RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 CCDC86Q9H6F5 360 aaKnown RBP7.45□□□□□ -1.22
SVIP-202ENST00000525670 C1GALT1Q9NS00 363 aa7.45□□□□□ -1.22
SVIP-202ENST00000525670 BSDC1Q9NW68 430 aaPredicted RBP7.45□□□□□ -1.22
SVIP-202ENST00000525670 METP08581 1390 aa7.45□□□□□ -1.22
SVIP-202ENST00000525670 ALKQ9UM73 1620 aa7.45□□□□□ -1.22
SVIP-202ENST00000525670 XRN1Q8IZH2 1706 aaKnown RBP7.44□□□□□ -1.22
SVIP-202ENST00000525670 FCGRTP55899 365 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 HNRNPUQ00839 825 aaKnown RBP eCLIP7.44□□□□□ -1.22
SVIP-202ENST00000525670 PLCB3Q01970 1234 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 DSC3Q14574 896 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 OGFOD3Q6PK18 319 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 ZNF765Q7L2R6 523 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.44□□□□□ -1.22
SVIP-202ENST00000525670 WDR89Q96FK6 387 aaPredicted RBP7.44□□□□□ -1.22
SVIP-202ENST00000525670 FMNL2Q96PY5 1086 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 BCO2Q9BYV7 579 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 KRT82Q9NSB4 513 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 TMEM39AQ9NV64 488 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 CRIM1Q9NZV1 1036 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 ADGRE2Q9UHX3 823 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 DAGLAQ9Y4D2 1042 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 TMEM94Q12767 1356 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 NALCNQ8IZF0 1738 aa7.44□□□□□ -1.22
SVIP-202ENST00000525670 TMPRSS2O15393 492 aa7.43□□□□□ -1.22
SVIP-202ENST00000525670 ZNF862O60290 1169 aa7.43□□□□□ -1.22
SVIP-202ENST00000525670 GSTP1P09211 210 aaKnown RBP7.43□□□□□ -1.22
SVIP-202ENST00000525670 KCNA6P17658 529 aa7.43□□□□□ -1.22
SVIP-202ENST00000525670 TXKP42681 527 aa7.43□□□□□ -1.22
SVIP-202ENST00000525670 PI16Q6UXB8 463 aa7.43□□□□□ -1.22
SVIP-202ENST00000525670 VSIG10LQ86VR7 867 aa7.43□□□□□ -1.22
SVIP-202ENST00000525670 FBXL18Q96ME1 805 aa7.43□□□□□ -1.22
SVIP-202ENST00000525670 ZC3H12CQ9C0D7 883 aaKnown RBP7.43□□□□□ -1.22
SVIP-202ENST00000525670 ATXN3LQ9H3M9 355 aa7.43□□□□□ -1.22
SVIP-202ENST00000525670 STK26Q9P289 416 aa7.43□□□□□ -1.22
SVIP-202ENST00000525670 NKTRP30414 1462 aaKnown RBP7.43□□□□□ -1.22
SVIP-202ENST00000525670 DYNC1LI2O43237 492 aaPredicted RBP7.42□□□□□ -1.22
SVIP-202ENST00000525670 TREHO43280 583 aa7.42□□□□□ -1.22
SVIP-202ENST00000525670 ID3Q02535 119 aa7.42□□□□□ -1.22
SVIP-202ENST00000525670 KIF4BQ2VIQ3 1234 aa7.42□□□□□ -1.22
SVIP-202ENST00000525670 TMEM132EQ6IEE7 984 aa7.42□□□□□ -1.22
SVIP-202ENST00000525670 ABI1Q8IZP0 508 aa7.42□□□□□ -1.22
SVIP-202ENST00000525670 LGR6Q9HBX8 967 aa7.42□□□□□ -1.22
SVIP-202ENST00000525670 LRRC4CQ9HCJ2 640 aa7.42□□□□□ -1.22
SVIP-202ENST00000525670 GPN3Q9UHW5 284 aaPredicted RBP7.42□□□□□ -1.22
SVIP-202ENST00000525670 PIK3C2GO75747 1445 aa7.42□□□□□ -1.22
SVIP-202ENST00000525670 PNMA6FA0A0J9YX94 578 aa7.41□□□□□ -1.22
SVIP-202ENST00000525670 MAPK1P28482 360 aa7.41□□□□□ -1.22
SVIP-202ENST00000525670 SAFB2Q14151 953 aaKnown RBP eCLIP7.41□□□□□ -1.22
SVIP-202ENST00000525670 ENOX2Q16206 610 aaKnown RBP7.41□□□□□ -1.22
SVIP-202ENST00000525670 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.41□□□□□ -1.22
SVIP-202ENST00000525670 NFXL1Q6ZNB6 911 aa7.41□□□□□ -1.22
SVIP-202ENST00000525670 PDZD3Q86UT5 571 aa7.41□□□□□ -1.22
SVIP-202ENST00000525670 FANCD2OSQ96PS1 177 aa7.41□□□□□ -1.22
SVIP-202ENST00000525670 PIDD1Q9HB75 910 aa7.41□□□□□ -1.22
SVIP-202ENST00000525670 GOLGA2P5Q9HBQ8 144 aa7.41□□□□□ -1.22
SVIP-202ENST00000525670 DISC1Q9NRI5 854 aa7.41□□□□□ -1.22
SVIP-202ENST00000525670 ZC3H7BQ9UGR2 993 aaKnown RBP7.41□□□□□ -1.22
SVIP-202ENST00000525670 MYOM2P54296 1465 aa7.41□□□□□ -1.22
SVIP-202ENST00000525670 CYP27C1Q4G0S4 372 aa7.4□□□□□ -1.22
SVIP-202ENST00000525670 NXPE4Q6UWF7 544 aa7.4□□□□□ -1.22
SVIP-202ENST00000525670 TP53INP2Q8IXH6 220 aa7.4□□□□□ -1.22
SVIP-202ENST00000525670 FBXO41Q8TF61 875 aa7.4□□□□□ -1.22
SVIP-202ENST00000525670 AKAP2Q9Y2D5 859 aa7.4□□□□□ -1.22
SVIP-202ENST00000525670 PCDHGC5Q9Y5F6 944 aa7.4□□□□□ -1.22
SVIP-202ENST00000525670 LAMC1P11047 1609 aa7.4□□□□□ -1.22
SVIP-202ENST00000525670 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.4□□□□□ -1.23
SVIP-202ENST00000525670 ROBO1Q9Y6N7 1651 aa7.39□□□□□ -1.23
SVIP-202ENST00000525670 ROBO2Q9HCK4 1378 aa7.39□□□□□ -1.23
SVIP-202ENST00000525670 PLEKHH1Q9ULM0 1364 aa7.39□□□□□ -1.23
SVIP-202ENST00000525670 ARNTP27540 789 aa7.39□□□□□ -1.23
SVIP-202ENST00000525670 SULF2Q8IWU5 870 aa7.39□□□□□ -1.23
SVIP-202ENST00000525670 SMYD4Q8IYR2 804 aaPredicted RBP7.39□□□□□ -1.23
SVIP-202ENST00000525670 KCNB2Q92953 911 aa7.39□□□□□ -1.23
SVIP-202ENST00000525670 KNDC1Q76NI1 1749 aa7.38□□□□□ -1.23
SVIP-202ENST00000525670 MSH6P52701 1360 aa7.38□□□□□ -1.23
SVIP-202ENST00000525670 RPGRIP1LQ68CZ1 1315 aa7.38□□□□□ -1.23
SVIP-202ENST00000525670 KRTAP1-3Q8IUG1 177 aa7.38□□□□□ -1.23
SVIP-202ENST00000525670 EMILIN2Q9BXX0 1053 aa7.38□□□□□ -1.23
SVIP-202ENST00000525670 TBX22Q9Y458 520 aa7.38□□□□□ -1.23
SVIP-202ENST00000525670 RNF114Q9Y508 228 aa7.38□□□□□ -1.23
SVIP-202ENST00000525670 IQSEC2Q5JU85 1478 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 NRXN1Q9ULB1 1477 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 NME2P22392 152 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 TTLL4Q14679 1199 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 LCE3BQ5TA77 95 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 CBLL1Q75N03 491 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 WAPLQ7Z5K2 1190 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 AGBL5Q8NDL9 886 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 STK35Q8TDR2 534 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 PCOLCE2Q9UKZ9 415 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 TIMELESSQ9UNS1 1208 aa7.37□□□□□ -1.23
SVIP-202ENST00000525670 ARHGEF28Q8N1W1 1705 aaKnown RBP7.37□□□□□ -1.23
SVIP-202ENST00000525670 PTCH1Q13635 1447 aa7.36□□□□□ -1.23
SVIP-202ENST00000525670 YTHDC2Q9H6S0 1430 aaKnown RBP7.36□□□□□ -1.23
SVIP-202ENST00000525670 TONSLQ96HA7 1378 aa7.36□□□□□ -1.23
SVIP-202ENST00000525670 RNGTTO60942 597 aaKnown RBP7.36□□□□□ -1.23
SVIP-202ENST00000525670 GSTT1P30711 240 aa7.36□□□□□ -1.23
SVIP-202ENST00000525670 CDK5R2Q13319 367 aa7.36□□□□□ -1.23
SVIP-202ENST00000525670 ZC3H12AQ5D1E8 599 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 1149.7 ms