RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 SMYD4Q8IYR2 804 aaPredicted RBP5.73□□□□□ -1.49
KDM3A-213ENST00000488971 GATAD2BQ8WXI9 593 aa5.73□□□□□ -1.49
KDM3A-213ENST00000488971 RNPC3Q96LT9 517 aaKnown RBP5.73□□□□□ -1.49
KDM3A-213ENST00000488971 DEPDC7Q96QD5 511 aa5.73□□□□□ -1.49
KDM3A-213ENST00000488971 SSU72Q9NP77 194 aaKnown RBP5.73□□□□□ -1.49
KDM3A-213ENST00000488971 MSRB2Q9Y3D2 182 aa5.73□□□□□ -1.49
KDM3A-213ENST00000488971 ZNF862O60290 1169 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 GSTP1P09211 210 aaKnown RBP5.72□□□□□ -1.49
KDM3A-213ENST00000488971 CD8BP10966 210 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 FUT4P22083 530 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 GIPRP48546 466 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 PPP2R3AQ06190 1150 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 SEZ6Q53EL9 994 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 BNC2Q6ZN30 1099 aaPredicted RBP5.72□□□□□ -1.49
KDM3A-213ENST00000488971 REXO1Q8N1G1 1221 aaKnown RBP5.72□□□□□ -1.49
KDM3A-213ENST00000488971 PI4K2BQ8TCG2 481 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 KCNB2Q92953 911 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 BRINP2Q9C0B6 783 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 CCDC113Q9H0I3 377 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 MIR1-1HGQ9H1L0 117 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 GPN3Q9UHW5 284 aaPredicted RBP5.72□□□□□ -1.49
KDM3A-213ENST00000488971 VAV3Q9UKW4 847 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 PPT2Q9UMR5 302 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 CYP8B1Q9UNU6 501 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 R3HCC1Q9Y3T6 440 aaKnown RBP5.72□□□□□ -1.49
KDM3A-213ENST00000488971 SAMM50Q9Y512 469 aa5.72□□□□□ -1.49
KDM3A-213ENST00000488971 FAM221BA6H8Z2 402 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 SMAD7O15105 426 aaKnown RBP5.71□□□□□ -1.5
KDM3A-213ENST00000488971 CILPO75339 1184 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 HCLS1P14317 486 aaPredicted RBP5.71□□□□□ -1.5
KDM3A-213ENST00000488971 BMP6P22004 513 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 EIF6P56537 245 aaKnown RBP5.71□□□□□ -1.5
KDM3A-213ENST00000488971 PRKCQQ04759 706 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 TTLL4Q14679 1199 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 AOC3Q16853 763 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 CWF19L2Q2TBE0 894 aaKnown RBP5.71□□□□□ -1.5
KDM3A-213ENST00000488971 PLEKHG4Q58EX7 1191 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 CCDC81Q6ZN84 652 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 ATG4DQ86TL0 474 aaPredicted RBP5.71□□□□□ -1.5
KDM3A-213ENST00000488971 WFDC3Q8IUB2 231 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 FAM169BQ8N8A8 192 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 OR6P1Q8NGX9 317 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 FBXO27Q8NI29 283 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 FAM168AQ92567 244 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 GPATCH3Q96I76 525 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 DISC1Q9NRI5 854 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 PCOLCE2Q9UKZ9 415 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 CARMIL2Q6F5E8 1435 aa5.71□□□□□ -1.5
KDM3A-213ENST00000488971 LEFTY1O75610 366 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 RNASE1P07998 156 aaKnown RBP5.7□□□□□ -1.5
KDM3A-213ENST00000488971 IMPDH2P12268 514 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 LMNB1P20700 586 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 NME2P22392 152 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 CD96P40200 585 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 ZNF165P49910 485 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 ZNF124Q15973 351 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 PKN1Q16512 942 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 IFI16Q16666 785 aaKnown RBP5.7□□□□□ -1.5
KDM3A-213ENST00000488971 PTPROQ16827 1216 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 KIF4BQ2VIQ3 1234 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 RASIP1Q5U651 963 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 SCARA3Q6AZY7 606 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 REC114Q7Z4M0 266 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 RBBP8NLQ8NC74 664 aaPredicted RBP5.7□□□□□ -1.5
KDM3A-213ENST00000488971 HRASLS5Q96KN8 279 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 KRT82Q9NSB4 513 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 MBNL3Q9NUK0 354 aaKnown RBP5.7□□□□□ -1.5
KDM3A-213ENST00000488971 ZNRF3Q9ULT6 936 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 PCDHB5Q9Y5E4 795 aa5.7□□□□□ -1.5
KDM3A-213ENST00000488971 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.7□□□□□ -1.5
KDM3A-213ENST00000488971 TMEM265A0A087WTH1 108 aa5.69□□□□□ -1.5
KDM3A-213ENST00000488971 TLR3O15455 904 aaKnown RBP5.69□□□□□ -1.5
KDM3A-213ENST00000488971 FARP2O94887 1054 aaPredicted RBP5.69□□□□□ -1.5
KDM3A-213ENST00000488971 ITIH2P19823 946 aa5.69□□□□□ -1.5
KDM3A-213ENST00000488971 LRRC14Q15048 493 aa5.69□□□□□ -1.5
KDM3A-213ENST00000488971 DDR2Q16832 855 aa5.69□□□□□ -1.5
KDM3A-213ENST00000488971 RNF187Q5TA31 235 aaPredicted RBP5.69□□□□□ -1.5
KDM3A-213ENST00000488971 DIEXFQ68CQ4 756 aaKnown RBP5.69□□□□□ -1.5
KDM3A-213ENST00000488971 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.69□□□□□ -1.5
KDM3A-213ENST00000488971 TOP6BLQ8N6T0 577 aa5.69□□□□□ -1.5
KDM3A-213ENST00000488971 CELF2-AS1Q8N7Q2 184 aa5.69□□□□□ -1.5
KDM3A-213ENST00000488971 FERD3LQ96RJ6 166 aa5.69□□□□□ -1.5
KDM3A-213ENST00000488971 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
KDM3A-213ENST00000488971 ACTR10Q9NZ32 417 aa5.69□□□□□ -1.5
KDM3A-213ENST00000488971 CEACAM5P06731 702 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 MCM4P33991 863 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 CASP7P55210 303 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 RASGRF1Q13972 1273 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 ANGEL2Q5VTE6 544 aaKnown RBP5.68□□□□□ -1.5
KDM3A-213ENST00000488971 LLGL2Q6P1M3 1020 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 KSR1Q8IVT5 923 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 SULF2Q8IWU5 870 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 LRRN4CLQ8ND94 238 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 ZCRB1Q8TBF4 217 aaKnown RBP5.68□□□□□ -1.5
KDM3A-213ENST00000488971 JARID2Q92833 1246 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-213ENST00000488971 GAL3ST3Q96A11 431 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 CRBNQ96SW2 442 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 SLC38A3Q99624 504 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 DUSP23Q9BVJ7 150 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 TMX1Q9H3N1 280 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms