RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 USP14P54578 494 aa18.88■□□□□ 0.61
HDAC7-224ENST00000488927 BACE1P56817 501 aa18.88■□□□□ 0.61
HDAC7-224ENST00000488927 TFAP4Q01664 338 aa18.88■□□□□ 0.61
HDAC7-224ENST00000488927 ICA1Q05084 483 aa18.88■□□□□ 0.61
HDAC7-224ENST00000488927 TRDNQ13061 729 aa18.88■□□□□ 0.61
HDAC7-224ENST00000488927 CCL15Q16663 113 aa18.88■□□□□ 0.61
HDAC7-224ENST00000488927 SHROOM1Q2M3G4 852 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-224ENST00000488927 PRRT2Q7Z6L0 340 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-224ENST00000488927 JMYQ8N9B5 988 aa18.88■□□□□ 0.61
HDAC7-224ENST00000488927 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-224ENST00000488927 ALDH1A1P00352 501 aa18.87■□□□□ 0.61
HDAC7-224ENST00000488927 NECTIN1Q15223 517 aa18.87■□□□□ 0.61
HDAC7-224ENST00000488927 LAMA4Q16363 1823 aa18.87■□□□□ 0.61
HDAC7-224ENST00000488927 RRP12Q5JTH9 1297 aaKnown RBP18.87■□□□□ 0.61
HDAC7-224ENST00000488927 CEP350Q5VT06 3117 aa18.87■□□□□ 0.61
HDAC7-224ENST00000488927 CCDC84Q86UT8 332 aaPredicted RBP18.87■□□□□ 0.61
HDAC7-224ENST00000488927 ATAD5Q96QE3 1844 aa18.87■□□□□ 0.61
HDAC7-224ENST00000488927 FEZ1Q99689 392 aa18.87■□□□□ 0.61
HDAC7-224ENST00000488927 MYH8P13535 1937 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 ZKSCAN1P17029 563 aaPredicted RBP18.86■□□□□ 0.61
HDAC7-224ENST00000488927 CCDC178Q5BJE1 867 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 SH3D19Q5HYK7 790 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 FAM47AQ5JRC9 791 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 CREB3L3Q68CJ9 461 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 PROCA1Q8NCQ7 364 aaPredicted RBP18.86■□□□□ 0.61
HDAC7-224ENST00000488927 ZIC5Q96T25 663 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 BEGAINQ9BUH8 593 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.86■□□□□ 0.61
HDAC7-224ENST00000488927 KIAA1683Q9H0B3 1180 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 ZCCHC17Q9NP64 241 aaKnown RBP18.86■□□□□ 0.61
HDAC7-224ENST00000488927 INCENPQ9NQS7 918 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 TMOD4Q9NZQ9 345 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 NYAP2Q9P242 653 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 SYNPO2Q9UMS6 1093 aa18.86■□□□□ 0.61
HDAC7-224ENST00000488927 NEDD4P46934 1319 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 IGKV6D-41A0A0C4DH26 115 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 SLC27A2O14975 620 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 CA12O43570 354 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 TTLL1O95922 423 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 MTMR2Q13614 643 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 USP17L2Q6R6M4 530 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 RALYLQ86SE5 291 aaKnown RBP18.85■□□□□ 0.61
HDAC7-224ENST00000488927 IFNL1Q8IU54 200 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 BRI3BPQ8WY22 251 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 TCP11L1Q9NUJ3 509 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 MTMR4Q9NYA4 1195 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 TACC3Q9Y6A5 838 aa18.85■□□□□ 0.61
HDAC7-224ENST00000488927 E7EWF7 191 aa18.84■□□□□ 0.61
HDAC7-224ENST00000488927 EEF2P13639 858 aaKnown RBP18.84■□□□□ 0.61
HDAC7-224ENST00000488927 ANKRD23Q86SG2 305 aa18.84■□□□□ 0.61
HDAC7-224ENST00000488927 IQCA1Q86XH1 822 aa18.84■□□□□ 0.61
HDAC7-224ENST00000488927 NCOA7Q8NI08 942 aa18.84■□□□□ 0.61
HDAC7-224ENST00000488927 CEP95Q96GE4 821 aa18.84■□□□□ 0.61
HDAC7-224ENST00000488927 C12orf42Q96LP6 360 aa18.84■□□□□ 0.61
HDAC7-224ENST00000488927 SLC45A1Q9Y2W3 748 aa18.84■□□□□ 0.61
HDAC7-224ENST00000488927 TMX2Q9Y320 296 aa18.84■□□□□ 0.61
HDAC7-224ENST00000488927 KDM4AO75164 1064 aa18.83■□□□□ 0.6
HDAC7-224ENST00000488927 MCCP23508 829 aa18.83■□□□□ 0.6
HDAC7-224ENST00000488927 HMGCS2P54868 508 aa18.83■□□□□ 0.6
HDAC7-224ENST00000488927 ATP2B2Q01814 1243 aa18.83■□□□□ 0.6
HDAC7-224ENST00000488927 PABPC4Q13310 644 aaKnown RBP eCLIP18.83■□□□□ 0.6
HDAC7-224ENST00000488927 KRT32Q14532 448 aa18.83■□□□□ 0.6
HDAC7-224ENST00000488927 TSGA10IPQ3SY00 556 aa18.83■□□□□ 0.6
HDAC7-224ENST00000488927 GADL1Q6ZQY3 521 aa18.83■□□□□ 0.6
HDAC7-224ENST00000488927 ACER1Q8TDN7 264 aa18.83■□□□□ 0.6
HDAC7-224ENST00000488927 MKL1Q969V6 931 aa18.83■□□□□ 0.6
HDAC7-224ENST00000488927 SAGE1Q9NXZ1 904 aa18.83■□□□□ 0.6
HDAC7-224ENST00000488927 PHIPQ8WWQ0 1821 aa18.83■□□□□ 0.6
HDAC7-224ENST00000488927 B4E1Z4 1266 aa18.82■□□□□ 0.6
HDAC7-224ENST00000488927 HSPA4P34932 840 aa18.82■□□□□ 0.6
HDAC7-224ENST00000488927 MOGSQ13724 837 aa18.82■□□□□ 0.6
HDAC7-224ENST00000488927 SIAH1Q8IUQ4 282 aa18.82■□□□□ 0.6
HDAC7-224ENST00000488927 LPAR1Q92633 364 aa18.82■□□□□ 0.6
HDAC7-224ENST00000488927 TTC14Q96N46 770 aa18.82■□□□□ 0.6
HDAC7-224ENST00000488927 PTPN18Q99952 460 aa18.82■□□□□ 0.6
HDAC7-224ENST00000488927 GOPCQ9HD26 462 aa18.82■□□□□ 0.6
HDAC7-224ENST00000488927 WBP1LQ9NX94 342 aa18.82■□□□□ 0.6
HDAC7-224ENST00000488927 AGTPBP1Q9UPW5 1226 aa18.82■□□□□ 0.6
HDAC7-224ENST00000488927 GREB1LQ9C091 1923 aaPredicted RBP18.82■□□□□ 0.6
HDAC7-224ENST00000488927 A0A1W2PRG0 241 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 BTBD19C9JJ37 291 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 IGF2BP3O00425 579 aaKnown RBP eCLIP18.81■□□□□ 0.6
HDAC7-224ENST00000488927 NOVP48745 357 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 CLEC10AQ8IUN9 316 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 UBAC1Q9BSL1 405 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 USP26Q9BXU7 913 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 IL17RBQ9NRM6 502 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 EMILIN3Q9NT22 766 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 ZSWIM5Q9P217 1185 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 CLIP2Q9UDT6 1046 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 PNMA3Q9UL41 463 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 STX8Q9UNK0 236 aa18.81■□□□□ 0.6
HDAC7-224ENST00000488927 SART3Q15020 963 aaKnown RBP18.8■□□□□ 0.6
HDAC7-224ENST00000488927 DGKHQ86XP1 1220 aa18.8■□□□□ 0.6
HDAC7-224ENST00000488927 KCNB2Q92953 911 aa18.8■□□□□ 0.6
HDAC7-224ENST00000488927 MTA3Q9BTC8 594 aa18.8■□□□□ 0.6
HDAC7-224ENST00000488927 CFHR5Q9BXR6 569 aa18.8■□□□□ 0.6
HDAC7-224ENST00000488927 VCPKMTQ9H867 229 aa18.8■□□□□ 0.6
HDAC7-224ENST00000488927 PDHXO00330 501 aa18.79■□□□□ 0.6
HDAC7-224ENST00000488927 ZYXQ15942 572 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms