RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 PARP14Q460N5 1801 aa13.96□□□□□ -0.17
UBA3-211ENST00000493957 MINDY4BA8MYZ0 360 aa13.95□□□□□ -0.18
UBA3-211ENST00000493957 PATL2C9JE40 543 aaKnown RBP13.95□□□□□ -0.18
UBA3-211ENST00000493957 BTBD19C9JJ37 291 aa13.95□□□□□ -0.18
UBA3-211ENST00000493957 GNAT2P19087 354 aa13.95□□□□□ -0.18
UBA3-211ENST00000493957 GUCY1A2P33402 732 aa13.95□□□□□ -0.18
UBA3-211ENST00000493957 IRX5P78411 483 aaPredicted RBP13.95□□□□□ -0.18
UBA3-211ENST00000493957 SPP2Q13103 211 aa13.95□□□□□ -0.18
UBA3-211ENST00000493957 CLEC10AQ8IUN9 316 aa13.95□□□□□ -0.18
UBA3-211ENST00000493957 SAGE1Q9NXZ1 904 aa13.95□□□□□ -0.18
UBA3-211ENST00000493957 ARPP21Q9UBL0 812 aaPredicted RBP13.95□□□□□ -0.18
UBA3-211ENST00000493957 DOCK3Q8IZD9 2030 aa13.95□□□□□ -0.18
UBA3-211ENST00000493957 ROBO3Q96MS0 1386 aa13.95□□□□□ -0.18
UBA3-211ENST00000493957 A0A0G2JLL6 359 aaPredicted RBP13.94□□□□□ -0.18
UBA3-211ENST00000493957 USP17L5A8MUK1 530 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 CA12O43570 354 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 CETPP11597 493 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 AKR1B1P15121 316 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 CDK8P49336 464 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 CRHR2Q13324 411 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 CERKLQ49MI3 558 aaPredicted RBP13.94□□□□□ -0.18
UBA3-211ENST00000493957 MCMDC2Q4G0Z9 681 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 SBK1Q52WX2 424 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 COL13A1Q5TAT6 717 aaPredicted RBP13.94□□□□□ -0.18
UBA3-211ENST00000493957 GPAT2Q6NUI2 795 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 GIMAP6Q6P9H5 292 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 CWC27Q6UX04 472 aaKnown RBP13.94□□□□□ -0.18
UBA3-211ENST00000493957 C16orf86Q6ZW13 317 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 PRRT2Q7Z6L0 340 aaPredicted RBP13.94□□□□□ -0.18
UBA3-211ENST00000493957 DDRGK1Q96HY6 314 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 TACC3Q9Y6A5 838 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 RLFQ13129 1914 aa13.94□□□□□ -0.18
UBA3-211ENST00000493957 CCDC171Q6TFL3 1326 aa13.93□□□□□ -0.18
UBA3-211ENST00000493957 CXCL11O14625 94 aa13.93□□□□□ -0.18
UBA3-211ENST00000493957 ASNSP08243 561 aa13.93□□□□□ -0.18
UBA3-211ENST00000493957 INHBEP58166 350 aa13.93□□□□□ -0.18
UBA3-211ENST00000493957 SEPT2Q15019 361 aa13.93□□□□□ -0.18
UBA3-211ENST00000493957 ABCB5Q2M3G0 1257 aa13.93□□□□□ -0.18
UBA3-211ENST00000493957 GADL1Q6ZQY3 521 aa13.93□□□□□ -0.18
UBA3-211ENST00000493957 ZNF280CQ8ND82 737 aa13.93□□□□□ -0.18
UBA3-211ENST00000493957 DIAPH3Q9NSV4 1193 aa13.93□□□□□ -0.18
UBA3-211ENST00000493957 MPHOSPH10O00566 681 aaKnown RBP13.92□□□□□ -0.18
UBA3-211ENST00000493957 HSPD1P10809 573 aaKnown RBP13.92□□□□□ -0.18
UBA3-211ENST00000493957 HMGCS2P54868 508 aa13.92□□□□□ -0.18
UBA3-211ENST00000493957 CTDSPL2Q05D32 466 aa13.92□□□□□ -0.18
UBA3-211ENST00000493957 MTMR2Q13614 643 aa13.92□□□□□ -0.18
UBA3-211ENST00000493957 RAB3GAP1Q15042 981 aa13.92□□□□□ -0.18
UBA3-211ENST00000493957 TREML2Q5T2D2 321 aa13.92□□□□□ -0.18
UBA3-211ENST00000493957 AMOTL1Q8IY63 956 aa13.92□□□□□ -0.18
UBA3-211ENST00000493957 ACER1Q8TDN7 264 aa13.92□□□□□ -0.18
UBA3-211ENST00000493957 WDR18Q9BV38 432 aa13.92□□□□□ -0.18
UBA3-211ENST00000493957 NAPBQ9H115 298 aa13.92□□□□□ -0.18
UBA3-211ENST00000493957 INCENPQ9NQS7 918 aa13.92□□□□□ -0.18
UBA3-211ENST00000493957 SWAP70Q9UH65 585 aa13.92□□□□□ -0.18
UBA3-211ENST00000493957 COL11A1P12107 1806 aaPredicted RBP13.92□□□□□ -0.18
UBA3-211ENST00000493957 PDHXO00330 501 aa13.91□□□□□ -0.18
UBA3-211ENST00000493957 PRDM1O75626 825 aa13.91□□□□□ -0.18
UBA3-211ENST00000493957 RASA1P20936 1047 aa13.91□□□□□ -0.18
UBA3-211ENST00000493957 CHMLP26374 656 aa13.91□□□□□ -0.18
UBA3-211ENST00000493957 PPARAQ07869 468 aa13.91□□□□□ -0.18
UBA3-211ENST00000493957 TAF1CQ15572 869 aaPredicted RBP13.91□□□□□ -0.18
UBA3-211ENST00000493957 ZYXQ15942 572 aaKnown RBP13.91□□□□□ -0.18
UBA3-211ENST00000493957 TICAM2Q86XR7 235 aa13.91□□□□□ -0.18
UBA3-211ENST00000493957 CFHR5Q9BXR6 569 aa13.91□□□□□ -0.18
UBA3-211ENST00000493957 NACAP1Q9BZK3 213 aa13.91□□□□□ -0.18
UBA3-211ENST00000493957 PRDM10Q9NQV6 1147 aa13.91□□□□□ -0.18
UBA3-211ENST00000493957 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
UBA3-211ENST00000493957 GPR25O00155 361 aa13.9□□□□□ -0.18
UBA3-211ENST00000493957 ALDH1A1P00352 501 aa13.9□□□□□ -0.18
UBA3-211ENST00000493957 FGAP02671 866 aa13.9□□□□□ -0.18
UBA3-211ENST00000493957 CAP1Q01518 475 aa13.9□□□□□ -0.18
UBA3-211ENST00000493957 ANKRD23Q86SG2 305 aa13.9□□□□□ -0.18
UBA3-211ENST00000493957 ZNF296Q8WUU4 475 aaPredicted RBP13.9□□□□□ -0.18
UBA3-211ENST00000493957 MARVELD3Q96A59 401 aa13.9□□□□□ -0.18
UBA3-211ENST00000493957 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.9□□□□□ -0.18
UBA3-211ENST00000493957 AS3MTQ9HBK9 375 aa13.9□□□□□ -0.18
UBA3-211ENST00000493957 GINM1Q9NU53 330 aa13.9□□□□□ -0.18
UBA3-211ENST00000493957 ADGRA2Q96PE1 1338 aa13.9□□□□□ -0.19
UBA3-211ENST00000493957 A0A1W2PRG0 241 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 HIP1O00291 1037 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 SNPHO15079 494 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 CYP2C8P10632 490 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 BACE1P56817 501 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 HAND2P61296 217 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 ALX1Q15699 326 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 SH3D19Q5HYK7 790 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 OTUD7BQ6GQQ9 843 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 SIAH1Q8IUQ4 282 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 NKX2-3Q8TAU0 364 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 NBPF3Q9H094 633 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 CABP5Q9NP86 173 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 EMILIN3Q9NT22 766 aa13.89□□□□□ -0.19
UBA3-211ENST00000493957 USP17L10C9JJH3 530 aa13.88□□□□□ -0.19
UBA3-211ENST00000493957 KIAA1755Q5JYT7 1200 aa13.88□□□□□ -0.19
UBA3-211ENST00000493957 TMEM179Q6ZVK1 233 aa13.88□□□□□ -0.19
UBA3-211ENST00000493957 FASTKD5Q7L8L6 764 aaKnown RBP13.88□□□□□ -0.19
UBA3-211ENST00000493957 FEZ1Q99689 392 aa13.88□□□□□ -0.19
UBA3-211ENST00000493957 TBC1D2Q9BYX2 928 aa13.88□□□□□ -0.19
UBA3-211ENST00000493957 AGTPBP1Q9UPW5 1226 aa13.88□□□□□ -0.19
UBA3-211ENST00000493957 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms