RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 APOBRQ0VD83 1088 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 LONRF2Q1L5Z9 754 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 TTC31Q49AM3 519 aaPredicted RBP6.6□□□□□ -1.35
CHD4-206ENST00000536999 TPRNQ4KMQ1 711 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 TRIM65Q6PJ69 517 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 SRLQ86TD4 932 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 TAX1BP1Q86VP1 789 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 CCDC50Q8IVM0 306 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 RETREG2Q8NC44 543 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 NOC3LQ8WTT2 800 aaKnown RBP6.6□□□□□ -1.35
CHD4-206ENST00000536999 L3MBTL3Q96JM7 780 aaPredicted RBP6.6□□□□□ -1.35
CHD4-206ENST00000536999 GSDMAQ96QA5 445 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 CEP89Q96ST8 783 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 NUP58Q9BVL2 599 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 CARD6Q9BX69 1037 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 PARD6BQ9BYG5 372 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 TSGA10Q9BZW7 698 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 CCDC8Q9H0W5 538 aaPredicted RBP6.6□□□□□ -1.35
CHD4-206ENST00000536999 IL25Q9H293 177 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 FOXP1Q9H334 677 aaPredicted RBP6.6□□□□□ -1.35
CHD4-206ENST00000536999 BICC1Q9H694 974 aaKnown RBP6.6□□□□□ -1.35
CHD4-206ENST00000536999 ZNF446Q9NWS9 450 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 RNF14Q9UBS8 474 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 NAP1L2Q9ULW6 460 aaPredicted RBP6.6□□□□□ -1.35
CHD4-206ENST00000536999 HPSEQ9Y251 543 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 TCHHQ07283 1943 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 ATXN2Q99700 1313 aaKnown RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 A0A087WUV0 522 aaPredicted RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 SHTN1A0MZ66 631 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 SRRM3A6NNA2 597 aaPredicted RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 FAM177BA6PVY3 158 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 MYO1CO00159 1063 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 JAK2O60674 1132 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 IGSF3O75054 1194 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 PPFIA4O75335 1185 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 TBC1D8O95759 1140 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 HSPD1P10809 573 aaKnown RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 PCP11498 1178 aaKnown RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 CPA1P15085 419 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 PFKFB1P16118 471 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 LIFRP42702 1097 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 LMAN1P49257 510 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 AARSP49588 968 aaKnown RBP eCLIP6.59□□□□□ -1.35
CHD4-206ENST00000536999 GTF2A1P52655 376 aaPredicted RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 LMNB2Q03252 620 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 TBX2Q13207 712 aaPredicted RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 NCAPHQ15003 741 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 SPATA1Q5VX52 437 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 RESP18Q5W5W9 173 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 ICE2Q659A1 982 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 TTLL5Q6EMB2 1281 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 CIAPIN1Q6FI81 312 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 CYP26C1Q6V0L0 522 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 C2CD5Q86YS7 1000 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 SUGP1Q8IWZ8 645 aaKnown RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 REXO1L1PQ8IX06 675 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 TTC5Q8N0Z6 440 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 CCDC155Q8N6L0 562 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 USHBP1Q8N6Y0 703 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 CCDC12Q8WUD4 166 aaPredicted RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 NECTIN2Q92692 538 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 CCDC47Q96A33 483 aaKnown RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 FERMT2Q96AC1 680 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 ZNF512BQ96KM6 892 aaPredicted RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 NAPGQ99747 312 aaPredicted RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 CRACR2AQ9BSW2 395 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 FUT8Q9BYC5 575 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 KRT23Q9C075 422 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 TAOK3Q9H2K8 898 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 HAUS4Q9H6D7 363 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 LUC7LQ9NQ29 371 aaKnown RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 TMOD3Q9NYL9 352 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 RAI14Q9P0K7 980 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 CEP126Q9P2H0 1117 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 KCNH3Q9ULD8 1083 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 ANGEL1Q9UNK9 670 aaKnown RBP6.59□□□□□ -1.35
CHD4-206ENST00000536999 CCDC88AQ3V6T2 1871 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 SPEF2Q9C093 1822 aa6.59□□□□□ -1.35
CHD4-206ENST00000536999 A0A0C4DFX4 3053 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 ZMYM6O95789 1325 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 TRIOBPQ9H2D6 2365 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 A0A1B0GVL5 298 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 ANO9A1A5B4 782 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 ERICH2A1L162 156 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 USP27XA6NNY8 438 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 H0YIN7 160 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 POLRMTO00411 1230 aaKnown RBP6.58□□□□□ -1.36
CHD4-206ENST00000536999 EBAG9O00559 213 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 POLR3GO15318 223 aaPredicted RBP6.58□□□□□ -1.36
CHD4-206ENST00000536999 IFIT1P09914 478 aaKnown RBP6.58□□□□□ -1.36
CHD4-206ENST00000536999 GNAT2P19087 354 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 LMOD1P29536 600 aaPredicted RBP6.58□□□□□ -1.36
CHD4-206ENST00000536999 IARSP41252 1262 aaKnown RBP6.58□□□□□ -1.36
CHD4-206ENST00000536999 ARHGAP25P42331 645 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 PLCD1P51178 756 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 CDR1P51861 262 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 CEBPZQ03701 1054 aaKnown RBP6.58□□□□□ -1.36
CHD4-206ENST00000536999 ITIH3Q06033 890 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 PPFIA1Q13136 1202 aa6.58□□□□□ -1.36
CHD4-206ENST00000536999 STIM1Q13586 685 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms