RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 RABGAP1Q9Y3P9 1069 aa13.02□□□□□ -0.33
VPS26B-203ENST00000525918 LAMA3Q16787 3333 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 USP17L15C9J2P7 530 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 USP17L13C9JLJ4 530 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 USP17L11C9JVI0 530 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 USP17L18D6R9N7 530 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 USP17L22D6RA61 530 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 USP17L17D6RBQ6 530 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 USP17L19D6RCP7 530 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 USP17L20D6RJB6 530 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 SOX1O00570 391 aaPredicted RBP13.01□□□□□ -0.33
VPS26B-203ENST00000525918 GLRX3O76003 335 aaKnown RBP13.01□□□□□ -0.33
VPS26B-203ENST00000525918 CCNA1P78396 465 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 USP17L24Q0WX57 530 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 RAB3GAP1Q15042 981 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 CERKLQ49MI3 558 aaPredicted RBP13.01□□□□□ -0.33
VPS26B-203ENST00000525918 POTEEQ6S8J3 1075 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 LRCH3Q96II8 777 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 FEZ1Q99689 392 aa13.01□□□□□ -0.33
VPS26B-203ENST00000525918 CWC22Q9HCG8 908 aaKnown RBP13.01□□□□□ -0.33
VPS26B-203ENST00000525918 ZMYND8Q9ULU4 1186 aaPredicted RBP13.01□□□□□ -0.33
VPS26B-203ENST00000525918 NAV1Q8NEY1 1877 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 ZYXQ15942 572 aaKnown RBP13□□□□□ -0.33
VPS26B-203ENST00000525918 CCL14Q16627 93 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 ABCB5Q2M3G0 1257 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 LHX8Q68G74 356 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 GPR153Q6NV75 609 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 CATSPERGQ6ZRH7 1159 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 ERC1Q8IUD2 1116 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 EDC3Q96F86 508 aaKnown RBP13□□□□□ -0.33
VPS26B-203ENST00000525918 APBA2Q99767 749 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 KIAA1683Q9H0B3 1180 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 ANTXR1Q9H6X2 564 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 CABP5Q9NP86 173 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 NDUFB9Q9Y6M9 179 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 MYH8P13535 1937 aa13□□□□□ -0.33
VPS26B-203ENST00000525918 PFASO15067 1338 aa12.99□□□□□ -0.33
VPS26B-203ENST00000525918 CNMDO75829 334 aa12.99□□□□□ -0.33
VPS26B-203ENST00000525918 COL6A1P12109 1028 aa12.99□□□□□ -0.33
VPS26B-203ENST00000525918 RLBP1P12271 317 aa12.99□□□□□ -0.33
VPS26B-203ENST00000525918 SYN1P17600 705 aa12.99□□□□□ -0.33
VPS26B-203ENST00000525918 CCND3P30281 292 aaPredicted RBP12.99□□□□□ -0.33
VPS26B-203ENST00000525918 MAP2K5Q13163 448 aa12.99□□□□□ -0.33
VPS26B-203ENST00000525918 CEP85Q6P2H3 762 aa12.99□□□□□ -0.33
VPS26B-203ENST00000525918 LBX2Q6XYB7 198 aa12.99□□□□□ -0.33
VPS26B-203ENST00000525918 SLC15A5A6NIM6 579 aa12.98□□□□□ -0.33
VPS26B-203ENST00000525918 POLR3DP05423 398 aaPredicted RBP12.98□□□□□ -0.33
VPS26B-203ENST00000525918 VCAM1P19320 739 aa12.98□□□□□ -0.33
VPS26B-203ENST00000525918 MAGEA10P43363 369 aaPredicted RBP12.98□□□□□ -0.33
VPS26B-203ENST00000525918 PLCD1P51178 756 aa12.98□□□□□ -0.33
VPS26B-203ENST00000525918 TTF1Q15361 905 aaPredicted RBP12.98□□□□□ -0.33
VPS26B-203ENST00000525918 LRIT3Q3SXY7 679 aa12.98□□□□□ -0.33
VPS26B-203ENST00000525918 HSP90AB4PQ58FF6 505 aa12.98□□□□□ -0.33
VPS26B-203ENST00000525918 WDR78Q5VTH9 848 aa12.98□□□□□ -0.33
VPS26B-203ENST00000525918 AACSQ86V21 672 aa12.98□□□□□ -0.33
VPS26B-203ENST00000525918 SLC17A8Q8NDX2 589 aa12.98□□□□□ -0.33
VPS26B-203ENST00000525918 RIOK1Q9BRS2 568 aaKnown RBP12.98□□□□□ -0.33
VPS26B-203ENST00000525918 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
VPS26B-203ENST00000525918 COL6A3P12111 3177 aa12.97□□□□□ -0.33
VPS26B-203ENST00000525918 MAGEB6P1A0A0J9YX57 407 aa12.97□□□□□ -0.33
VPS26B-203ENST00000525918 HOXC6P09630 235 aa12.97□□□□□ -0.33
VPS26B-203ENST00000525918 PTPREP23469 700 aa12.97□□□□□ -0.33
VPS26B-203ENST00000525918 SHMT1P34896 483 aa12.97□□□□□ -0.33
VPS26B-203ENST00000525918 HNRNPUQ00839 825 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS26B-203ENST00000525918 MFSD14CQ5VZR4 134 aa12.97□□□□□ -0.33
VPS26B-203ENST00000525918 TDHQ8IZJ6 230 aa12.97□□□□□ -0.33
VPS26B-203ENST00000525918 ACER1Q8TDN7 264 aa12.97□□□□□ -0.33
VPS26B-203ENST00000525918 RPAP3Q9H6T3 665 aaPredicted RBP12.97□□□□□ -0.33
VPS26B-203ENST00000525918 BTBD7Q9P203 1132 aa12.97□□□□□ -0.33
VPS26B-203ENST00000525918 IVNS1ABPQ9Y6Y0 642 aa12.97□□□□□ -0.33
VPS26B-203ENST00000525918 MSCO60682 206 aa12.96□□□□□ -0.33
VPS26B-203ENST00000525918 DSG3P32926 999 aa12.96□□□□□ -0.33
VPS26B-203ENST00000525918 ATP2B2Q01814 1243 aa12.96□□□□□ -0.33
VPS26B-203ENST00000525918 GABPAQ06546 454 aa12.96□□□□□ -0.33
VPS26B-203ENST00000525918 SLC9C2Q5TAH2 1124 aa12.96□□□□□ -0.33
VPS26B-203ENST00000525918 RHPN1Q8TCX5 695 aa12.96□□□□□ -0.33
VPS26B-203ENST00000525918 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
VPS26B-203ENST00000525918 UBE2OQ9C0C9 1292 aaKnown RBP12.96□□□□□ -0.33
VPS26B-203ENST00000525918 FLRT1Q9NZU1 646 aa12.96□□□□□ -0.33
VPS26B-203ENST00000525918 RLFQ13129 1914 aa12.96□□□□□ -0.34
VPS26B-203ENST00000525918 ZNFX1Q9P2E3 1918 aaKnown RBP12.96□□□□□ -0.34
VPS26B-203ENST00000525918 SPDYE16A6NNV3 312 aaPredicted RBP12.95□□□□□ -0.34
VPS26B-203ENST00000525918 PDE6AP16499 860 aa12.95□□□□□ -0.34
VPS26B-203ENST00000525918 GUCY1A2P33402 732 aa12.95□□□□□ -0.34
VPS26B-203ENST00000525918 GRB14Q14449 540 aa12.95□□□□□ -0.34
VPS26B-203ENST00000525918 COG2Q14746 738 aa12.95□□□□□ -0.34
VPS26B-203ENST00000525918 SEPT2Q15019 361 aa12.95□□□□□ -0.34
VPS26B-203ENST00000525918 LRRC26Q2I0M4 334 aa12.95□□□□□ -0.34
VPS26B-203ENST00000525918 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
VPS26B-203ENST00000525918 MCM9Q9NXL9 1143 aa12.95□□□□□ -0.34
VPS26B-203ENST00000525918 HOXC10Q9NYD6 342 aa12.95□□□□□ -0.34
VPS26B-203ENST00000525918 DNAH12Q6ZR08 3092 aa12.95□□□□□ -0.34
VPS26B-203ENST00000525918 ZNF236Q9UL36 1845 aa12.95□□□□□ -0.34
VPS26B-203ENST00000525918 BAZ2AQ9UIF9 1905 aaKnown RBP12.94□□□□□ -0.34
VPS26B-203ENST00000525918 MPHOSPH10O00566 681 aaKnown RBP12.94□□□□□ -0.34
VPS26B-203ENST00000525918 STRNO43815 780 aa12.94□□□□□ -0.34
VPS26B-203ENST00000525918 CNGA1P29973 690 aa12.94□□□□□ -0.34
VPS26B-203ENST00000525918 CLASRPQ8N2M8 674 aaKnown RBP12.94□□□□□ -0.34
VPS26B-203ENST00000525918 DEFB123Q8N688 67 aa12.94□□□□□ -0.34
VPS26B-203ENST00000525918 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms