RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 RPS6KA3P51812 740 aa6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 SF3A1Q15459 793 aaKnown RBP6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 ZRSR1Q15695 479 aaKnown RBP6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 KCTD19Q17RG1 926 aaPredicted RBP6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 DDX46Q7L014 1031 aaKnown RBP6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 ERC1Q8IUD2 1116 aa6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 CCDC24Q8N4L8 307 aa6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 METTL14Q9HCE5 456 aaKnown RBP6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 DMGDHQ9UI17 866 aaKnown RBP6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 TAF6LQ9Y6J9 622 aa6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 GRIN2DO15399 1336 aa6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 PPP1R37O75864 691 aa6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 NFXL1Q6ZNB6 911 aa6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 GPR161Q8N6U8 529 aaKnown RBP6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 PLBD2Q8NHP8 589 aa6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 CNNM1Q9NRU3 951 aa6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 SNX14Q9Y5W7 946 aa6.55□□□□□ -1.36
SOX2-OT-218ENST00000498731 ERVV-2B6SEH9 535 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 COQ9O75208 318 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 RAB27AP51159 221 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 CLNS1AP54105 237 aaKnown RBP6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 NAP1L1P55209 391 aaKnown RBP6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 C4orf46Q504U0 113 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 FKBP15Q5T1M5 1219 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 JAKMIP3Q5VZ66 844 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 CHADLQ6NUI6 762 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 TLDC1Q6P9B6 456 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 NOA1Q8NC60 698 aaKnown RBP6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 DBNDD2Q9BQY9 259 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 POLR3EQ9NVU0 708 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 SMC3Q9UQE7 1217 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 ZBTB1Q9Y2K1 713 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 BIN1O00499 593 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 KIF3CO14782 793 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 ATP8B1O43520 1251 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 GNG11P61952 73 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 PTPROQ16827 1216 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 PRPF40BQ6NWY9 871 aaKnown RBP6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 SARM1Q6SZW1 724 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 ARHGEF10LQ9HCE6 1279 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 CHST12Q9NRB3 414 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 KCND1Q9NSA2 647 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 CPSF2Q9P2I0 782 aaKnown RBP6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 TPCN1Q9ULQ1 816 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 IQSEC3Q9UPP2 1182 aaPredicted RBP6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 SPATA31A1Q5TZJ5 1347 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 SPATA31A5Q5VU36 1347 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 SPATA31A7Q8IWB4 1347 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 ZEB2O60315 1214 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 SASH1O94885 1247 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 INPP5BP32019 993 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 TXLNAP40222 546 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 SCNN1BP51168 640 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 NAA25Q14CX7 972 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 WASHC4Q2M389 1173 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 DPCR1Q3MIW9 517 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 AP1ARQ63HQ0 302 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 CDCA2Q69YH5 1023 aaPredicted RBP6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 STK11IPQ8N1F8 1099 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 LEO1Q8WVC0 666 aaPredicted RBP6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 TBC1D5Q92609 795 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 SPDL1Q96EA4 605 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 MRPL44Q9H9J2 332 aaKnown RBP6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 RYDENQ9NUL5 291 aaKnown RBP6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 CEP126Q9P2H0 1117 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 PCNTO95613 3336 aa6.54□□□□□ -1.36
SOX2-OT-218ENST00000498731 HEG1Q9ULI3 1381 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 PHLPP2Q6ZVD8 1323 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 CDHR2Q9BYE9 1310 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 GOLGA6L19H0YKK7 550 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 SGSM2O43147 1006 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 FECHP22830 423 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 NF2P35240 595 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 USP5P45974 858 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 IRAK1P51617 712 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 EIF5P55010 431 aaKnown RBP6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 MRPS25P82663 173 aaKnown RBP6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 HLFQ16534 295 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 LRRC24Q50LG9 513 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 DZIP3Q86Y13 1208 aaKnown RBP6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 TMEM139Q8IV31 216 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 RUFY2Q8WXA3 655 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 CABS1Q96KC9 395 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 FAM227BQ96M60 508 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 YIPF2Q9BWQ6 316 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 PUS3Q9BZE2 481 aaKnown RBP6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 HSD3B7Q9H2F3 369 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 AGPSO00116 658 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 CHGBP05060 677 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 TBX4P57082 545 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 IRX1P78414 480 aaPredicted RBP6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 WLSQ5T9L3 541 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 FAM196AQ6ZSG2 479 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 BICD2Q8TD16 824 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 KAZALD1Q96I82 304 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 UBA5Q9GZZ9 404 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 OSBPL5Q9H0X9 879 aaPredicted RBP6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 RGPD5Q99666 1765 aa6.53□□□□□ -1.36
SOX2-OT-218ENST00000498731 TUBGCP6Q96RT7 1819 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms