RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 STX8Q9UNK0 236 aa8.95□□□□□ -0.98
VEGFA-214ENST00000493786 SNX14Q9Y5W7 946 aa8.95□□□□□ -0.98
VEGFA-214ENST00000493786 SIPA1L1O43166 1804 aa8.95□□□□□ -0.98
VEGFA-214ENST00000493786 LAMA4Q16363 1823 aa8.95□□□□□ -0.98
VEGFA-214ENST00000493786 PLIN4Q96Q06 1357 aa8.95□□□□□ -0.98
VEGFA-214ENST00000493786 USP17L10C9JJH3 530 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 IFIT3O14879 490 aaKnown RBP8.94□□□□□ -0.98
VEGFA-214ENST00000493786 PRC1O43663 620 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 CETPP11597 493 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 CASTP20810 708 aaKnown RBP8.94□□□□□ -0.98
VEGFA-214ENST00000493786 GTF2A2P52657 109 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 SREBF2Q12772 1141 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 SPP2Q13103 211 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 NOGQ13253 232 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 SPRYD7Q5W111 196 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 CYP4F22Q6NT55 531 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 BLOC1S2Q6QNY1 142 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 STOX1Q6ZVD7 989 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 RASAL3Q86YV0 1011 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 RASEFQ8IZ41 740 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 KCNB2Q92953 911 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 CEP95Q96GE4 821 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 CAPNS2Q96L46 248 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 ZSCAN10Q96SZ4 725 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-214ENST00000493786 WDR18Q9BV38 432 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 GOPCQ9HD26 462 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 TCP11L1Q9NUJ3 509 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 MTMR4Q9NYA4 1195 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 TMOD4Q9NZQ9 345 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 ZSWIM5Q9P217 1185 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 NYAP2Q9P242 653 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-214ENST00000493786 CLIP2Q9UDT6 1046 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 TACC3Q9Y6A5 838 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 DOCK1Q14185 1865 aa8.94□□□□□ -0.98
VEGFA-214ENST00000493786 MANSC4A6NHS7 340 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-214ENST00000493786 C19orf81C9J6K1 198 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 CXCL11O14625 94 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 IRF6O14896 467 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 EEF2P13639 858 aaKnown RBP8.93□□□□□ -0.98
VEGFA-214ENST00000493786 GUCY1A2P33402 732 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 JAG1P78504 1218 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 MTMR2Q13614 643 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 WTAPQ15007 396 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 ZYXQ15942 572 aaKnown RBP8.93□□□□□ -0.98
VEGFA-214ENST00000493786 SHROOM1Q2M3G4 852 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-214ENST00000493786 TMEM67Q5HYA8 995 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 IFIT1BQ5T764 474 aaKnown RBP8.93□□□□□ -0.98
VEGFA-214ENST00000493786 OTUD7BQ6GQQ9 843 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 USP17L2Q6R6M4 530 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 NFXL1Q6ZNB6 911 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 GADL1Q6ZQY3 521 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 DHX32Q7L7V1 743 aaKnown RBP8.93□□□□□ -0.98
VEGFA-214ENST00000493786 FASTKD5Q7L8L6 764 aaKnown RBP8.93□□□□□ -0.98
VEGFA-214ENST00000493786 CCDC84Q86UT8 332 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-214ENST00000493786 DGKHQ86XP1 1220 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 MB21D2Q8IYB1 491 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-214ENST00000493786 REM2Q8IYK8 340 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-214ENST00000493786 CNKSR2Q8WXI2 1034 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 TMEM87BQ96K49 555 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 TTC14Q96N46 770 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 ZKSCAN3Q9BRR0 538 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 MTA3Q9BTC8 594 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 KAT14Q9H8E8 782 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 ISY1Q9ULR0 285 aaKnown RBP8.93□□□□□ -0.98
VEGFA-214ENST00000493786 SYNPO2Q9UMS6 1093 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 AFG3L2Q9Y4W6 797 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 CYP46A1Q9Y6A2 500 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 TAF6LQ9Y6J9 622 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 TNKSO95271 1327 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 WDR19Q8NEZ3 1342 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 MYH8P13535 1937 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 OTOFQ9HC10 1997 aa8.93□□□□□ -0.98
VEGFA-214ENST00000493786 WDR33Q9C0J8 1336 aaKnown RBP8.92□□□□□ -0.98
VEGFA-214ENST00000493786 CCL15-CCL14A0A0B4J2E2 113 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 IGKV6D-41A0A0C4DH26 115 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 CCDC69A6NI79 296 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 NMT2O60551 498 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 TOP1P11387 765 aaKnown RBP8.92□□□□□ -0.98
VEGFA-214ENST00000493786 HMGCS2P54868 508 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 BACE1P56817 501 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 INHBEP58166 350 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 HTRA3P83110 453 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 PABPC4Q13310 644 aaKnown RBP eCLIP8.92□□□□□ -0.986e-13■■■■■ 112.3
VEGFA-214ENST00000493786 CCL15Q16663 113 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 ADCK5Q3MIX3 580 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 SYNE3Q6ZMZ3 975 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 CYB5R4Q7L1T6 521 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 CHST3Q7LGC8 479 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 CLEC10AQ8IUN9 316 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 TMTC2Q8N394 836 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.92□□□□□ -0.98
VEGFA-214ENST00000493786 TM6SF1Q9BZW5 370 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 KIAA1683Q9H0B3 1180 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 KCNH4Q9UQ05 1017 aa8.92□□□□□ -0.98
VEGFA-214ENST00000493786 A0A0G2JLL6 359 aaPredicted RBP8.91□□□□□ -0.98
VEGFA-214ENST00000493786 FAM155AB1AL88 458 aaPredicted RBP8.91□□□□□ -0.98
VEGFA-214ENST00000493786 RPS6KB1P23443 525 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 GJA5P36382 358 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 RBM25P49756 843 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms