RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ANTXR2P58335 489 aa16.77■□□□□ 0.28
USP38-202ENST00000510377 RNASE9P60153 205 aaKnown RBP16.77■□□□□ 0.28
USP38-202ENST00000510377 IRX5P78411 483 aaPredicted RBP16.77■□□□□ 0.28
USP38-202ENST00000510377 FMR1Q06787 632 aaKnown RBP eCLIP16.77■□□□□ 0.282e-6■■■□□ 15.4
USP38-202ENST00000510377 CKAP4Q07065 602 aaKnown RBP16.77■□□□□ 0.28
USP38-202ENST00000510377 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.28
USP38-202ENST00000510377 ABCB6Q9NP58 842 aa16.77■□□□□ 0.28
USP38-202ENST00000510377 BCAMP50895 628 aa16.77■□□□□ 0.28
USP38-202ENST00000510377 NCAPH2Q6IBW4 605 aa16.77■□□□□ 0.28
USP38-202ENST00000510377 USP49Q70CQ1 688 aa16.77■□□□□ 0.28
USP38-202ENST00000510377 AFAP1L1Q8TED9 768 aa16.77■□□□□ 0.28
USP38-202ENST00000510377 BPIFA3Q9BQP9 254 aa16.77■□□□□ 0.28
USP38-202ENST00000510377 TEX13AQ9BXU3 409 aaPredicted RBP16.77■□□□□ 0.28
USP38-202ENST00000510377 GUCY1A2P33402 732 aa16.77■□□□□ 0.27
USP38-202ENST00000510377 ENOX1Q8TC92 643 aaKnown RBP16.77■□□□□ 0.27
USP38-202ENST00000510377 OXER1Q8TDS5 423 aa16.77■□□□□ 0.27
USP38-202ENST00000510377 PTPRUQ92729 1446 aa16.77■□□□□ 0.27
USP38-202ENST00000510377 RABL6Q3YEC7 729 aaPredicted RBP16.77■□□□□ 0.27
USP38-202ENST00000510377 TTC31Q49AM3 519 aaPredicted RBP16.77■□□□□ 0.27
USP38-202ENST00000510377 DZIP1Q86YF9 867 aaKnown RBP16.77■□□□□ 0.27
USP38-202ENST00000510377 RIMS1Q86UR5 1692 aaKnown RBP16.76■□□□□ 0.27
USP38-202ENST00000510377 TNKSO95271 1327 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 NEDD4P46934 1319 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 PLA2G4AP47712 749 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 GRIN1Q05586 938 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 CERS3Q8IU89 383 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 PCDH11XQ9BZA7 1347 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 PCDH11YQ9BZA8 1340 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 MMP1P03956 469 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 RDXP35241 583 aaKnown RBP16.76■□□□□ 0.27
USP38-202ENST00000510377 KRT83P78385 493 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 FAM47AQ5JRC9 791 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 MYO6Q9UM54 1294 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 CCDC151A5D8V7 595 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 PTGDRQ13258 359 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 IPO4Q8TEX9 1081 aaKnown RBP16.76■□□□□ 0.27
USP38-202ENST00000510377 IFT81Q8WYA0 676 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 LPIN2Q92539 896 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 JAKMIP2Q96AA8 810 aa16.76■□□□□ 0.27
USP38-202ENST00000510377 KCNJ18B7U540 433 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 CIAO1O76071 339 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 MNAT1P51948 309 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 MRPS25P82663 173 aaKnown RBP16.75■□□□□ 0.27
USP38-202ENST00000510377 RAD51AP2Q09MP3 1159 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 MORC3Q14149 939 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 KCNJ12Q14500 433 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 MAATS1Q7Z4T9 603 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 PARP3Q9Y6F1 533 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 GNAT2P19087 354 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 EHBP1Q8NDI1 1231 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 TAF4BQ92750 862 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 FHOD1Q9Y613 1164 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 DIP2BQ9P265 1576 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 RTL9Q8NET4 1388 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 KIF5BP33176 963 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 DTHD1Q6ZMT9 781 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 ALS2CR12Q96Q35 445 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 MRPL44Q9H9J2 332 aaKnown RBP16.75■□□□□ 0.27
USP38-202ENST00000510377 L2HGDHQ9H9P8 463 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 HPS5Q9UPZ3 1129 aa16.75■□□□□ 0.27
USP38-202ENST00000510377 NIP7Q9Y221 180 aaKnown RBP eCLIP16.75■□□□□ 0.27
USP38-202ENST00000510377 ATP2C2O75185 946 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 CTSWP56202 376 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 ZNF444Q8N0Y2 327 aaPredicted RBP16.74■□□□□ 0.27
USP38-202ENST00000510377 CSGALNACT2Q8N6G5 542 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 ZNF446Q9NWS9 450 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 ASAP1Q9ULH1 1129 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 ANKRD26Q9UPS8 1709 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 TACC1O75410 805 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 PDE8BO95263 885 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 FMNL1O95466 1100 aaPredicted RBP16.74■□□□□ 0.27
USP38-202ENST00000510377 CCDC152Q4G0S7 254 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 TTC19Q6DKK2 380 aaPredicted RBP16.74■□□□□ 0.27
USP38-202ENST00000510377 SND1Q7KZF4 910 aaKnown RBP eCLIP16.74■□□□□ 0.27
USP38-202ENST00000510377 FAM76AQ8TAV0 307 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 COL15A1P39059 1388 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 CYP2D7A0A087X1C5 515 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 CYP2C19P33261 490 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 PPARAQ07869 468 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 NCAPHQ15003 741 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 FAM98CQ17RN3 349 aaKnown RBP16.74■□□□□ 0.27
USP38-202ENST00000510377 ZBTB38Q8NAP3 1195 aaPredicted RBP16.74■□□□□ 0.27
USP38-202ENST00000510377 NAA15Q9BXJ9 866 aaKnown RBP16.74■□□□□ 0.27
USP38-202ENST00000510377 FAM204AQ9H8W3 233 aa16.74■□□□□ 0.27
USP38-202ENST00000510377 LUC7LQ9NQ29 371 aaKnown RBP16.74■□□□□ 0.27
USP38-202ENST00000510377 H2AFXP16104 143 aaPredicted RBP16.73■□□□□ 0.27
USP38-202ENST00000510377 CCDC40Q4G0X9 1142 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 UIMC1Q96RL1 719 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 UTYO14607 1347 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 ITSN1Q15811 1721 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 EBAG9O00559 213 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 UBE3CQ15386 1083 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 LCORLQ8N3X6 602 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 TRIML1Q8N9V2 468 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 SUGCTQ9HAC7 445 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 RRP15Q9Y3B9 282 aaKnown RBP16.73■□□□□ 0.27
USP38-202ENST00000510377 EPN1Q9Y6I3 576 aaPredicted RBP16.73■□□□□ 0.27
USP38-202ENST00000510377 FAM205CA6NFA0 338 aa16.73■□□□□ 0.27
USP38-202ENST00000510377 PDE8AO60658 829 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms