RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 OSBPL5Q9H0X9 879 aaPredicted RBP13.22□□□□□ -0.29
C11orf54-214ENST00000540113 V9GY48 417 aaPredicted RBP13.22□□□□□ -0.29
C11orf54-214ENST00000540113 SEMA3EO15041 775 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 UBASH3AP57075 661 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 MDM2Q00987 491 aaPredicted RBP13.22□□□□□ -0.29
C11orf54-214ENST00000540113 PKN1Q16512 942 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 E4F1Q66K89 784 aaPredicted RBP13.22□□□□□ -0.29
C11orf54-214ENST00000540113 CTR9Q6PD62 1173 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 CSRNP2Q9H175 543 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 PDS5AQ29RF7 1337 aaKnown RBP13.22□□□□□ -0.29
C11orf54-214ENST00000540113 CCDC88AQ3V6T2 1871 aa13.21□□□□□ -0.29
C11orf54-214ENST00000540113 FAM237AA0A1B0GTK4 181 aa13.21□□□□□ -0.29
C11orf54-214ENST00000540113 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
C11orf54-214ENST00000540113 HIBADHP31937 336 aaKnown RBP13.21□□□□□ -0.29
C11orf54-214ENST00000540113 MYL5Q02045 173 aa13.21□□□□□ -0.29
C11orf54-214ENST00000540113 CFAP100Q494V2 611 aa13.21□□□□□ -0.29
C11orf54-214ENST00000540113 IFIT1BQ5T764 474 aaKnown RBP13.21□□□□□ -0.29
C11orf54-214ENST00000540113 PDCL2Q8N4E4 241 aa13.21□□□□□ -0.29
C11orf54-214ENST00000540113 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
C11orf54-214ENST00000540113 FOXP1Q9H334 677 aaPredicted RBP13.21□□□□□ -0.29
C11orf54-214ENST00000540113 PRDM10Q9NQV6 1147 aa13.21□□□□□ -0.29
C11orf54-214ENST00000540113 MAN1B1Q9UKM7 699 aa13.21□□□□□ -0.29
C11orf54-214ENST00000540113 ADAMTS3O15072 1205 aa13.21□□□□□ -0.3
C11orf54-214ENST00000540113 SFPQP23246 707 aaKnown RBP eCLIP13.21□□□□□ -0.3
C11orf54-214ENST00000540113 PTPREP23469 700 aa13.21□□□□□ -0.3
C11orf54-214ENST00000540113 PRDX5P30044 214 aa13.21□□□□□ -0.3
C11orf54-214ENST00000540113 GSDMDP57764 484 aa13.21□□□□□ -0.3
C11orf54-214ENST00000540113 CBX1P83916 185 aa13.21□□□□□ -0.3
C11orf54-214ENST00000540113 OLFM4Q6UX06 510 aa13.21□□□□□ -0.3
C11orf54-214ENST00000540113 CCDC196A0A1B0GTZ2 297 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 IKBKBO14920 756 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 FGRP09769 529 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
C11orf54-214ENST00000540113 RCAN1P53805 252 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 AKAP17AQ02040 695 aaKnown RBP13.2□□□□□ -0.3
C11orf54-214ENST00000540113 FMR1Q06787 632 aaKnown RBP eCLIP13.2□□□□□ -0.3
C11orf54-214ENST00000540113 POSTNQ15063 836 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 RILPL1Q5EBL4 403 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 MTERF4Q7Z6M4 381 aaKnown RBP13.2□□□□□ -0.3
C11orf54-214ENST00000540113 TMTC2Q8N394 836 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 EPSTI1Q96J88 318 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 CCDC94Q9BW85 323 aaPredicted RBP13.2□□□□□ -0.3
C11orf54-214ENST00000540113 IMPACTQ9P2X3 320 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 A0A087X0B3 334 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 ANKRD7Q92527 254 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
C11orf54-214ENST00000540113 PAXBP1Q9Y5B6 917 aa13.2□□□□□ -0.3
C11orf54-214ENST00000540113 AFMP43652 599 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 FUT2Q10981 343 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 NFIXQ14938 502 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 ZNF174Q15697 407 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 DHX58Q96C10 678 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 PPP1R13BQ96KQ4 1090 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 NPHP1O15259 732 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 FAM196AQ6ZSG2 479 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 CATIPQ7Z7H3 387 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 STAMQ92783 540 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 DCP1AQ9NPI6 582 aaPredicted RBP13.19□□□□□ -0.3
C11orf54-214ENST00000540113 LRRC4BQ9NT99 713 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 INTS13Q9NVM9 706 aa13.19□□□□□ -0.3
C11orf54-214ENST00000540113 ZNF215Q9UL58 517 aaPredicted RBP13.19□□□□□ -0.3
C11orf54-214ENST00000540113 UBR3Q6ZT12 1888 aa13.18□□□□□ -0.3
C11orf54-214ENST00000540113 COBLO75128 1261 aa13.18□□□□□ -0.3
C11orf54-214ENST00000540113 CCDC150Q8NCX0 1101 aa13.18□□□□□ -0.3
C11orf54-214ENST00000540113 MED15Q96RN5 788 aa13.18□□□□□ -0.3
C11orf54-214ENST00000540113 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
C11orf54-214ENST00000540113 SRPRBQ9Y5M8 271 aaKnown RBP13.18□□□□□ -0.3
C11orf54-214ENST00000540113 ACTN4O43707 911 aaKnown RBP13.18□□□□□ -0.3
C11orf54-214ENST00000540113 RFC4P35249 363 aa13.18□□□□□ -0.3
C11orf54-214ENST00000540113 TROAPQ12815 778 aa13.18□□□□□ -0.3
C11orf54-214ENST00000540113 SYT10Q6XYQ8 523 aa13.18□□□□□ -0.3
C11orf54-214ENST00000540113 SRBD1Q8N5C6 995 aaKnown RBP13.18□□□□□ -0.3
C11orf54-214ENST00000540113 GPR101Q96P66 508 aaPredicted RBP13.18□□□□□ -0.3
C11orf54-214ENST00000540113 PHF20Q9BVI0 1012 aa13.18□□□□□ -0.3
C11orf54-214ENST00000540113 MTMR7Q9Y216 660 aa13.18□□□□□ -0.3
C11orf54-214ENST00000540113 KRT2P35908 639 aa13.17□□□□□ -0.3
C11orf54-214ENST00000540113 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
C11orf54-214ENST00000540113 IQCA1Q86XH1 822 aa13.17□□□□□ -0.3
C11orf54-214ENST00000540113 LRRN4CLQ8ND94 238 aa13.17□□□□□ -0.3
C11orf54-214ENST00000540113 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
C11orf54-214ENST00000540113 SAMSN1Q9NSI8 373 aaKnown RBP13.17□□□□□ -0.3
C11orf54-214ENST00000540113 NFE2L3Q9Y4A8 694 aa13.17□□□□□ -0.3
C11orf54-214ENST00000540113 TRIM75PA6NK02 468 aa13.17□□□□□ -0.3
C11orf54-214ENST00000540113 USP17L8P0C7I0 530 aa13.17□□□□□ -0.3
C11orf54-214ENST00000540113 STX17P56962 302 aa13.17□□□□□ -0.3
C11orf54-214ENST00000540113 ZNF772Q68DY9 489 aaPredicted RBP13.17□□□□□ -0.3
C11orf54-214ENST00000540113 KLHL10Q6JEL2 608 aa13.17□□□□□ -0.3
C11orf54-214ENST00000540113 SMYD4Q8IYR2 804 aaPredicted RBP13.17□□□□□ -0.3
C11orf54-214ENST00000540113 CRNKL1Q9BZJ0 848 aaKnown RBP13.17□□□□□ -0.3
C11orf54-214ENST00000540113 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
C11orf54-214ENST00000540113 ORC4O43929 436 aa13.16□□□□□ -0.3
C11orf54-214ENST00000540113 TOP1P11387 765 aaKnown RBP13.16□□□□□ -0.3
C11orf54-214ENST00000540113 CDK11BP21127 795 aaKnown RBP13.16□□□□□ -0.3
C11orf54-214ENST00000540113 GRAPQ13588 217 aa13.16□□□□□ -0.3
C11orf54-214ENST00000540113 GRIK5Q16478 980 aa13.16□□□□□ -0.3
C11orf54-214ENST00000540113 KRT27Q7Z3Y8 459 aa13.16□□□□□ -0.3
C11orf54-214ENST00000540113 VSTM4Q8IW00 320 aa13.16□□□□□ -0.3
C11orf54-214ENST00000540113 GRAPLQ8TC17 118 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms