RNA–Protein interactions for RNA: ENST00000531660.5

NR1H3-233, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-233ENST00000531660 TDO2P48775 406 aa20.18■□□□□ 0.82
NR1H3-233ENST00000531660 PRMT2P55345 433 aa20.18■□□□□ 0.82
NR1H3-233ENST00000531660 ROBO3Q96MS0 1386 aa20.18■□□□□ 0.82
NR1H3-233ENST00000531660 CCDC85CA6NKD9 419 aa20.17■□□□□ 0.82
NR1H3-233ENST00000531660 SEPT2Q15019 361 aa20.17■□□□□ 0.82
NR1H3-233ENST00000531660 IFNL3Q8IZI9 196 aa20.17■□□□□ 0.82
NR1H3-233ENST00000531660 ASCC2Q9H1I8 757 aaPredicted RBP20.17■□□□□ 0.82
NR1H3-233ENST00000531660 ZNF287Q9HBT7 754 aa20.17■□□□□ 0.82
NR1H3-233ENST00000531660 EPB41L4AQ9HCS5 686 aaPredicted RBP20.17■□□□□ 0.82
NR1H3-233ENST00000531660 EMILIN3Q9NT22 766 aa20.17■□□□□ 0.82
NR1H3-233ENST00000531660 HOXD10P28358 340 aa20.16■□□□□ 0.82
NR1H3-233ENST00000531660 IRX3P78415 501 aaPredicted RBP20.16■□□□□ 0.82
NR1H3-233ENST00000531660 CAP1Q01518 475 aa20.16■□□□□ 0.82
NR1H3-233ENST00000531660 FAM110CQ1W6H9 321 aa20.16■□□□□ 0.82
NR1H3-233ENST00000531660 MINDY4BA8MYZ0 360 aa20.15■□□□□ 0.82
NR1H3-233ENST00000531660 AKR1B1P15121 316 aa20.15■□□□□ 0.82
NR1H3-233ENST00000531660 PSMC4P43686 418 aa20.15■□□□□ 0.82
NR1H3-233ENST00000531660 MCMDC2Q4G0Z9 681 aa20.15■□□□□ 0.82
NR1H3-233ENST00000531660 ACER1Q8TDN7 264 aa20.15■□□□□ 0.82
NR1H3-233ENST00000531660 GTF3C2Q8WUA4 911 aaPredicted RBP20.15■□□□□ 0.82
NR1H3-233ENST00000531660 RILPL2Q969X0 211 aa20.15■□□□□ 0.82
NR1H3-233ENST00000531660 NAPBQ9H115 298 aa20.15■□□□□ 0.82
NR1H3-233ENST00000531660 SMIM22K7EJ46 135 aa20.14■□□□□ 0.81
NR1H3-233ENST00000531660 FCGRTP55899 365 aa20.14■□□□□ 0.81
NR1H3-233ENST00000531660 ARHGAP39Q9C0H5 1083 aa20.14■□□□□ 0.81
NR1H3-233ENST00000531660 SH2D4AQ9H788 454 aa20.14■□□□□ 0.81
NR1H3-233ENST00000531660 KANSL2Q9H9L4 492 aa20.14■□□□□ 0.81
NR1H3-233ENST00000531660 MKNK2Q9HBH9 465 aa20.14■□□□□ 0.81
NR1H3-233ENST00000531660 ARHGEF10LQ9HCE6 1279 aa20.14■□□□□ 0.81
NR1H3-233ENST00000531660 USP17L15C9J2P7 530 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 USP17L13C9JLJ4 530 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 USP17L11C9JVI0 530 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 USP17L18D6R9N7 530 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 USP17L22D6RA61 530 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 USP17L17D6RBQ6 530 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 USP17L19D6RCP7 530 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 USP17L20D6RJB6 530 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 HIP1O00291 1037 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 FMNL1O95466 1100 aaPredicted RBP20.13■□□□□ 0.81
NR1H3-233ENST00000531660 SLC3A2P08195 630 aaKnown RBP20.13■□□□□ 0.81
NR1H3-233ENST00000531660 USP17L24Q0WX57 530 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 TRIM47Q96LD4 638 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 MGAMO43451 1857 aa20.13■□□□□ 0.81
NR1H3-233ENST00000531660 HTTP42858 3142 aa20.12■□□□□ 0.81
NR1H3-233ENST00000531660 SDSP20132 328 aa20.12■□□□□ 0.81
NR1H3-233ENST00000531660 RASA1P20936 1047 aa20.12■□□□□ 0.81
NR1H3-233ENST00000531660 MFAP1P55081 439 aaKnown RBP20.12■□□□□ 0.81
NR1H3-233ENST00000531660 ICA1Q05084 483 aa20.12■□□□□ 0.81
NR1H3-233ENST00000531660 ALX1Q15699 326 aa20.12■□□□□ 0.81
NR1H3-233ENST00000531660 ZYXQ15942 572 aaKnown RBP20.12■□□□□ 0.81
NR1H3-233ENST00000531660 CCDC129Q6ZRS4 1044 aa20.12■□□□□ 0.81
NR1H3-233ENST00000531660 ANKRD13CQ8N6S4 541 aa20.12■□□□□ 0.81
NR1H3-233ENST00000531660 FAM227BQ96M60 508 aa20.12■□□□□ 0.81
NR1H3-233ENST00000531660 P2RX7Q99572 595 aaKnown RBP20.12■□□□□ 0.81
NR1H3-233ENST00000531660 MORF4L1Q9UBU8 362 aa20.12■□□□□ 0.81
NR1H3-233ENST00000531660 SRRDQ9UH36 339 aa20.12■□□□□ 0.81
NR1H3-233ENST00000531660 TMX2Q9Y320 296 aa20.12■□□□□ 0.81
NR1H3-233ENST00000531660 A0A0D9SFI3 127 aa20.11■□□□□ 0.81
NR1H3-233ENST00000531660 A0A1W2PRG0 241 aa20.11■□□□□ 0.81
NR1H3-233ENST00000531660 VCAM1P19320 739 aa20.11■□□□□ 0.81
NR1H3-233ENST00000531660 PDE4AP27815 886 aa20.11■□□□□ 0.81
NR1H3-233ENST00000531660 CTGFP29279 349 aa20.11■□□□□ 0.81
NR1H3-233ENST00000531660 HERVK_113P62684 666 aa20.11■□□□□ 0.81
NR1H3-233ENST00000531660 PDE4BQ07343 736 aa20.11■□□□□ 0.81
NR1H3-233ENST00000531660 NMIQ13287 307 aaPredicted RBP20.11■□□□□ 0.81
NR1H3-233ENST00000531660 LPAR1Q92633 364 aa20.11■□□□□ 0.81
NR1H3-233ENST00000531660 KIAA0100Q14667 2235 aaKnown RBP20.11■□□□□ 0.81
NR1H3-233ENST00000531660 ZSWIM8A7E2V4 1837 aa20.11■□□□□ 0.81
NR1H3-233ENST00000531660 GREB1LQ9C091 1923 aaPredicted RBP20.1■□□□□ 0.81
NR1H3-233ENST00000531660 FOXP2O15409 715 aa20.1■□□□□ 0.81
NR1H3-233ENST00000531660 PPARAQ07869 468 aa20.1■□□□□ 0.81
NR1H3-233ENST00000531660 CATSPERGQ6ZRH7 1159 aa20.1■□□□□ 0.81
NR1H3-233ENST00000531660 SIAH1Q8IUQ4 282 aa20.1■□□□□ 0.81
NR1H3-233ENST00000531660 ZNF444Q8N0Y2 327 aaPredicted RBP20.1■□□□□ 0.81
NR1H3-233ENST00000531660 ARMC5Q96C12 935 aa20.1■□□□□ 0.81
NR1H3-233ENST00000531660 PTCH2Q9Y6C5 1203 aa20.1■□□□□ 0.81
NR1H3-233ENST00000531660 DOCK3Q8IZD9 2030 aa20.1■□□□□ 0.81
NR1H3-233ENST00000531660 CCDC171Q6TFL3 1326 aa20.09■□□□□ 0.81
NR1H3-233ENST00000531660 NBPF11Q86T75 865 aa20.09■□□□□ 0.81
NR1H3-233ENST00000531660 DIAPH3Q9NSV4 1193 aa20.09■□□□□ 0.81
NR1H3-233ENST00000531660 ZMYM6O95789 1325 aa20.08■□□□□ 0.81
NR1H3-233ENST00000531660 TNPO2O14787 897 aaKnown RBP20.08■□□□□ 0.81
NR1H3-233ENST00000531660 EEF2P13639 858 aaKnown RBP20.08■□□□□ 0.81
NR1H3-233ENST00000531660 RGS19P49795 217 aa20.08■□□□□ 0.81
NR1H3-233ENST00000531660 TTC22Q5TAA0 569 aa20.08■□□□□ 0.81
NR1H3-233ENST00000531660 VPS53Q5VIR6 699 aa20.08■□□□□ 0.81
NR1H3-233ENST00000531660 LBX2Q6XYB7 198 aa20.08■□□□□ 0.81
NR1H3-233ENST00000531660 GPRC5AQ8NFJ5 357 aa20.08■□□□□ 0.81
NR1H3-233ENST00000531660 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.08■□□□□ 0.81
NR1H3-233ENST00000531660 RPAP3Q9H6T3 665 aaPredicted RBP20.08■□□□□ 0.81
NR1H3-233ENST00000531660 VCPKMTQ9H867 229 aa20.08■□□□□ 0.81
NR1H3-233ENST00000531660 NYAP2Q9P242 653 aa20.08■□□□□ 0.81
NR1H3-233ENST00000531660 ANAPC4Q9UJX5 808 aa20.08■□□□□ 0.81
NR1H3-233ENST00000531660 MYPNQ86TC9 1320 aa20.07■□□□□ 0.8
NR1H3-233ENST00000531660 HSPD1P10809 573 aaKnown RBP20.07■□□□□ 0.8
NR1H3-233ENST00000531660 SLC9C1Q4G0N8 1177 aa20.07■□□□□ 0.8
NR1H3-233ENST00000531660 STK11IPQ8N1F8 1099 aa20.07■□□□□ 0.8
NR1H3-233ENST00000531660 COA7Q96BR5 231 aa20.07■□□□□ 0.8
NR1H3-233ENST00000531660 RBPJLQ9UBG7 517 aa20.07■□□□□ 0.8
NR1H3-233ENST00000531660 RABGAP1Q9Y3P9 1069 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms