RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 CDK5RAP2Q96SN8 1893 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 ASNSP08243 561 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 MAPK4P31152 587 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 ERVK-9P63128 1117 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 ERVK-24P63145 666 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 PDE3AQ14432 1141 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 MORN1Q5T089 497 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 GORABQ5T7V8 394 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 GPR142Q7Z601 462 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 PLEKHH3Q7Z736 793 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.93□□□□□ -0.668e-76■■■■□ 24.7
SNHG4-207ENST00000513259 TRMT44Q8IYL2 757 aaKnown RBP10.93□□□□□ -0.66
SNHG4-207ENST00000513259 SOCS4Q8WXH5 440 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 FAM161BQ96MY7 647 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 GUCD1Q96NT3 240 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 PAGR1Q9BTK6 254 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 HDAC5Q9UQL6 1122 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 FRMPD3Q5JV73 1810 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 PRUNE2Q8WUY3 3088 aa10.93□□□□□ -0.66
SNHG4-207ENST00000513259 C19orf81C9J6K1 198 aa10.92□□□□□ -0.66
SNHG4-207ENST00000513259 USP17L10C9JJH3 530 aa10.92□□□□□ -0.66
SNHG4-207ENST00000513259 CCER2I3L3R5 266 aa10.92□□□□□ -0.66
SNHG4-207ENST00000513259 SRGAP3O43295 1099 aa10.92□□□□□ -0.66
SNHG4-207ENST00000513259 GDF11O95390 407 aa10.92□□□□□ -0.66
SNHG4-207ENST00000513259 RGS2P41220 211 aa10.92□□□□□ -0.66
SNHG4-207ENST00000513259 MAPKAPK5Q8IW41 473 aa10.92□□□□□ -0.66
SNHG4-207ENST00000513259 CCAR1Q8IX12 1150 aaKnown RBP10.92□□□□□ -0.66
SNHG4-207ENST00000513259 API5Q9BZZ5 524 aaKnown RBP10.92□□□□□ -0.66
SNHG4-207ENST00000513259 SENP6Q9GZR1 1112 aaPredicted RBP10.92□□□□□ -0.66
SNHG4-207ENST00000513259 DNAJC18Q9H819 358 aa10.92□□□□□ -0.66
SNHG4-207ENST00000513259 EMILIN3Q9NT22 766 aa10.92□□□□□ -0.66
SNHG4-207ENST00000513259 AATFQ9NY61 560 aaKnown RBP eCLIP10.92□□□□□ -0.661e-323■■■■□ 24.9
SNHG4-207ENST00000513259 LRP2BPQ9P2M1 347 aa10.92□□□□□ -0.66
SNHG4-207ENST00000513259 NDUFB9Q9Y6M9 179 aa10.92□□□□□ -0.66
SNHG4-207ENST00000513259 MYO5AQ9Y4I1 1855 aaKnown RBP10.91□□□□□ -0.66
SNHG4-207ENST00000513259 ARID4AP29374 1257 aaPredicted RBP10.91□□□□□ -0.66
SNHG4-207ENST00000513259 MCAMP43121 646 aa10.91□□□□□ -0.66
SNHG4-207ENST00000513259 FAM109BQ6ICB4 259 aaPredicted RBP10.91□□□□□ -0.66
SNHG4-207ENST00000513259 FOXP4Q8IVH2 680 aaPredicted RBP10.91□□□□□ -0.66
SNHG4-207ENST00000513259 TGFBRAP1Q8WUH2 860 aa10.91□□□□□ -0.66
SNHG4-207ENST00000513259 NOL10Q9BSC4 688 aaKnown RBP10.91□□□□□ -0.66
SNHG4-207ENST00000513259 TMEM121BQ9BXQ6 578 aaPredicted RBP10.91□□□□□ -0.66
SNHG4-207ENST00000513259 DHX36Q9H2U1 1008 aaKnown RBP10.91□□□□□ -0.66
SNHG4-207ENST00000513259 SNRKQ9NRH2 765 aa10.91□□□□□ -0.66
SNHG4-207ENST00000513259 FLRT1Q9NZU1 646 aa10.91□□□□□ -0.66
SNHG4-207ENST00000513259 PALD1Q9ULE6 856 aa10.91□□□□□ -0.66
SNHG4-207ENST00000513259 ZBTB21Q9ULJ3 1066 aa10.91□□□□□ -0.66
SNHG4-207ENST00000513259 SPTBN5Q9NRC6 3674 aaKnown RBP10.91□□□□□ -0.66
SNHG4-207ENST00000513259 CNMDO75829 334 aa10.9□□□□□ -0.66
SNHG4-207ENST00000513259 BAG3O95817 575 aa10.9□□□□□ -0.66
SNHG4-207ENST00000513259 PPP4CP60510 307 aa10.9□□□□□ -0.66
SNHG4-207ENST00000513259 MAP2K5Q13163 448 aa10.9□□□□□ -0.66
SNHG4-207ENST00000513259 NAA16Q6N069 864 aaPredicted RBP10.9□□□□□ -0.66
SNHG4-207ENST00000513259 USP17L2Q6R6M4 530 aa10.9□□□□□ -0.66
SNHG4-207ENST00000513259 ADGRA1Q86SQ6 560 aa10.9□□□□□ -0.66
SNHG4-207ENST00000513259 METTL16Q86W50 562 aaKnown RBP10.9□□□□□ -0.66
SNHG4-207ENST00000513259 HS6ST3Q8IZP7 471 aa10.9□□□□□ -0.66
SNHG4-207ENST00000513259 CRACR2BQ8N4Y2 399 aaPredicted RBP10.9□□□□□ -0.66
SNHG4-207ENST00000513259 EDC3Q96F86 508 aaKnown RBP10.9□□□□□ -0.66
SNHG4-207ENST00000513259 APBA2Q99767 749 aa10.9□□□□□ -0.66
SNHG4-207ENST00000513259 LBHD1Q9BQE6 289 aaPredicted RBP10.9□□□□□ -0.66
SNHG4-207ENST00000513259 CWC22Q9HCG8 908 aaKnown RBP10.9□□□□□ -0.66
SNHG4-207ENST00000513259 SAP30BPQ9UHR5 308 aaKnown RBP10.9□□□□□ -0.66
SNHG4-207ENST00000513259 FOCADQ5VW36 1801 aa10.9□□□□□ -0.66
SNHG4-207ENST00000513259 MAST2Q6P0Q8 1798 aa10.9□□□□□ -0.67
SNHG4-207ENST00000513259 FLT1P17948 1338 aa10.89□□□□□ -0.67
SNHG4-207ENST00000513259 UQCRFS1P1P0C7P4 283 aa10.89□□□□□ -0.67
SNHG4-207ENST00000513259 CNGA1P29973 690 aa10.89□□□□□ -0.67
SNHG4-207ENST00000513259 MTX1Q13505 466 aa10.89□□□□□ -0.67
SNHG4-207ENST00000513259 ZYXQ15942 572 aaKnown RBP10.89□□□□□ -0.67
SNHG4-207ENST00000513259 MFSD14CQ5VZR4 134 aa10.89□□□□□ -0.67
SNHG4-207ENST00000513259 TRMT2AQ8IZ69 625 aaKnown RBP10.89□□□□□ -0.67
SNHG4-207ENST00000513259 FBXO22Q8NEZ5 403 aa10.89□□□□□ -0.67
SNHG4-207ENST00000513259 MFRPQ9BY79 579 aa10.89□□□□□ -0.67
SNHG4-207ENST00000513259 TRIM34Q9BYJ4 488 aa10.89□□□□□ -0.67
SNHG4-207ENST00000513259 GINM1Q9NU53 330 aa10.89□□□□□ -0.67
SNHG4-207ENST00000513259 RABGAP1Q9Y3P9 1069 aa10.89□□□□□ -0.67
SNHG4-207ENST00000513259 USP17L15C9J2P7 530 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 USP17L13C9JLJ4 530 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 USP17L11C9JVI0 530 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 USP17L18D6R9N7 530 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 USP17L22D6RA61 530 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 USP17L17D6RBQ6 530 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 USP17L19D6RCP7 530 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 USP17L20D6RJB6 530 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 GLRX3O76003 335 aaKnown RBP10.88□□□□□ -0.67
SNHG4-207ENST00000513259 GH2P01242 217 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 GNAI3P08754 354 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 PTPREP23469 700 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 CYP2C19P33261 490 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 DYNLL1P63167 89 aaKnown RBP10.88□□□□□ -0.67
SNHG4-207ENST00000513259 USP17L24Q0WX57 530 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 G3BP1Q13283 466 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNHG4-207ENST00000513259 WDR78Q5VTH9 848 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 TRPV1Q8NER1 839 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 NPLOC4Q8TAT6 608 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 GTF3C2Q8WUA4 911 aaPredicted RBP10.88□□□□□ -0.67
SNHG4-207ENST00000513259 DDX20Q9UHI6 824 aaKnown RBP10.88□□□□□ -0.67
SNHG4-207ENST00000513259 LTBP2Q14767 1821 aa10.88□□□□□ -0.67
SNHG4-207ENST00000513259 MYH1P12882 1939 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms