RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 RNF26Q9BY78 433 aaPredicted RBP23.28■■□□□ 1.32
LINC01558-202ENST00000495520 DEXIO95424 95 aa23.28■■□□□ 1.32
LINC01558-202ENST00000495520 XRCC6P12956 609 aaKnown RBP eCLIP23.28■■□□□ 1.32
LINC01558-202ENST00000495520 CRKP46108 304 aa23.28■■□□□ 1.32
LINC01558-202ENST00000495520 CDK8P49336 464 aa23.28■■□□□ 1.32
LINC01558-202ENST00000495520 RBM5P52756 815 aaKnown RBP eCLIP23.28■■□□□ 1.32
LINC01558-202ENST00000495520 CCDC183Q5T5S1 534 aa23.28■■□□□ 1.32
LINC01558-202ENST00000495520 ZNF444Q8N0Y2 327 aaPredicted RBP23.28■■□□□ 1.32
LINC01558-202ENST00000495520 PGBD1Q96JS3 809 aa23.28■■□□□ 1.32
LINC01558-202ENST00000495520 USP28Q96RU2 1077 aa23.28■■□□□ 1.32
LINC01558-202ENST00000495520 RTEL1Q9NZ71 1219 aa23.28■■□□□ 1.32
LINC01558-202ENST00000495520 ADAMTSL1Q8N6G6 1762 aa23.28■■□□□ 1.32
LINC01558-202ENST00000495520 KIF28PB7ZC32 967 aa23.27■■□□□ 1.32
LINC01558-202ENST00000495520 LRSAM1Q6UWE0 723 aa23.27■■□□□ 1.32
LINC01558-202ENST00000495520 GRPEL1Q9HAV7 217 aa23.27■■□□□ 1.32
LINC01558-202ENST00000495520 RNF181Q9P0P0 153 aa23.27■■□□□ 1.32
LINC01558-202ENST00000495520 GJA3Q9Y6H8 435 aa23.27■■□□□ 1.32
LINC01558-202ENST00000495520 UTRNP46939 3433 aa23.27■■□□□ 1.32
LINC01558-202ENST00000495520 SBF1O95248 1867 aa23.27■■□□□ 1.32
LINC01558-202ENST00000495520 ZNF541Q9H0D2 1346 aa23.26■■□□□ 1.31
LINC01558-202ENST00000495520 U2AF2P26368 475 aaKnown RBP eCLIP23.26■■□□□ 1.31
LINC01558-202ENST00000495520 GUCY1A2P33402 732 aa23.26■■□□□ 1.31
LINC01558-202ENST00000495520 GABPAQ06546 454 aa23.26■■□□□ 1.31
LINC01558-202ENST00000495520 SLC4A8Q2Y0W8 1093 aa23.26■■□□□ 1.31
LINC01558-202ENST00000495520 CDC42EP5Q6NZY7 148 aa23.26■■□□□ 1.31
LINC01558-202ENST00000495520 TMTC3Q6ZXV5 915 aa23.26■■□□□ 1.31
LINC01558-202ENST00000495520 SLC44A5Q8NCS7 719 aa23.26■■□□□ 1.31
LINC01558-202ENST00000495520 AGBL3Q8NEM8 1001 aa23.26■■□□□ 1.31
LINC01558-202ENST00000495520 GMLQ99445 158 aa23.26■■□□□ 1.31
LINC01558-202ENST00000495520 USP40Q9NVE5 1235 aa23.26■■□□□ 1.31
LINC01558-202ENST00000495520 ECM29Q5VYK3 1845 aa23.26■■□□□ 1.31
LINC01558-202ENST00000495520 UBE2Q2LH0YL09 131 aa23.25■■□□□ 1.31
LINC01558-202ENST00000495520 PRPF3O43395 683 aaKnown RBP23.25■■□□□ 1.31
LINC01558-202ENST00000495520 NOVP48745 357 aa23.25■■□□□ 1.31
LINC01558-202ENST00000495520 MYSM1Q5VVJ2 828 aa23.25■■□□□ 1.31
LINC01558-202ENST00000495520 NEDD1Q8NHV4 660 aa23.25■■□□□ 1.31
LINC01558-202ENST00000495520 PCDHAC2Q9Y5I4 1007 aa23.25■■□□□ 1.31
LINC01558-202ENST00000495520 MYH1P12882 1939 aa23.25■■□□□ 1.31
LINC01558-202ENST00000495520 DICER1Q9UPY3 1922 aaKnown RBP23.25■■□□□ 1.31
LINC01558-202ENST00000495520 LETM1O95202 739 aaPredicted RBP23.25■■□□□ 1.31
LINC01558-202ENST00000495520 DDX4Q9NQI0 724 aaKnown RBP23.25■■□□□ 1.31
LINC01558-202ENST00000495520 POLR3EQ9NVU0 708 aa23.25■■□□□ 1.31
LINC01558-202ENST00000495520 SERPINA10Q9UK55 444 aa23.25■■□□□ 1.31
LINC01558-202ENST00000495520 HDAC9Q9UKV0 1011 aa23.25■■□□□ 1.31
LINC01558-202ENST00000495520 SYCE3A1L190 88 aa23.24■■□□□ 1.31
LINC01558-202ENST00000495520 GRIN3BO60391 1043 aa23.24■■□□□ 1.31
LINC01558-202ENST00000495520 NASPP49321 788 aaPredicted RBP23.24■■□□□ 1.31
LINC01558-202ENST00000495520 TRIM29Q14134 588 aa23.24■■□□□ 1.31
LINC01558-202ENST00000495520 OGFOD1Q8N543 542 aa23.24■■□□□ 1.31
LINC01558-202ENST00000495520 NPM3O75607 178 aaKnown RBP23.23■■□□□ 1.31
LINC01558-202ENST00000495520 TSPY3P0CV98 308 aa23.23■■□□□ 1.31
LINC01558-202ENST00000495520 TSPY8P0CW00 308 aa23.23■■□□□ 1.31
LINC01558-202ENST00000495520 PKN1Q16512 942 aa23.23■■□□□ 1.31
LINC01558-202ENST00000495520 C9orf131Q5VYM1 1079 aa23.23■■□□□ 1.31
LINC01558-202ENST00000495520 CMTR1Q8N1G2 835 aaKnown RBP23.23■■□□□ 1.31
LINC01558-202ENST00000495520 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.23■■□□□ 1.31
LINC01558-202ENST00000495520 PLEKHA8P1O95397 391 aa23.22■■□□□ 1.31
LINC01558-202ENST00000495520 YEATS4O95619 227 aa23.22■■□□□ 1.31
LINC01558-202ENST00000495520 CFAP100Q494V2 611 aa23.22■■□□□ 1.31
LINC01558-202ENST00000495520 CTCFLQ8NI51 663 aaPredicted RBP23.22■■□□□ 1.31
LINC01558-202ENST00000495520 FTOQ9C0B1 505 aaKnown RBP eCLIP23.22■■□□□ 1.31
LINC01558-202ENST00000495520 KAT14Q9H8E8 782 aa23.22■■□□□ 1.31
LINC01558-202ENST00000495520 MMP1P03956 469 aa23.22■■□□□ 1.31
LINC01558-202ENST00000495520 LIG1P18858 919 aa23.22■■□□□ 1.31
LINC01558-202ENST00000495520 LINC00301Q8NCQ3 95 aa23.22■■□□□ 1.31
LINC01558-202ENST00000495520 OSBPL5Q9H0X9 879 aaPredicted RBP23.22■■□□□ 1.31
LINC01558-202ENST00000495520 PLIN4Q96Q06 1357 aa23.21■■□□□ 1.31
LINC01558-202ENST00000495520 GOLGA6L4A6NEF3 574 aa23.21■■□□□ 1.31
LINC01558-202ENST00000495520 RPS12P25398 132 aaKnown RBP23.21■■□□□ 1.31
LINC01558-202ENST00000495520 GMPSP49915 693 aaPredicted RBP23.21■■□□□ 1.31
LINC01558-202ENST00000495520 SRBD1Q8N5C6 995 aaKnown RBP23.21■■□□□ 1.31
LINC01558-202ENST00000495520 IDI2Q9BXS1 227 aa23.21■■□□□ 1.31
LINC01558-202ENST00000495520 CNTNAP5Q8WYK1 1306 aa23.2■■□□□ 1.31
LINC01558-202ENST00000495520 KIF5BP33176 963 aa23.2■■□□□ 1.3
LINC01558-202ENST00000495520 GRM4Q14833 912 aa23.2■■□□□ 1.3
LINC01558-202ENST00000495520 CCDC82Q8N4S0 544 aa23.2■■□□□ 1.3
LINC01558-202ENST00000495520 PNMA1Q8ND90 353 aa23.2■■□□□ 1.3
LINC01558-202ENST00000495520 FOXP1Q9H334 677 aaPredicted RBP23.2■■□□□ 1.3
LINC01558-202ENST00000495520 TAOK2Q9UL54 1235 aa23.2■■□□□ 1.3
LINC01558-202ENST00000495520 SHTN1A0MZ66 631 aa23.19■■□□□ 1.3
LINC01558-202ENST00000495520 CEBPZQ03701 1054 aaKnown RBP23.19■■□□□ 1.3
LINC01558-202ENST00000495520 PICALMQ13492 652 aa23.19■■□□□ 1.3
LINC01558-202ENST00000495520 TMEM47Q9BQJ4 181 aa23.19■■□□□ 1.3
LINC01558-202ENST00000495520 SWAP70Q9UH65 585 aa23.19■■□□□ 1.3
LINC01558-202ENST00000495520 V9GY48 417 aaPredicted RBP23.19■■□□□ 1.3
LINC01558-202ENST00000495520 AKAP17AQ02040 695 aaKnown RBP23.19■■□□□ 1.3
LINC01558-202ENST00000495520 DLGAP5Q15398 846 aa23.19■■□□□ 1.3
LINC01558-202ENST00000495520 ANO1Q5XXA6 986 aa23.19■■□□□ 1.3
LINC01558-202ENST00000495520 SHISA4Q96DD7 197 aa23.19■■□□□ 1.3
LINC01558-202ENST00000495520 EHD4Q9H223 541 aa23.19■■□□□ 1.3
LINC01558-202ENST00000495520 CLIC4Q9Y696 253 aa23.19■■□□□ 1.3
LINC01558-202ENST00000495520 NFIAQ12857 509 aa23.18■■□□□ 1.3
LINC01558-202ENST00000495520 SAFBQ15424 915 aaKnown RBP eCLIP23.18■■□□□ 1.3
LINC01558-202ENST00000495520 GPC2Q8N158 579 aa23.18■■□□□ 1.3
LINC01558-202ENST00000495520 KCNG4Q8TDN1 519 aa23.18■■□□□ 1.3
LINC01558-202ENST00000495520 PRMT6Q96LA8 375 aaPredicted RBP23.18■■□□□ 1.3
LINC01558-202ENST00000495520 DDX19AQ9NUU7 478 aaKnown RBP23.18■■□□□ 1.3
LINC01558-202ENST00000495520 IGKV6D-41A0A0C4DH26 115 aa23.17■■□□□ 1.3
LINC01558-202ENST00000495520 GNAQP50148 359 aa23.17■■□□□ 1.3
LINC01558-202ENST00000495520 NOSTRINQ8IVI9 506 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms