RNA–Protein interactions for RNA: ENST00000520096.5

LINC00535-203, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-203ENST00000520096 CDC37L1Q7L3B6 337 aa8.49□□□□□ -1.05
LINC00535-203ENST00000520096 MRPL41Q8IXM3 137 aaKnown RBP8.49□□□□□ -1.05
LINC00535-203ENST00000520096 SMYD4Q8IYR2 804 aaPredicted RBP8.49□□□□□ -1.05
LINC00535-203ENST00000520096 TAB3Q8N5C8 712 aaPredicted RBP8.49□□□□□ -1.05
LINC00535-203ENST00000520096 MICAL1Q8TDZ2 1067 aa8.49□□□□□ -1.05
LINC00535-203ENST00000520096 SLC9A7Q96T83 725 aa8.49□□□□□ -1.05
LINC00535-203ENST00000520096 CEP41Q9BYV8 373 aa8.49□□□□□ -1.05
LINC00535-203ENST00000520096 SSU72Q9NP77 194 aaKnown RBP8.49□□□□□ -1.05
LINC00535-203ENST00000520096 ST7Q9NRC1 585 aa8.49□□□□□ -1.05
LINC00535-203ENST00000520096 CDK11AQ9UQ88 783 aaPredicted RBP8.49□□□□□ -1.05
LINC00535-203ENST00000520096 FAM86C2PA6NEL3 165 aa8.48□□□□□ -1.05
LINC00535-203ENST00000520096 TNFRSF10CO14798 259 aa8.48□□□□□ -1.05
LINC00535-203ENST00000520096 SART1O43290 800 aaKnown RBP8.48□□□□□ -1.05
LINC00535-203ENST00000520096 RAB6AP20340 208 aa8.48□□□□□ -1.05
LINC00535-203ENST00000520096 POLR2BP30876 1174 aaKnown RBP8.48□□□□□ -1.05
LINC00535-203ENST00000520096 SSTR4P31391 388 aa8.48□□□□□ -1.05
LINC00535-203ENST00000520096 DDR2Q16832 855 aa8.48□□□□□ -1.05
LINC00535-203ENST00000520096 CDPF1Q6NVV7 123 aa8.48□□□□□ -1.05
LINC00535-203ENST00000520096 FAM46AQ96IP4 442 aaKnown RBP8.48□□□□□ -1.05
LINC00535-203ENST00000520096 ATAD2BQ9ULI0 1458 aa8.48□□□□□ -1.05
LINC00535-203ENST00000520096 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.47□□□□□ -1.05
LINC00535-203ENST00000520096 GAS2O43903 313 aaKnown RBP8.47□□□□□ -1.05
LINC00535-203ENST00000520096 RAG1P15918 1043 aa8.47□□□□□ -1.05
LINC00535-203ENST00000520096 YARSP54577 528 aaKnown RBP8.47□□□□□ -1.05
LINC00535-203ENST00000520096 PRAMEF13Q5VWM6 474 aa8.47□□□□□ -1.05
LINC00535-203ENST00000520096 INTS3Q68E01 1043 aaKnown RBP8.47□□□□□ -1.05
LINC00535-203ENST00000520096 UNC5AQ6ZN44 842 aa8.47□□□□□ -1.05
LINC00535-203ENST00000520096 NOP9Q86U38 636 aaKnown RBP8.47□□□□□ -1.05
LINC00535-203ENST00000520096 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.47□□□□□ -1.05
LINC00535-203ENST00000520096 SLFN12Q8IYM2 578 aa8.47□□□□□ -1.05
LINC00535-203ENST00000520096 KCT2Q8NC54 265 aa8.47□□□□□ -1.05
LINC00535-203ENST00000520096 ACSS3Q9H6R3 686 aa8.47□□□□□ -1.05
LINC00535-203ENST00000520096 LTBP3Q9NS15 1303 aa8.47□□□□□ -1.05
LINC00535-203ENST00000520096 CCDC85CA6NKD9 419 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 B2RBV5 119 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 SMARCA5O60264 1052 aaPredicted RBP8.46□□□□□ -1.06
LINC00535-203ENST00000520096 USP11P51784 963 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 RASA3Q14644 834 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 SGO2Q562F6 1265 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 FBLIM1Q8WUP2 373 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 MKL1Q969V6 931 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 SRPK1Q96SB4 655 aaKnown RBP8.46□□□□□ -1.06
LINC00535-203ENST00000520096 KIF2CQ99661 725 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 LGR6Q9HBX8 967 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 SNTG2Q9NY99 539 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 PCOLCE2Q9UKZ9 415 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 RAXQ9Y2V3 346 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 DAGLAQ9Y4D2 1042 aa8.46□□□□□ -1.06
LINC00535-203ENST00000520096 TOP2AP11388 1531 aaKnown RBP8.45□□□□□ -1.06
LINC00535-203ENST00000520096 FAM221BA6H8Z2 402 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 MED26O95402 600 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 CST3P01034 146 aaPredicted RBP8.45□□□□□ -1.06
LINC00535-203ENST00000520096 CAP2P40123 477 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 NFE2L2Q16236 605 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 FXNQ16595 210 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.45□□□□□ -1.06
LINC00535-203ENST00000520096 PHACTR4Q8IZ21 702 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 XAGE3Q8WTP9 111 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 DEPDC7Q96QD5 511 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 FOXQ1Q9C009 403 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 SEMA6CQ9H3T2 930 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 MAPK8IP1Q9UQF2 711 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 MSRB2Q9Y3D2 182 aa8.45□□□□□ -1.06
LINC00535-203ENST00000520096 PEG3Q9GZU2 1588 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 GJB6O95452 261 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 IGLV1-40P01703 118 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 NFICP08651 508 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 C6orf15Q6UXA7 325 aaPredicted RBP8.44□□□□□ -1.06
LINC00535-203ENST00000520096 ARMCX6Q7L4S7 300 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 ARMC10Q8N2F6 343 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 BAHD1Q8TBE0 780 aaPredicted RBP8.44□□□□□ -1.06
LINC00535-203ENST00000520096 MRFAP1L1Q96HT8 127 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 KRTAP9-9Q9BYP9 154 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 KRTAP9-4Q9BYQ2 154 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 GOLGA2P5Q9HBQ8 144 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 PCDHB10Q9UN67 800 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 COL17A1Q9UMD9 1497 aaPredicted RBP8.44□□□□□ -1.06
LINC00535-203ENST00000520096 SMARCA2P51531 1590 aa8.44□□□□□ -1.06
LINC00535-203ENST00000520096 RGS13O14921 159 aa8.43□□□□□ -1.06
LINC00535-203ENST00000520096 DYNC1LI2O43237 492 aaPredicted RBP8.43□□□□□ -1.06
LINC00535-203ENST00000520096 DDAH1O94760 285 aa8.43□□□□□ -1.06
LINC00535-203ENST00000520096 UBOX5O94941 541 aa8.43□□□□□ -1.06
LINC00535-203ENST00000520096 ZNF746Q6NUN9 644 aaPredicted RBP8.43□□□□□ -1.06
LINC00535-203ENST00000520096 CCDC74BQ96LY2 380 aa8.43□□□□□ -1.06
LINC00535-203ENST00000520096 SLC12A7Q9Y666 1083 aa8.43□□□□□ -1.06
LINC00535-203ENST00000520096 KIAA1324LA8MWY0 1029 aaPredicted RBP8.42□□□□□ -1.06
LINC00535-203ENST00000520096 LRIG2O94898 1065 aa8.42□□□□□ -1.06
LINC00535-203ENST00000520096 TGFB1P01137 390 aa8.42□□□□□ -1.06
LINC00535-203ENST00000520096 BMP3P12645 472 aa8.42□□□□□ -1.06
LINC00535-203ENST00000520096 UVSSAQ2YD98 709 aa8.42□□□□□ -1.06
LINC00535-203ENST00000520096 FAM178BQ8IXR5 827 aa8.42□□□□□ -1.06
LINC00535-203ENST00000520096 TMEM192Q8IY95 271 aa8.42□□□□□ -1.06
LINC00535-203ENST00000520096 CYB5D2Q8WUJ1 264 aa8.42□□□□□ -1.06
LINC00535-203ENST00000520096 EZH1Q92800 747 aaPredicted RBP8.42□□□□□ -1.06
LINC00535-203ENST00000520096 UTP4Q969X6 686 aaKnown RBP8.42□□□□□ -1.06
LINC00535-203ENST00000520096 MYRFLQ96LU7 910 aa8.42□□□□□ -1.06
LINC00535-203ENST00000520096 CCDC113Q9H0I3 377 aa8.42□□□□□ -1.06
LINC00535-203ENST00000520096 BAZ1BQ9UIG0 1483 aaKnown RBP8.42□□□□□ -1.06
LINC00535-203ENST00000520096 TTBK1Q5TCY1 1321 aaPredicted RBP8.41□□□□□ -1.06
LINC00535-203ENST00000520096 GSC2O15499 205 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms