RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PLAAQ9Y263 795 aa7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 CD2APQ9Y5K6 639 aa7.48□□□□□ -1.21
HMGB1P3-201ENST00000502802 A0A0A0MRY4 1105 aa7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 ANKRD34BA5PLL1 514 aa7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 WISP1O95388 367 aa7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 ADH5P11766 374 aa7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 CAP2P40123 477 aa7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 SOX4Q06945 474 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 SLBPQ14493 270 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 KIAA1211Q6ZU35 1233 aa7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 PPFIBP1Q86W92 1011 aa7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 SMARCC1Q92922 1105 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 APBA2Q99767 749 aa7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 DPH2Q9BQC3 489 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P3-201ENST00000502802 CLEC3AO75596 197 aa7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 CST3P01034 146 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 TP53P04637 393 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 NEFMP07197 916 aa7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 HCLS1P14317 486 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 HOXB4P17483 251 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 AMPD3Q01432 767 aa7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 ACAD11Q709F0 780 aa7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 DYMQ7RTS9 669 aa7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 BAHD1Q8TBE0 780 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 CYB5D2Q8WUJ1 264 aa7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 GSX1Q9H4S2 264 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 FAM86C1Q9NVL1 165 aa7.46□□□□□ -1.22
HMGB1P3-201ENST00000502802 A0A1W2PQU0 124 aa7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 RNGTTO60942 597 aaKnown RBP7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 PRAMEF13Q5VWM6 474 aa7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 TDRD10Q5VZ19 366 aaKnown RBP7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 HEATR6Q6AI08 1181 aaKnown RBP7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 ZNF787Q6DD87 383 aa7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 UBE3DQ7Z6J8 389 aa7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 NINJ1Q92982 152 aa7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 ISL2Q96A47 359 aa7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 PIDD1Q9HB75 910 aa7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 RRAGCQ9HB90 399 aa7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 METTL14Q9HCE5 456 aaKnown RBP7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 SSU72Q9NP77 194 aaKnown RBP7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 SUSD2Q9UGT4 822 aa7.45□□□□□ -1.22
HMGB1P3-201ENST00000502802 C9IYK1 514 aa7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 TIAF1O95411 115 aa7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 VIL1P09327 827 aaKnown RBP7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 ASPAP45381 313 aa7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 HSP90AA2PQ14568 343 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 C21orf62-AS1Q17RA5 79 aa7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 IGF2-ASQ6U949 168 aa7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 KRT26Q7Z3Y9 468 aa7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 CCDC144CPQ8IYA2 1237 aa7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 RPUSD2Q8IZ73 545 aaKnown RBP7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 C12orf50Q8NA57 414 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 HAUS7Q99871 368 aa7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 FOXQ1Q9C009 403 aa7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 MRPL18Q9H0U6 180 aaKnown RBP7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 LRP2BPQ9P2M1 347 aa7.44□□□□□ -1.22
HMGB1P3-201ENST00000502802 TRAV20A0A0B4J274 112 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 SPDYE3A6NKU9 549 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 RFPL3O75679 317 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 EPHX1P07099 455 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 DRD2P14416 443 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 L1CAMP32004 1257 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 AXDND1Q5T1B0 1012 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 FOXB2Q5VYV0 432 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 NIM1KQ8IY84 436 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 SMYD4Q8IYR2 804 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 MFSD2AQ8NA29 543 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 NEDD1Q8NHV4 660 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 KISS1RQ969F8 398 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 TRIM11Q96F44 468 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 EXOC2Q96KP1 924 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 IPO9Q96P70 1041 aaKnown RBP7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 CDC6Q99741 560 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 DHRS4Q9BTZ2 278 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 ARHGEF4Q9NR80 690 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 PCOLCE2Q9UKZ9 415 aa7.43□□□□□ -1.22
HMGB1P3-201ENST00000502802 MARCH6O60337 910 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 TRIM28Q13263 835 aaKnown RBP7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 PABPC4Q13310 644 aaKnown RBP eCLIP7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 TM4SF20Q53R12 229 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 ANKRD39Q53RE8 183 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 FDX2Q6P4F2 183 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 LRRN4CLQ8ND94 238 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 WHAMMQ8TF30 809 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 XAGE3Q8WTP9 111 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 MFSD3Q96ES6 412 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 AARSD1Q9BTE6 412 aaKnown RBP7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 PLVAPQ9BX97 442 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 KLHL25Q9H0H3 589 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 NCOA5Q9HCD5 579 aaKnown RBP7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 ENAMQ9NRM1 1142 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 ACTL7BQ9Y614 415 aa7.42□□□□□ -1.22
HMGB1P3-201ENST00000502802 PLD2O14939 933 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 CBFA2T2O43439 604 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 LRIG2O94898 1065 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 PPP2R2AP63151 447 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 CBX2Q14781 532 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms