RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 EVI5LQ96CN4 794 aa17.62■□□□□ 0.41
ATG4B-224ENST00000494132 TRIM47Q96LD4 638 aa17.62■□□□□ 0.41
ATG4B-224ENST00000494132 ASCC2Q9H1I8 757 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-224ENST00000494132 ARPP21Q9UBL0 812 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-224ENST00000494132 SWAP70Q9UH65 585 aa17.62■□□□□ 0.41
ATG4B-224ENST00000494132 PNMA3Q9UL41 463 aa17.62■□□□□ 0.41
ATG4B-224ENST00000494132 PARP14Q460N5 1801 aa17.61■□□□□ 0.41
ATG4B-224ENST00000494132 C19orf81C9J6K1 198 aa17.61■□□□□ 0.41
ATG4B-224ENST00000494132 FMNL1O95466 1100 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-224ENST00000494132 OSBPP22059 807 aa17.61■□□□□ 0.41
ATG4B-224ENST00000494132 TDO2P48775 406 aa17.61■□□□□ 0.41
ATG4B-224ENST00000494132 USP17L2Q6R6M4 530 aa17.61■□□□□ 0.41
ATG4B-224ENST00000494132 C16orf86Q6ZW13 317 aa17.61■□□□□ 0.41
ATG4B-224ENST00000494132 RILPL2Q969X0 211 aa17.61■□□□□ 0.41
ATG4B-224ENST00000494132 IRX3P78415 501 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-224ENST00000494132 PABPC4Q13310 644 aaKnown RBP eCLIP17.6■□□□□ 0.41
ATG4B-224ENST00000494132 IFNL3Q8IZI9 196 aa17.6■□□□□ 0.41
ATG4B-224ENST00000494132 HTTP42858 3142 aa17.59■□□□□ 0.41
ATG4B-224ENST00000494132 RLFQ13129 1914 aa17.59■□□□□ 0.41
ATG4B-224ENST00000494132 A0A0D9SFI3 127 aa17.59■□□□□ 0.41
ATG4B-224ENST00000494132 A0A1W2PRG0 241 aa17.59■□□□□ 0.41
ATG4B-224ENST00000494132 MYCP01106 439 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-224ENST00000494132 GNAT2P19087 354 aa17.59■□□□□ 0.41
ATG4B-224ENST00000494132 ARHGEF6Q15052 776 aa17.59■□□□□ 0.41
ATG4B-224ENST00000494132 TMEM179Q6ZVK1 233 aa17.59■□□□□ 0.41
ATG4B-224ENST00000494132 FAM227BQ96M60 508 aa17.59■□□□□ 0.41
ATG4B-224ENST00000494132 P2RX7Q99572 595 aaKnown RBP17.59■□□□□ 0.41
ATG4B-224ENST00000494132 PLXNB2O15031 1838 aa17.58■□□□□ 0.41
ATG4B-224ENST00000494132 COL11A1P12107 1806 aaPredicted RBP17.58■□□□□ 0.41
ATG4B-224ENST00000494132 MYPNQ86TC9 1320 aa17.58■□□□□ 0.4
ATG4B-224ENST00000494132 PATL2C9JE40 543 aaKnown RBP17.58■□□□□ 0.4
ATG4B-224ENST00000494132 PRDM1O75626 825 aa17.58■□□□□ 0.4
ATG4B-224ENST00000494132 PDE4AP27815 886 aa17.58■□□□□ 0.4
ATG4B-224ENST00000494132 HOXA7P31268 230 aaPredicted RBP17.58■□□□□ 0.4
ATG4B-224ENST00000494132 ATP2B2Q01814 1243 aa17.58■□□□□ 0.4
ATG4B-224ENST00000494132 SBK1Q52WX2 424 aa17.58■□□□□ 0.4
ATG4B-224ENST00000494132 VPS53Q5VIR6 699 aa17.58■□□□□ 0.4
ATG4B-224ENST00000494132 CENPFP49454 3210 aa17.58■□□□□ 0.4
ATG4B-224ENST00000494132 RBBP6Q7Z6E9 1792 aaKnown RBP17.58■□□□□ 0.4
ATG4B-224ENST00000494132 FOXP2O15409 715 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 VCAM1P19320 739 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 USP14P54578 494 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 FCGRTP55899 365 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 HERVK_113P62684 666 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 ICA1Q05084 483 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 PRKCZQ05513 592 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 NMIQ13287 307 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-224ENST00000494132 FAM110CQ1W6H9 321 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 GIMAP6Q6P9H5 292 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 SH3TC2Q8TF17 1288 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 C12orf42Q96LP6 360 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 PAGR1Q9BTK6 254 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 KIAA1683Q9H0B3 1180 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 NAPBQ9H115 298 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 TXNRD2Q9NNW7 524 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 SRRDQ9UH36 339 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 GABRQQ9UN88 632 aa17.57■□□□□ 0.4
ATG4B-224ENST00000494132 ROBO3Q96MS0 1386 aa17.56■□□□□ 0.4
ATG4B-224ENST00000494132 TNPO2O14787 897 aaKnown RBP17.56■□□□□ 0.4
ATG4B-224ENST00000494132 GCLCP48506 637 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-224ENST00000494132 SLC9C1Q4G0N8 1177 aa17.56■□□□□ 0.4
ATG4B-224ENST00000494132 KIAA1755Q5JYT7 1200 aa17.56■□□□□ 0.4
ATG4B-224ENST00000494132 SIAH1Q8IUQ4 282 aa17.56■□□□□ 0.4
ATG4B-224ENST00000494132 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
ATG4B-224ENST00000494132 RASA1P20936 1047 aa17.55■□□□□ 0.4
ATG4B-224ENST00000494132 POTEEQ6S8J3 1075 aa17.55■□□□□ 0.4
ATG4B-224ENST00000494132 ZNF589Q86UQ0 364 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-224ENST00000494132 SPICE1Q8N0Z3 855 aa17.55■□□□□ 0.4
ATG4B-224ENST00000494132 RAET1EQ8TD07 263 aa17.55■□□□□ 0.4
ATG4B-224ENST00000494132 CCDC17Q96LX7 622 aa17.55■□□□□ 0.4
ATG4B-224ENST00000494132 NACAP1Q9BZK3 213 aa17.55■□□□□ 0.4
ATG4B-224ENST00000494132 OSBPL3Q9H4L5 887 aa17.55■□□□□ 0.4
ATG4B-224ENST00000494132 RPAP3Q9H6T3 665 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-224ENST00000494132 HELLSQ9NRZ9 838 aa17.55■□□□□ 0.4
ATG4B-224ENST00000494132 TAOK2Q9UL54 1235 aa17.55■□□□□ 0.4
ATG4B-224ENST00000494132 USP17L15C9J2P7 530 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 USP17L13C9JLJ4 530 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 USP17L11C9JVI0 530 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 USP17L18D6R9N7 530 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 USP17L22D6RA61 530 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 USP17L17D6RBQ6 530 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 USP17L19D6RCP7 530 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 USP17L20D6RJB6 530 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 GNRH1P01148 92 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 EEF2P13639 858 aaKnown RBP17.54■□□□□ 0.4
ATG4B-224ENST00000494132 HOXD10P28358 340 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 PPARAQ07869 468 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 USP17L24Q0WX57 530 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.54■□□□□ 0.4
ATG4B-224ENST00000494132 ARHGEF10LQ9HCE6 1279 aa17.54■□□□□ 0.4
ATG4B-224ENST00000494132 A0A0G2JMZ2 1700 aa17.53■□□□□ 0.4
ATG4B-224ENST00000494132 RAD21O60216 631 aa17.53■□□□□ 0.4
ATG4B-224ENST00000494132 SDSP20132 328 aa17.53■□□□□ 0.4
ATG4B-224ENST00000494132 CTDSPL2Q05D32 466 aa17.53■□□□□ 0.4
ATG4B-224ENST00000494132 Q3C1V9 767 aa17.53■□□□□ 0.4
ATG4B-224ENST00000494132 MCMDC2Q4G0Z9 681 aa17.53■□□□□ 0.4
ATG4B-224ENST00000494132 SAMD1Q6SPF0 538 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-224ENST00000494132 CATSPERGQ6ZRH7 1159 aa17.53■□□□□ 0.4
ATG4B-224ENST00000494132 ARMC5Q96C12 935 aa17.53■□□□□ 0.4
ATG4B-224ENST00000494132 TANGO6Q9C0B7 1094 aa17.53■□□□□ 0.4
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