RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 PABPC4Q13310 644 aaKnown RBP eCLIP22.84■■□□□ 1.25
PCMT1-209ENST00000494411 IFNL3Q8IZI9 196 aa22.84■■□□□ 1.25
PCMT1-209ENST00000494411 ACER1Q8TDN7 264 aa22.84■■□□□ 1.25
PCMT1-209ENST00000494411 EMILIN3Q9NT22 766 aa22.84■■□□□ 1.25
PCMT1-209ENST00000494411 ROBO3Q96MS0 1386 aa22.84■■□□□ 1.25
PCMT1-209ENST00000494411 KIF22Q14807 665 aa22.83■■□□□ 1.25
PCMT1-209ENST00000494411 ZYXQ15942 572 aaKnown RBP22.83■■□□□ 1.25
PCMT1-209ENST00000494411 USP17L2Q6R6M4 530 aa22.83■■□□□ 1.25
PCMT1-209ENST00000494411 TMEM179Q6ZVK1 233 aa22.83■■□□□ 1.25
PCMT1-209ENST00000494411 STK11IPQ8N1F8 1099 aa22.83■■□□□ 1.25
PCMT1-209ENST00000494411 FAM227BQ96M60 508 aa22.83■■□□□ 1.25
PCMT1-209ENST00000494411 NACAP1Q9BZK3 213 aa22.83■■□□□ 1.25
PCMT1-209ENST00000494411 ASCC2Q9H1I8 757 aaPredicted RBP22.83■■□□□ 1.25
PCMT1-209ENST00000494411 A0A0D9SFI3 127 aa22.82■■□□□ 1.24
PCMT1-209ENST00000494411 OSBPP22059 807 aa22.82■■□□□ 1.24
PCMT1-209ENST00000494411 ARHGEF6Q15052 776 aa22.82■■□□□ 1.24
PCMT1-209ENST00000494411 CLEC10AQ8IUN9 316 aa22.82■■□□□ 1.24
PCMT1-209ENST00000494411 KIAA1683Q9H0B3 1180 aa22.82■■□□□ 1.24
PCMT1-209ENST00000494411 HELLSQ9NRZ9 838 aa22.82■■□□□ 1.24
PCMT1-209ENST00000494411 GREB1LQ9C091 1923 aaPredicted RBP22.81■■□□□ 1.24
PCMT1-209ENST00000494411 FOXP2O15409 715 aa22.81■■□□□ 1.24
PCMT1-209ENST00000494411 CTGFP29279 349 aa22.81■■□□□ 1.24
PCMT1-209ENST00000494411 NMIQ13287 307 aaPredicted RBP22.81■■□□□ 1.24
PCMT1-209ENST00000494411 TICAM2Q86XR7 235 aa22.81■■□□□ 1.24
PCMT1-209ENST00000494411 CCDC17Q96LX7 622 aa22.81■■□□□ 1.24
PCMT1-209ENST00000494411 PTPN22Q9Y2R2 807 aa22.81■■□□□ 1.24
PCMT1-209ENST00000494411 HOXA7P31268 230 aaPredicted RBP22.8■■□□□ 1.24
PCMT1-209ENST00000494411 USP14P54578 494 aa22.8■■□□□ 1.24
PCMT1-209ENST00000494411 IRX3P78415 501 aaPredicted RBP22.8■■□□□ 1.24
PCMT1-209ENST00000494411 VPS53Q5VIR6 699 aa22.8■■□□□ 1.24
PCMT1-209ENST00000494411 C12orf42Q96LP6 360 aa22.8■■□□□ 1.24
PCMT1-209ENST00000494411 NAPBQ9H115 298 aa22.8■■□□□ 1.24
PCMT1-209ENST00000494411 A0A1W2PRG0 241 aa22.79■■□□□ 1.24
PCMT1-209ENST00000494411 PSMC4P43686 418 aa22.79■■□□□ 1.24
PCMT1-209ENST00000494411 MCMDC2Q4G0Z9 681 aa22.79■■□□□ 1.24
PCMT1-209ENST00000494411 ANKRD13CQ8N6S4 541 aa22.79■■□□□ 1.24
PCMT1-209ENST00000494411 TRIM47Q96LD4 638 aa22.79■■□□□ 1.24
PCMT1-209ENST00000494411 VCAM1P19320 739 aa22.78■■□□□ 1.24
PCMT1-209ENST00000494411 SDSP20132 328 aa22.78■■□□□ 1.24
PCMT1-209ENST00000494411 RASA1P20936 1047 aa22.78■■□□□ 1.24
PCMT1-209ENST00000494411 ICA1Q05084 483 aa22.78■■□□□ 1.24
PCMT1-209ENST00000494411 MKNK2Q9HBH9 465 aa22.78■■□□□ 1.24
PCMT1-209ENST00000494411 SLC34A2O95436 690 aa22.77■■□□□ 1.24
PCMT1-209ENST00000494411 FMNL1O95466 1100 aaPredicted RBP22.77■■□□□ 1.24
PCMT1-209ENST00000494411 GCLCP48506 637 aaPredicted RBP22.77■■□□□ 1.24
PCMT1-209ENST00000494411 FAM110CQ1W6H9 321 aa22.77■■□□□ 1.24
PCMT1-209ENST00000494411 ZNF589Q86UQ0 364 aaPredicted RBP22.77■■□□□ 1.24
PCMT1-209ENST00000494411 SIAH1Q8IUQ4 282 aa22.77■■□□□ 1.24
PCMT1-209ENST00000494411 P2RX7Q99572 595 aaKnown RBP22.77■■□□□ 1.24
PCMT1-209ENST00000494411 GNRH1P01148 92 aa22.76■■□□□ 1.23
PCMT1-209ENST00000494411 FCGRTP55899 365 aa22.76■■□□□ 1.23
PCMT1-209ENST00000494411 HERVK_113P62684 666 aa22.76■■□□□ 1.23
PCMT1-209ENST00000494411 PPARAQ07869 468 aa22.76■■□□□ 1.23
PCMT1-209ENST00000494411 TTC22Q5TAA0 569 aa22.76■■□□□ 1.23
PCMT1-209ENST00000494411 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.76■■□□□ 1.23
PCMT1-209ENST00000494411 ARHGEF10LQ9HCE6 1279 aa22.76■■□□□ 1.23
PCMT1-209ENST00000494411 PTCH2Q9Y6C5 1203 aa22.76■■□□□ 1.23
PCMT1-209ENST00000494411 DOCK3Q8IZD9 2030 aa22.75■■□□□ 1.23
PCMT1-209ENST00000494411 PRDM1O75626 825 aa22.75■■□□□ 1.23
PCMT1-209ENST00000494411 GSPT1P15170 499 aaKnown RBP22.75■■□□□ 1.23
PCMT1-209ENST00000494411 DIAPH3Q9NSV4 1193 aa22.75■■□□□ 1.23
PCMT1-209ENST00000494411 CCDC171Q6TFL3 1326 aa22.75■■□□□ 1.23
PCMT1-209ENST00000494411 USP17L15C9J2P7 530 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 USP17L13C9JLJ4 530 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 USP17L11C9JVI0 530 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 USP17L18D6R9N7 530 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 USP17L22D6RA61 530 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 USP17L17D6RBQ6 530 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 USP17L19D6RCP7 530 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 USP17L20D6RJB6 530 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 EEF2P13639 858 aaKnown RBP22.74■■□□□ 1.23
PCMT1-209ENST00000494411 ATP2B2Q01814 1243 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 USP17L24Q0WX57 530 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 RPAP3Q9H6T3 665 aaPredicted RBP22.74■■□□□ 1.23
PCMT1-209ENST00000494411 SH2D4AQ9H788 454 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 KANSL2Q9H9L4 492 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 ZNF287Q9HBT7 754 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 SRRDQ9UH36 339 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 TMX2Q9Y320 296 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 MYH4Q9Y623 1939 aa22.74■■□□□ 1.23
PCMT1-209ENST00000494411 PEX10O60683 326 aa22.73■■□□□ 1.23
PCMT1-209ENST00000494411 SLC3A2P08195 630 aaKnown RBP22.73■■□□□ 1.23
PCMT1-209ENST00000494411 KIAA1755Q5JYT7 1200 aa22.73■■□□□ 1.23
PCMT1-209ENST00000494411 CWC27Q6UX04 472 aaKnown RBP22.73■■□□□ 1.23
PCMT1-209ENST00000494411 CATSPERGQ6ZRH7 1159 aa22.73■■□□□ 1.23
PCMT1-209ENST00000494411 MORF4L1Q9UBU8 362 aa22.73■■□□□ 1.23
PCMT1-209ENST00000494411 MYPNQ86TC9 1320 aa22.73■■□□□ 1.23
PCMT1-209ENST00000494411 HSPD1P10809 573 aaKnown RBP22.72■■□□□ 1.23
PCMT1-209ENST00000494411 HOXD10P28358 340 aa22.72■■□□□ 1.23
PCMT1-209ENST00000494411 PRMT2P55345 433 aa22.72■■□□□ 1.23
PCMT1-209ENST00000494411 PDE4BQ07343 736 aa22.72■■□□□ 1.23
PCMT1-209ENST00000494411 ALX1Q15699 326 aa22.72■■□□□ 1.23
PCMT1-209ENST00000494411 ZNF444Q8N0Y2 327 aaPredicted RBP22.72■■□□□ 1.23
PCMT1-209ENST00000494411 TXNRD2Q9NNW7 524 aa22.72■■□□□ 1.23
PCMT1-209ENST00000494411 RLFQ13129 1914 aa22.72■■□□□ 1.23
PCMT1-209ENST00000494411 PARP14Q460N5 1801 aa22.71■■□□□ 1.23
PCMT1-209ENST00000494411 HIP1O00291 1037 aa22.71■■□□□ 1.23
PCMT1-209ENST00000494411 TNPO2O14787 897 aaKnown RBP22.71■■□□□ 1.23
PCMT1-209ENST00000494411 SOX10P56693 466 aa22.71■■□□□ 1.23
PCMT1-209ENST00000494411 PRKCZQ05513 592 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms