RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 KCNH4Q9UQ05 1017 aa14□□□□□ -0.17
AP3B1-203ENST00000517940 CSADQ9Y600 493 aa14□□□□□ -0.17
AP3B1-203ENST00000517940 USP17L5A8MUK1 530 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 AOC2O75106 756 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 VEGFBP49765 207 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 ZNF157P51786 506 aaPredicted RBP13.99□□□□□ -0.17
AP3B1-203ENST00000517940 PPATQ06203 517 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 MKRN3Q13064 507 aaKnown RBP13.99□□□□□ -0.17
AP3B1-203ENST00000517940 SEC23AQ15436 765 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 CHST3Q7LGC8 479 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 SLC10A4Q96EP9 437 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 ZKSCAN3Q9BRR0 538 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 WDR18Q9BV38 432 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 RNF41Q9H4P4 317 aaPredicted RBP13.99□□□□□ -0.17
AP3B1-203ENST00000517940 GINM1Q9NU53 330 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 MTMR4Q9NYA4 1195 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 ZHX2Q9Y6X8 837 aa13.99□□□□□ -0.17
AP3B1-203ENST00000517940 MPHOSPH10O00566 681 aaKnown RBP13.98□□□□□ -0.17
AP3B1-203ENST00000517940 RANBP6O60518 1105 aaKnown RBP13.98□□□□□ -0.17
AP3B1-203ENST00000517940 SLC3A2P08195 630 aaKnown RBP13.98□□□□□ -0.17
AP3B1-203ENST00000517940 EEF2P13639 858 aaKnown RBP13.98□□□□□ -0.17
AP3B1-203ENST00000517940 EXOSC10Q01780 885 aaKnown RBP13.98□□□□□ -0.17
AP3B1-203ENST00000517940 RAB3GAP1Q15042 981 aa13.98□□□□□ -0.17
AP3B1-203ENST00000517940 DEFB115Q30KQ5 88 aa13.98□□□□□ -0.17
AP3B1-203ENST00000517940 ENAHQ8N8S7 591 aaPredicted RBP13.98□□□□□ -0.17
AP3B1-203ENST00000517940 CAPNS2Q96L46 248 aa13.98□□□□□ -0.17
AP3B1-203ENST00000517940 TCEANC2Q96MN5 208 aa13.98□□□□□ -0.17
AP3B1-203ENST00000517940 PTPN18Q99952 460 aa13.98□□□□□ -0.17
AP3B1-203ENST00000517940 PICK1Q9NRD5 415 aa13.98□□□□□ -0.17
AP3B1-203ENST00000517940 TCP11L1Q9NUJ3 509 aa13.98□□□□□ -0.17
AP3B1-203ENST00000517940 A0A0G2JLL6 359 aaPredicted RBP13.97□□□□□ -0.17
AP3B1-203ENST00000517940 TSPY2A6NKD2 308 aa13.97□□□□□ -0.17
AP3B1-203ENST00000517940 TSPY3P0CV98 308 aa13.97□□□□□ -0.17
AP3B1-203ENST00000517940 TSPY8P0CW00 308 aa13.97□□□□□ -0.17
AP3B1-203ENST00000517940 RBM25P49756 843 aaKnown RBP13.97□□□□□ -0.17
AP3B1-203ENST00000517940 ICA1Q05084 483 aa13.97□□□□□ -0.17
AP3B1-203ENST00000517940 SPP2Q13103 211 aa13.97□□□□□ -0.17
AP3B1-203ENST00000517940 MTMR2Q13614 643 aa13.97□□□□□ -0.17
AP3B1-203ENST00000517940 PRRT2Q7Z6L0 340 aaPredicted RBP13.97□□□□□ -0.17
AP3B1-203ENST00000517940 ZNF444Q8N0Y2 327 aaPredicted RBP13.97□□□□□ -0.17
AP3B1-203ENST00000517940 ZNF280CQ8ND82 737 aa13.97□□□□□ -0.17
AP3B1-203ENST00000517940 IGDCC4Q8TDY8 1250 aa13.97□□□□□ -0.17
AP3B1-203ENST00000517940 BRI3BPQ8WY22 251 aa13.97□□□□□ -0.17
AP3B1-203ENST00000517940 ESR2Q92731 530 aa13.97□□□□□ -0.17
AP3B1-203ENST00000517940 EMILIN3Q9NT22 766 aa13.97□□□□□ -0.17
AP3B1-203ENST00000517940 WDR33Q9C0J8 1336 aaKnown RBP13.96□□□□□ -0.17
AP3B1-203ENST00000517940 TESPA1A2RU30 521 aaPredicted RBP13.96□□□□□ -0.17
AP3B1-203ENST00000517940 TRIM75PA6NK02 468 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 ZBTB48P10074 688 aaPredicted RBP13.96□□□□□ -0.17
AP3B1-203ENST00000517940 SH3D19Q5HYK7 790 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 GPAT2Q6NUI2 795 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 LRRC47Q8N1G4 583 aaKnown RBP13.96□□□□□ -0.17
AP3B1-203ENST00000517940 NCOA7Q8NI08 942 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 ANKS1AQ92625 1134 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 MKL1Q969V6 931 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 JAKMIP1Q96N16 626 aaKnown RBP13.96□□□□□ -0.17
AP3B1-203ENST00000517940 TBC1D32Q96NH3 1257 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 LRRC2Q9BYS8 371 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 KRT23Q9C075 422 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 ZNF287Q9HBT7 754 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 TOMM22Q9NS69 142 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 NYAP2Q9P242 653 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 TMX2Q9Y320 296 aa13.96□□□□□ -0.17
AP3B1-203ENST00000517940 TNKSO95271 1327 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 IGF2BP3O00425 579 aaKnown RBP eCLIP13.95□□□□□ -0.18
AP3B1-203ENST00000517940 SH2B2O14492 632 aaPredicted RBP13.95□□□□□ -0.18
AP3B1-203ENST00000517940 CXCL11O14625 94 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 PRC1O43663 620 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 BACE1P56817 501 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 TREML2Q5T2D2 321 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 RNF20Q5VTR2 975 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 POTEEQ6S8J3 1075 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 C12orf42Q96LP6 360 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 NEK1Q96PY6 1258 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 TMEM47Q9BQJ4 181 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 KIAA1683Q9H0B3 1180 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 LY9Q9HBG7 655 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 CABP5Q9NP86 173 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 A0A0G2JMZ2 1700 aa13.95□□□□□ -0.18
AP3B1-203ENST00000517940 HTTP42858 3142 aa13.94□□□□□ -0.18
AP3B1-203ENST00000517940 TTLL1O95922 423 aa13.94□□□□□ -0.18
AP3B1-203ENST00000517940 HMGCS2P54868 508 aa13.94□□□□□ -0.18
AP3B1-203ENST00000517940 ANAPC15P60006 121 aa13.94□□□□□ -0.18
AP3B1-203ENST00000517940 KIF23Q02241 960 aaPredicted RBP13.94□□□□□ -0.18
AP3B1-203ENST00000517940 ZYXQ15942 572 aaKnown RBP13.94□□□□□ -0.18
AP3B1-203ENST00000517940 CCDC102AQ96A19 550 aa13.94□□□□□ -0.18
AP3B1-203ENST00000517940 ZSCAN10Q96SZ4 725 aaPredicted RBP13.94□□□□□ -0.18
AP3B1-203ENST00000517940 C22orf23Q9BZE7 217 aa13.94□□□□□ -0.18
AP3B1-203ENST00000517940 UPF3BQ9BZI7 483 aaKnown RBP13.94□□□□□ -0.18
AP3B1-203ENST00000517940 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
AP3B1-203ENST00000517940 ZSWIM6Q9HCJ5 1215 aa13.94□□□□□ -0.18
AP3B1-203ENST00000517940 CLIP2Q9UDT6 1046 aa13.94□□□□□ -0.18
AP3B1-203ENST00000517940 BTBD19C9JJ37 291 aa13.93□□□□□ -0.18
AP3B1-203ENST00000517940 USP17L10C9JJH3 530 aa13.93□□□□□ -0.18
AP3B1-203ENST00000517940 NDUFB10O96000 172 aa13.93□□□□□ -0.18
AP3B1-203ENST00000517940 ZKSCAN1P17029 563 aaPredicted RBP13.93□□□□□ -0.18
AP3B1-203ENST00000517940 CASTP20810 708 aaKnown RBP13.93□□□□□ -0.18
AP3B1-203ENST00000517940 RPS6KB1P23443 525 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms