RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 GUCY1A2P33402 732 aa13.16□□□□□ -0.3
CPSF7-212ENST00000489728 MTMR2Q13614 643 aa13.16□□□□□ -0.3
CPSF7-212ENST00000489728 RAB3GAP1Q15042 981 aa13.16□□□□□ -0.3
CPSF7-212ENST00000489728 USP17L2Q6R6M4 530 aa13.16□□□□□ -0.3
CPSF7-212ENST00000489728 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-212ENST00000489728 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
CPSF7-212ENST00000489728 PARK7Q99497 189 aaKnown RBP13.16□□□□□ -0.3
CPSF7-212ENST00000489728 RNF41Q9H4P4 317 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-212ENST00000489728 ZFYVE28Q9HCC9 887 aa13.16□□□□□ -0.3
CPSF7-212ENST00000489728 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
CPSF7-212ENST00000489728 TMOD4Q9NZQ9 345 aa13.16□□□□□ -0.3
CPSF7-212ENST00000489728 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-212ENST00000489728 PNMA3Q9UL41 463 aa13.16□□□□□ -0.3
CPSF7-212ENST00000489728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
CPSF7-212ENST00000489728 CDC45O75419 566 aa13.15□□□□□ -0.3
CPSF7-212ENST00000489728 AKR1B1P15121 316 aa13.15□□□□□ -0.3
CPSF7-212ENST00000489728 ICA1Q05084 483 aa13.15□□□□□ -0.3
CPSF7-212ENST00000489728 SEPT2Q15019 361 aa13.15□□□□□ -0.3
CPSF7-212ENST00000489728 TAF1CQ15572 869 aaPredicted RBP13.15□□□□□ -0.3
CPSF7-212ENST00000489728 SHROOM1Q2M3G4 852 aaPredicted RBP13.15□□□□□ -0.3
CPSF7-212ENST00000489728 GPAT2Q6NUI2 795 aa13.15□□□□□ -0.3
CPSF7-212ENST00000489728 GADL1Q6ZQY3 521 aa13.15□□□□□ -0.3
CPSF7-212ENST00000489728 CCDC84Q86UT8 332 aaPredicted RBP13.15□□□□□ -0.3
CPSF7-212ENST00000489728 STAG1Q8WVM7 1258 aa13.15□□□□□ -0.3
CPSF7-212ENST00000489728 FEZ1Q99689 392 aa13.15□□□□□ -0.3
CPSF7-212ENST00000489728 SMIM22K7EJ46 135 aa13.14□□□□□ -0.31
CPSF7-212ENST00000489728 PDHXO00330 501 aa13.14□□□□□ -0.31
CPSF7-212ENST00000489728 ZNF213O14771 459 aa13.14□□□□□ -0.31
CPSF7-212ENST00000489728 HOXA7P31268 230 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-212ENST00000489728 HMGCS2P54868 508 aa13.14□□□□□ -0.31
CPSF7-212ENST00000489728 CRHR2Q13324 411 aa13.14□□□□□ -0.31
CPSF7-212ENST00000489728 IMMTQ16891 758 aaKnown RBP13.14□□□□□ -0.31
CPSF7-212ENST00000489728 NEDD1Q8NHV4 660 aa13.14□□□□□ -0.31
CPSF7-212ENST00000489728 LPAR1Q92633 364 aa13.14□□□□□ -0.31
CPSF7-212ENST00000489728 ESYT1Q9BSJ8 1104 aa13.14□□□□□ -0.31
CPSF7-212ENST00000489728 IL25Q9H293 177 aa13.14□□□□□ -0.31
CPSF7-212ENST00000489728 TMX2Q9Y320 296 aa13.14□□□□□ -0.31
CPSF7-212ENST00000489728 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-212ENST00000489728 IGKV6D-41A0A0C4DH26 115 aa13.13□□□□□ -0.31
CPSF7-212ENST00000489728 TLR2O60603 784 aa13.13□□□□□ -0.31
CPSF7-212ENST00000489728 TSPY3P0CV98 308 aa13.13□□□□□ -0.31
CPSF7-212ENST00000489728 TSPY8P0CW00 308 aa13.13□□□□□ -0.31
CPSF7-212ENST00000489728 LBX1P52954 281 aa13.13□□□□□ -0.31
CPSF7-212ENST00000489728 AKNAD1Q5T1N1 836 aa13.13□□□□□ -0.31
CPSF7-212ENST00000489728 KIAA1211Q6ZU35 1233 aa13.13□□□□□ -0.31
CPSF7-212ENST00000489728 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
CPSF7-212ENST00000489728 GTF3C2Q8WUA4 911 aaPredicted RBP13.13□□□□□ -0.31
CPSF7-212ENST00000489728 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
CPSF7-212ENST00000489728 NYAP2Q9P242 653 aa13.13□□□□□ -0.31
CPSF7-212ENST00000489728 ADGRA2Q96PE1 1338 aa13.13□□□□□ -0.31
CPSF7-212ENST00000489728 GPR25O00155 361 aa13.12□□□□□ -0.31
CPSF7-212ENST00000489728 TBC1D8O95759 1140 aa13.12□□□□□ -0.31
CPSF7-212ENST00000489728 OSBPP22059 807 aa13.12□□□□□ -0.31
CPSF7-212ENST00000489728 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
CPSF7-212ENST00000489728 MFSD6Q6ZSS7 791 aa13.12□□□□□ -0.31
CPSF7-212ENST00000489728 MAP4K1Q92918 833 aa13.12□□□□□ -0.31
CPSF7-212ENST00000489728 NBPF3Q9H094 633 aa13.12□□□□□ -0.31
CPSF7-212ENST00000489728 CNNM2Q9H8M5 875 aa13.12□□□□□ -0.31
CPSF7-212ENST00000489728 EMILIN3Q9NT22 766 aa13.12□□□□□ -0.31
CPSF7-212ENST00000489728 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 TSPY2A6NKD2 308 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 FKTNO75072 461 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 PRDM1O75626 825 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 TTLL1O95922 423 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 VCAM1P19320 739 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 GCLCP48506 637 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-212ENST00000489728 NOVP48745 357 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 TFAP4Q01664 338 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 TREML2Q5T2D2 321 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 SIAH1Q8IUQ4 282 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 ACER1Q8TDN7 264 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 ESR2Q92731 530 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 MKL1Q969V6 931 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 VCPKMTQ9H867 229 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 TCP11L1Q9NUJ3 509 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 MTMR4Q9NYA4 1195 aa13.11□□□□□ -0.31
CPSF7-212ENST00000489728 USP17L15C9J2P7 530 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 USP17L13C9JLJ4 530 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 USP17L11C9JVI0 530 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 USP17L18D6R9N7 530 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 USP17L22D6RA61 530 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 USP17L17D6RBQ6 530 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 USP17L19D6RCP7 530 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 USP17L20D6RJB6 530 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 WDR46O15213 610 aaKnown RBP13.1□□□□□ -0.31
CPSF7-212ENST00000489728 EEF2P13639 858 aaKnown RBP13.1□□□□□ -0.31
CPSF7-212ENST00000489728 HAND2P61296 217 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-212ENST00000489728 USP17L24Q0WX57 530 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 ARHGEF6Q15052 776 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 CCDC178Q5BJE1 867 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 C17orf99Q6UX52 265 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 STK11IPQ8N1F8 1099 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-212ENST00000489728 ZNF296Q8WUU4 475 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-212ENST00000489728 CEP95Q96GE4 821 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 ERO1AQ96HE7 468 aa13.1□□□□□ -0.31
CPSF7-212ENST00000489728 KRT23Q9C075 422 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms