCH6O60337 910 aa19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 PLCD1P51178 756 aa19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 TMX4Q9H1E5 349 aaPredicted RBP19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 SAMSN1Q9NSI8 373 aaKnown RBP19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 GGA1Q9UJY5 639 aa19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 LAMA4Q16363 1823 aa19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 ADKP55263 362 aaKnown RBP19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 TROAPQ12815 778 aa19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 WDR66Q8TBY9 1149 aa19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 UBA5Q9GZZ9 404 aa19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 MAN1B1Q9UKM7 699 aa19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 SCG2P13521 617 aa19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 PTPREP23469 700 aa19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 SYT10Q6XYQ8 523 aa19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 RBM28Q9NW13 759 aaKnown RBP19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 FBXO2Q9UK22 296 aaPredicted RBP19.47■□□□□ 0.71
EPB41L3-204ENST00000540638 CALM1P0DP23 149 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 CALM2P0DP24 149 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 CALM3P0DP25 149 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 GSDMDP57764 484 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 CBX1P83916 185 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 CLEC10AQ8IUN9 316 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 ZSCAN29Q8IWY8 852 aaPredicted RBP19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 ZNF622Q969S3 477 aaKnown RBP eCLIP19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 ATP8A2Q9NTI2 1148 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 ARPP21Q9UBL0 812 aaPredicted RBP19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 CCT6AP40227 531 aaKnown RBP19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 GPSM2P81274 684 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 TMTC3Q6ZXV5 915 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 MYH14Q7Z406 1995 aaKnown RBP19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 GRAPQ13588 217 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 INF2Q27J81 1249 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 GRAPLQ8TC17 118 aaPredicted RBP19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 SPTLC3Q9NUV7 552 aa19.46■□□□□ 0.71
EPB41L3-204ENST00000540638 CBFA2T2O43439 604 aa19.45■□□□□ 0.7
EPB41L3-204ENST00000540638 RRAGBQ5VZM2 374 aa19.45■□□□□ 0.7
EPB41L3-204ENST00000540638 USP17L2Q6R6M4 530 aa19.45■□□□□ 0.7
EPB41L3-204ENST00000540638 MXD3Q9BW11 206 aa19.45■□□□□ 0.7
EPB41L3-204ENST00000540638 DOT1LQ8TEK3 1739 aa19.45■□□□□ 0.7
EPB41L3-204ENST00000540638 AFF2P51816 1311 aa19.45■□□□□ 0.7
EPB41L3-204ENST00000540638 LDHCP07864 332 aa19.45■□□□□ 0.7
EPB41L3-204ENST00000540638 PRR5LQ6MZQ0 368 aa19.45■□□□□ 0.7
EPB41L3-204ENST00000540638 LRRC4BQ9NT99 713 aa19.45■□□□□ 0.7
EPB41L3-204ENST00000540638 FRMPD2Q68DX3 1309 aaPredicted RBP19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 STK36Q9NRP7 1315 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 NAPAP54920 295 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 PKN1Q16512 942 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 LETM2Q2VYF4 491 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 SARM1Q6SZW1 724 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 PDCL2Q8N4E4 241 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 GJD4Q96KN9 370 aaPredicted RBP19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 PDCL3Q9H2J4 239 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 EP400Q96L91 3159 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 TXLNAP40222 546 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 DNAI1Q9UI46 699 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 COL14A1Q05707 1796 aaKnown RBP19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 XDHP47989 1333 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 FMR1Q06787 632 aaKnown RBP eCLIP19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 PPP4R3BQ5MIZ7 849 aa19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 COL1A1P02452 1464 aaPredicted RBP19.44■□□□□ 0.7
EPB41L3-204ENST00000540638 AKAP11Q9UKA4 1901 aa19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 SHANK3Q9BYB0 1731 aa19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 CNTNAP4Q9C0A0 1308 aa19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 PP2D1A8MPX8 630 aa19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 PRPF3O43395 683 aaKnown RBP19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 ERCC3P19447 782 aa19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 SOGA3Q5TF21 947 aa19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 ATRNO75882 1429 aa19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 KARSQ15046 597 aaKnown RBP19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 JAKMIP3Q5VZ66 844 aa19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 ARMCX5Q6P1M9 558 aa19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 LRRC47Q8N1G4 583 aaKnown RBP19.43■□□□□ 0.7
EPB41L3-204ENST00000540638 KIF18AQ8NI77 898 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms